PBANKA_0814500 | protease, putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0814500OTHER0.6588850.3379860.003130
No Results

  • Fasta :-

    >PBANKA_0814500 MMYMVFISLCFNIICCIWIKGFKINKNSSIILHKYKKIEDHNKVNSFFLRKIKQTYTYKK FSVNLKPDDESVNNIKERKNIIKENIFNFYKKNIYLFSKILLYMKNGATFLTEKCTSSII PQLLISISFFFLHFYLLSKNFIILLPYQLIPNYSNILMGLDFNSTFFIFSSLFFLKNFIS NFQSFKTRLASNKFTIPLKENKKKNILTISVLFLTSYILSGYVSIYAEQILNYSKSVNFR ISDTTIKSLQILIGHFVWVGCSIKIFSKFLYPHFKNNISNLNFRYKDSWCFKVIYGYVCS HYIFNIIDLLNNTIINYFNNDDEIYIENSIDDIINEKKFLSTFLCVISPCFSAPFFEEFI YRFFVLKSLCLFMNIHYAVTFSSLLFAIHHLNIFNVIPLFFLSFFWSYIYIYTDNILITM IIHSFWNIYVFLSSLYN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0814500.fa Sequence name : PBANKA_0814500 Sequence length : 437 VALUES OF COMPUTED PARAMETERS Coef20 : 4.823 CoefTot : -1.303 ChDiff : 20 ZoneTo : 38 KR : 6 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.147 2.306 0.554 0.803 MesoH : 1.139 1.319 0.013 0.583 MuHd_075 : 15.241 15.868 6.241 4.848 MuHd_095 : 29.715 18.387 7.724 7.847 MuHd_100 : 30.130 17.344 10.852 6.480 MuHd_105 : 37.484 18.916 12.536 7.448 Hmax_075 : 6.067 14.583 4.117 5.378 Hmax_095 : 20.300 22.200 -0.776 7.270 Hmax_100 : 13.000 14.800 3.191 5.860 Hmax_105 : 5.100 6.700 0.232 2.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0496 0.9504 DFMC : 0.1227 0.8773 This protein is probably imported in chloroplast. f(Ser) = 0.0789 f(Arg) = 0.0000 CMi = 1.12782 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 437 PBANKA_0814500 MMYMVFISLCFNIICCIWIKGFKINKNSSIILHKYKKIEDHNKVNSFFLRKIKQTYTYKKFSVNLKPDDESVNNIKERKN 80 IIKENIFNFYKKNIYLFSKILLYMKNGATFLTEKCTSSIIPQLLISISFFFLHFYLLSKNFIILLPYQLIPNYSNILMGL 160 DFNSTFFIFSSLFFLKNFISNFQSFKTRLASNKFTIPLKENKKKNILTISVLFLTSYILSGYVSIYAEQILNYSKSVNFR 240 ISDTTIKSLQILIGHFVWVGCSIKIFSKFLYPHFKNNISNLNFRYKDSWCFKVIYGYVCSHYIFNIIDLLNNTIINYFNN 320 DDEIYIENSIDDIINEKKFLSTFLCVISPCFSAPFFEEFIYRFFVLKSLCLFMNIHYAVTFSSLLFAIHHLNIFNVIPLF 400 FLSFFWSYIYIYTDNILITMIIHSFWNIYVFLSSLYN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0814500 20 ICCIWIK|GF 0.064 . PBANKA_0814500 23 IWIKGFK|IN 0.056 . PBANKA_0814500 26 KGFKINK|NS 0.070 . PBANKA_0814500 34 SSIILHK|YK 0.070 . PBANKA_0814500 36 IILHKYK|KI 0.078 . PBANKA_0814500 37 ILHKYKK|IE 0.105 . PBANKA_0814500 43 KIEDHNK|VN 0.068 . PBANKA_0814500 50 VNSFFLR|KI 0.124 . PBANKA_0814500 51 NSFFLRK|IK 0.072 . PBANKA_0814500 53 FFLRKIK|QT 0.124 . PBANKA_0814500 59 KQTYTYK|KF 0.063 . PBANKA_0814500 60 QTYTYKK|FS 0.092 . PBANKA_0814500 66 KFSVNLK|PD 0.073 . PBANKA_0814500 76 ESVNNIK|ER 0.059 . PBANKA_0814500 78 VNNIKER|KN 0.147 . PBANKA_0814500 79 NNIKERK|NI 0.093 . PBANKA_0814500 83 ERKNIIK|EN 0.066 . PBANKA_0814500 91 NIFNFYK|KN 0.059 . PBANKA_0814500 92 IFNFYKK|NI 0.099 . PBANKA_0814500 99 NIYLFSK|IL 0.061 . PBANKA_0814500 105 KILLYMK|NG 0.056 . PBANKA_0814500 114 ATFLTEK|CT 0.073 . PBANKA_0814500 139 HFYLLSK|NF 0.060 . PBANKA_0814500 176 SSLFFLK|NF 0.065 . PBANKA_0814500 186 SNFQSFK|TR 0.060 . PBANKA_0814500 188 FQSFKTR|LA 0.178 . PBANKA_0814500 193 TRLASNK|FT 0.083 . PBANKA_0814500 199 KFTIPLK|EN 0.057 . PBANKA_0814500 202 IPLKENK|KK 0.062 . PBANKA_0814500 203 PLKENKK|KN 0.075 . PBANKA_0814500 204 LKENKKK|NI 0.137 . PBANKA_0814500 235 QILNYSK|SV 0.079 . PBANKA_0814500 240 SKSVNFR|IS 0.165 . PBANKA_0814500 247 ISDTTIK|SL 0.081 . PBANKA_0814500 264 WVGCSIK|IF 0.063 . PBANKA_0814500 268 SIKIFSK|FL 0.074 . PBANKA_0814500 275 FLYPHFK|NN 0.067 . PBANKA_0814500 284 ISNLNFR|YK 0.106 . PBANKA_0814500 286 NLNFRYK|DS 0.076 . PBANKA_0814500 292 KDSWCFK|VI 0.081 . PBANKA_0814500 337 DDIINEK|KF 0.053 . PBANKA_0814500 338 DIINEKK|FL 0.136 . PBANKA_0814500 362 FEEFIYR|FF 0.075 . PBANKA_0814500 367 YRFFVLK|SL 0.083 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0814500 ATGATGTATATGGTTTTTATTTCTTTATGCTTTAACATAATTTGTTGTATATGGATTAAA GGATTTAAAATAAACAAGAATAGTAGTATAATTTTACATAAATATAAAAAAATAGAAGAT CATAACAAAGTAAATTCATTTTTTTTAAGAAAAATAAAACAAACATACACATACAAAAAA TTTTCAGTTAATTTAAAACCAGATGATGAATCAGTAAATAATATAAAAGAGAGAAAAAAT ATTATAAAAGAAAATATATTTAATTTTTATAAAAAAAATATATATTTATTTTCAAAAATA TTATTATATATGAAAAATGGTGCAACTTTTCTAACGGAAAAGTGTACAAGTTCAATAATC CCCCAGCTTTTAATTTCTATATCCTTTTTTTTTTTACATTTTTATTTATTGTCTAAAAAT TTTATTATTTTATTACCCTACCAATTAATACCTAATTATTCGAATATTCTTATGGGCTTA GATTTTAATAGTACATTTTTTATATTTTCATCTTTATTTTTTTTAAAAAATTTTATATCA AACTTTCAAAGTTTTAAAACAAGATTAGCATCAAACAAATTTACAATACCTTTGAAAGAA AACAAGAAAAAAAACATTTTGACAATATCCGTTTTATTCCTTACTTCATATATATTATCA GGATATGTCTCGATATATGCTGAGCAGATATTGAATTATTCCAAATCTGTGAATTTTCGC ATTTCAGATACTACTATAAAATCTTTGCAAATATTAATTGGGCATTTCGTGTGGGTAGGA TGTAGTATTAAAATATTCAGCAAGTTTTTATATCCTCATTTCAAAAATAATATAAGTAAT TTAAATTTTCGATATAAAGATAGCTGGTGTTTTAAGGTTATATATGGATATGTATGCTCC CATTATATTTTTAATATTATAGATTTATTAAATAACACAATAATAAATTATTTTAATAAC GATGATGAAATATATATAGAAAATAGTATAGACGATATTATTAATGAAAAAAAATTTCTT TCTACATTTTTATGTGTAATTAGCCCATGCTTTAGTGCCCCATTTTTTGAAGAATTTATA TATAGATTTTTTGTTCTTAAAAGTTTATGTTTATTTATGAATATACATTATGCTGTTACA TTTTCATCATTACTTTTTGCTATTCATCATTTGAATATTTTTAATGTAATACCTTTATTT TTTTTATCTTTTTTTTGGTCTTATATATATATTTACACTGACAATATACTTATTACTATG ATTATTCATTCTTTTTGGAATATTTATGTTTTTTTATCGTCTTTATATAACTAA
  • Download Fasta

  • Fasta :-

    MMYMVFISLCFNIICCIWIKGFKINKNSSIILHKYKKIEDHNKVNSFFLRKIKQTYTYKK FSVNLKPDDESVNNIKERKNIIKENIFNFYKKNIYLFSKILLYMKNGATFLTEKCTSSII PQLLISISFFFLHFYLLSKNFIILLPYQLIPNYSNILMGLDFNSTFFIFSSLFFLKNFIS NFQSFKTRLASNKFTIPLKENKKKNILTISVLFLTSYILSGYVSIYAEQILNYSKSVNFR ISDTTIKSLQILIGHFVWVGCSIKIFSKFLYPHFKNNISNLNFRYKDSWCFKVIYGYVCS HYIFNIIDLLNNTIINYFNNDDEIYIENSIDDIINEKKFLSTFLCVISPCFSAPFFEEFI YRFFVLKSLCLFMNIHYAVTFSSLLFAIHHLNIFNVIPLFFLSFFWSYIYIYTDNILITM IIHSFWNIYVFLSSLYN

    No Results
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IDSitePeptideScoreMethod
PBANKA_0814500191 STRLASNKFT0.994unsp

PBANKA_081450      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India