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Computed_GO_Component_IDs:
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Computed_GO_Components:
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Computed_GO_Function_IDs:
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Computed_GO_Functions:
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Computed_GO_Process_IDs:
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Computed_GO_Processes:
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Curated_GO_Component_IDs: GO:1990225
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Curated_GO_Function_IDs:
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Curated_GO_Functions:
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No Results
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Fasta :-
>PBANKA_0932000
MSGLRLFYVCIFIVLSTFIHTAKSIQDNDDIWGFSFFNKDEKVEEGSNQNVQHADDAANT
GHEQQNAVNISEHHPNNTEELKSHKEHDEGQSEQVSQQINNENERSNNNNNNNGNTPEHN
PSNQTNNSDIQESNHNDANHQNITTEHAQTENVNNTEHIQTENVNNTEHAQTENVNNTEH
IQTENVNNTEHAQTENGHSGGDEGEHSAEGDQSNINNNNKDHSDIYAHNSSSSDISQFSD
TTSSSSSSSGYSNLRKPAFVNVSVPAFGNASAPAFGNTYRAHKGSSNTEFSFKDSLQSPS
NILLYDYGHNLENYINGNHSDIMDKGMNSITDPYNYNLLKKKYIYLSLAERAIFEIMDVS
KKGLSEINSMRNSETISKIYYDALKRLKINEHSLDSRLELISLETCDKILSEMFKILTEL
SYDNYSQFYESMNINKSALSESFKDIKIKILKKIGVSYAKFPPIIKETNGSQCPVNNLII
SITPRELSQRLAIMFSSWLSTDEYGSINDFENNIELNVLCSGASILMQQWKYYQNALGFE
DNNDHAFLGLIDELLTIDKRYSKNEEHSKSLEQMKKSKVFNYCTKLMRTSGNISTIPFNH
ENNKTPSSSIIGSLGNLVKAHISGYYAATAQRINSYFNYSNNKDQKKALYKVISVCTLLN
LTDILFNCTDPQSTNSANLNILKLNVLNTKGKEILYRLYNLSYLLESENEAIKEVCNPKN
ASVDKSLQKLLELLSSNSHNVLAHEMEKRALDTDYINEEINNISDFDHNEKDNGEDDVEK
AIFDDL
- Download Fasta
-
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0932000.fa
Sequence name : PBANKA_0932000
Sequence length : 786
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.697
CoefTot : 0.064
ChDiff : -42
ZoneTo : 26
KR : 2
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 2.006 2.147 0.361 0.746
MesoH : -0.637 0.141 -0.408 0.179
MuHd_075 : 15.909 11.972 2.998 3.490
MuHd_095 : 24.543 19.742 7.802 6.546
MuHd_100 : 20.526 15.222 6.958 5.175
MuHd_105 : 20.306 17.388 6.467 5.983
Hmax_075 : 16.800 19.017 3.067 7.560
Hmax_095 : 20.600 24.400 5.436 7.857
Hmax_100 : 19.900 20.900 5.080 7.580
Hmax_105 : 21.100 24.700 4.657 6.410
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.7927 0.2073
DFMC : 0.8514 0.1486
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##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
786 PBANKA_0932000
MSGLRLFYVCIFIVLSTFIHTAKSIQDNDDIWGFSFFNKDEKVEEGSNQNVQHADDAANTGHEQQNAVNISEHHPNNTEE 80
LKSHKEHDEGQSEQVSQQINNENERSNNNNNNNGNTPEHNPSNQTNNSDIQESNHNDANHQNITTEHAQTENVNNTEHIQ 160
TENVNNTEHAQTENVNNTEHIQTENVNNTEHAQTENGHSGGDEGEHSAEGDQSNINNNNKDHSDIYAHNSSSSDISQFSD 240
TTSSSSSSSGYSNLRKPAFVNVSVPAFGNASAPAFGNTYRAHKGSSNTEFSFKDSLQSPSNILLYDYGHNLENYINGNHS 320
DIMDKGMNSITDPYNYNLLKKKYIYLSLAERAIFEIMDVSKKGLSEINSMRNSETISKIYYDALKRLKINEHSLDSRLEL 400
ISLETCDKILSEMFKILTELSYDNYSQFYESMNINKSALSESFKDIKIKILKKIGVSYAKFPPIIKETNGSQCPVNNLII 480
SITPRELSQRLAIMFSSWLSTDEYGSINDFENNIELNVLCSGASILMQQWKYYQNALGFEDNNDHAFLGLIDELLTIDKR 560
YSKNEEHSKSLEQMKKSKVFNYCTKLMRTSGNISTIPFNHENNKTPSSSIIGSLGNLVKAHISGYYAATAQRINSYFNYS 640
NNKDQKKALYKVISVCTLLNLTDILFNCTDPQSTNSANLNILKLNVLNTKGKEILYRLYNLSYLLESENEAIKEVCNPKN 720
ASVDKSLQKLLELLSSNSHNVLAHEMEKRALDTDYINEEINNISDFDHNEKDNGEDDVEKAIFDDL 800
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................................................ 560
................................................................................ 640
................................................................................ 720
.................................................................. 800
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PBANKA_0932000 5 --MSGLR|LF 0.072 .
PBANKA_0932000 23 TFIHTAK|SI 0.104 .
PBANKA_0932000 39 GFSFFNK|DE 0.094 .
PBANKA_0932000 42 FFNKDEK|VE 0.062 .
PBANKA_0932000 82 NNTEELK|SH 0.070 .
PBANKA_0932000 85 EELKSHK|EH 0.067 .
PBANKA_0932000 105 INNENER|SN 0.123 .
PBANKA_0932000 220 NINNNNK|DH 0.088 .
PBANKA_0932000 255 SGYSNLR|KP 0.075 .
PBANKA_0932000 256 GYSNLRK|PA 0.106 .
PBANKA_0932000 280 AFGNTYR|AH 0.093 .
PBANKA_0932000 283 NTYRAHK|GS 0.190 .
PBANKA_0932000 293 NTEFSFK|DS 0.074 .
PBANKA_0932000 325 HSDIMDK|GM 0.063 .
PBANKA_0932000 340 YNYNLLK|KK 0.062 .
PBANKA_0932000 341 NYNLLKK|KY 0.081 .
PBANKA_0932000 342 YNLLKKK|YI 0.114 .
PBANKA_0932000 351 YLSLAER|AI 0.118 .
PBANKA_0932000 361 EIMDVSK|KG 0.063 .
PBANKA_0932000 362 IMDVSKK|GL 0.130 .
PBANKA_0932000 371 SEINSMR|NS 0.101 .
PBANKA_0932000 378 NSETISK|IY 0.066 .
PBANKA_0932000 385 IYYDALK|RL 0.063 .
PBANKA_0932000 386 YYDALKR|LK 0.090 .
PBANKA_0932000 388 DALKRLK|IN 0.066 .
PBANKA_0932000 397 EHSLDSR|LE 0.084 .
PBANKA_0932000 408 SLETCDK|IL 0.068 .
PBANKA_0932000 415 ILSEMFK|IL 0.068 .
PBANKA_0932000 436 ESMNINK|SA 0.075 .
PBANKA_0932000 444 ALSESFK|DI 0.094 .
PBANKA_0932000 447 ESFKDIK|IK 0.059 .
PBANKA_0932000 449 FKDIKIK|IL 0.081 .
PBANKA_0932000 452 IKIKILK|KI 0.071 .
PBANKA_0932000 453 KIKILKK|IG 0.072 .
PBANKA_0932000 460 IGVSYAK|FP 0.065 .
PBANKA_0932000 466 KFPPIIK|ET 0.057 .
PBANKA_0932000 485 IISITPR|EL 0.149 .
PBANKA_0932000 490 PRELSQR|LA 0.093 .
PBANKA_0932000 531 ILMQQWK|YY 0.086 .
PBANKA_0932000 559 ELLTIDK|RY 0.062 .
PBANKA_0932000 560 LLTIDKR|YS 0.181 .
PBANKA_0932000 563 IDKRYSK|NE 0.107 .
PBANKA_0932000 569 KNEEHSK|SL 0.105 .
PBANKA_0932000 575 KSLEQMK|KS 0.061 .
PBANKA_0932000 576 SLEQMKK|SK 0.129 .
PBANKA_0932000 578 EQMKKSK|VF 0.066 .
PBANKA_0932000 585 VFNYCTK|LM 0.068 .
PBANKA_0932000 588 YCTKLMR|TS 0.088 .
PBANKA_0932000 604 FNHENNK|TP 0.067 .
PBANKA_0932000 619 SLGNLVK|AH 0.065 .
PBANKA_0932000 632 YAATAQR|IN 0.082 .
PBANKA_0932000 643 FNYSNNK|DQ 0.068 .
PBANKA_0932000 646 SNNKDQK|KA 0.078 .
PBANKA_0932000 647 NNKDQKK|AL 0.140 .
PBANKA_0932000 651 QKKALYK|VI 0.067 .
PBANKA_0932000 683 ANLNILK|LN 0.054 .
PBANKA_0932000 690 LNVLNTK|GK 0.064 .
PBANKA_0932000 692 VLNTKGK|EI 0.068 .
PBANKA_0932000 697 GKEILYR|LY 0.085 .
PBANKA_0932000 713 SENEAIK|EV 0.070 .
PBANKA_0932000 719 KEVCNPK|NA 0.069 .
PBANKA_0932000 725 KNASVDK|SL 0.108 .
PBANKA_0932000 729 VDKSLQK|LL 0.058 .
PBANKA_0932000 748 LAHEMEK|RA 0.059 .
PBANKA_0932000 749 AHEMEKR|AL 0.191 .
PBANKA_0932000 771 DFDHNEK|DN 0.067 .
PBANKA_0932000 780 GEDDVEK|AI 0.071 .
____________________________^_________________
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Fasta :-
>PBANKA_0932000
ATGTCTGGCCTAAGGTTATTTTATGTATGCATTTTCATAGTGCTCTCTACATTTATTCAT
ACCGCAAAATCAATCCAAGATAATGATGATATTTGGGGATTTTCCTTTTTTAACAAAGAT
GAAAAAGTAGAAGAGGGTTCTAATCAAAATGTGCAGCACGCTGATGATGCTGCCAATACA
GGGCATGAACAACAAAACGCAGTAAATATTTCTGAACACCATCCAAATAATACTGAAGAA
TTAAAAAGCCATAAAGAACATGATGAAGGTCAATCTGAACAGGTTTCTCAACAAATAAAT
AACGAAAACGAGCGTAGCAATAATAATAATAACAATAATGGCAATACTCCAGAACATAAT
CCTTCGAACCAAACCAATAATTCAGACATCCAAGAATCAAATCATAATGATGCGAACCAT
CAAAATATCACAACTGAACATGCACAAACTGAAAATGTAAACAACACTGAACATATACAA
ACTGAAAATGTAAACAATACTGAGCATGCACAAACTGAAAATGTAAACAATACTGAACAT
ATACAAACTGAAAATGTAAACAATACTGAACATGCACAAACTGAAAATGGACATAGTGGT
GGAGATGAGGGTGAACACAGTGCAGAAGGGGACCAAAGCAACATAAACAATAATAATAAA
GATCATAGTGATATATATGCACACAACAGTTCTAGTTCAGACATCAGTCAATTTAGTGAT
ACGACAAGTTCAAGCTCATCTAGTTCAGGATATTCGAATTTAAGAAAACCTGCTTTTGTA
AATGTTTCTGTACCCGCTTTTGGAAATGCTTCTGCACCCGCTTTTGGAAATACTTATAGA
GCTCATAAAGGATCTTCTAATACAGAATTTTCATTTAAAGACTCGTTACAAAGTCCCTCA
AATATTTTATTATATGATTATGGGCACAATCTTGAAAATTATATTAATGGAAATCATAGT
GATATTATGGATAAAGGAATGAATAGCATTACCGATCCTTATAATTATAATTTATTAAAA
AAGAAATATATATATTTATCATTAGCAGAAAGAGCAATATTCGAAATTATGGATGTTTCT
AAAAAAGGATTGAGTGAAATTAATAGTATGCGAAATAGTGAAACTATTTCTAAAATATAT
TATGATGCTTTAAAAAGATTAAAAATAAATGAACATTCTCTTGATTCAAGATTAGAGTTG
ATTTCACTTGAAACATGTGATAAAATATTATCAGAAATGTTTAAAATATTAACTGAATTG
TCTTATGATAATTATTCACAATTTTATGAATCTATGAATATTAATAAATCAGCATTAAGT
GAATCGTTTAAAGACATCAAAATCAAAATATTAAAAAAAATAGGTGTTTCATATGCAAAA
TTTCCACCAATTATTAAAGAGACAAACGGAAGTCAATGTCCAGTTAATAATTTGATTATA
AGTATAACACCAAGAGAATTATCACAACGTCTTGCTATTATGTTTAGCAGTTGGCTATCT
ACTGATGAATACGGTTCTATAAATGATTTTGAAAATAATATCGAACTAAATGTTTTATGT
TCAGGTGCATCCATATTAATGCAACAATGGAAATATTATCAAAATGCTTTAGGGTTTGAA
GATAATAATGATCATGCATTTTTAGGTTTAATCGATGAATTATTAACAATAGACAAAAGA
TATAGTAAAAATGAAGAACATAGTAAATCTTTAGAACAAATGAAAAAATCAAAAGTATTT
AATTATTGTACTAAACTTATGAGAACAAGTGGAAACATTTCAACAATACCATTTAATCAT
GAAAACAATAAAACTCCAAGTTCATCCATTATTGGTTCATTAGGAAATTTAGTTAAGGCA
CATATAAGTGGATATTATGCAGCTACTGCTCAAAGAATTAACTCTTATTTTAATTATTCT
AACAATAAAGATCAAAAGAAAGCACTATACAAAGTCATATCAGTTTGTACTCTCTTAAAT
TTAACAGATATTTTATTTAATTGCACAGATCCACAATCAACTAATTCAGCAAATTTGAAC
ATTTTGAAGCTAAATGTATTAAATACTAAAGGAAAAGAAATTCTATATCGCCTTTATAAT
TTAAGCTACTTATTAGAGAGCGAAAACGAAGCAATTAAAGAAGTGTGTAATCCTAAAAAT
GCCTCAGTTGATAAATCGTTACAAAAATTGTTAGAATTACTTTCATCAAACTCACACAAC
GTATTAGCACATGAAATGGAAAAGAGAGCTCTTGATACTGATTATATTAACGAGGAAATA
AACAATATAAGTGATTTTGATCATAATGAAAAAGACAATGGAGAAGATGATGTTGAGAAA
GCCATTTTTGATGATTTATGA
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| ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method |
| PBANKA_0932000 | 199 S | ENGHSGGDE | 0.996 | unsp | PBANKA_0932000 | 199 S | ENGHSGGDE | 0.996 | unsp | PBANKA_0932000 | 199 S | ENGHSGGDE | 0.996 | unsp | PBANKA_0932000 | 246 S | TSSSSSSSG | 0.992 | unsp | PBANKA_0932000 | 247 S | SSSSSSSGY | 0.991 | unsp | PBANKA_0932000 | 291 S | NTEFSFKDS | 0.997 | unsp | PBANKA_0932000 | 442 S | ALSESFKDI | 0.997 | unsp | PBANKA_0932000 | 506 S | DEYGSINDF | 0.991 | unsp | PBANKA_0932000 | 562 S | DKRYSKNEE | 0.997 | unsp | PBANKA_0932000 | 24 S | HTAKSIQDN | 0.996 | unsp | PBANKA_0932000 | 83 S | EELKSHKEH | 0.998 | unsp |