PBANKA_0932400 | berghepain-2

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0932400OTHER0.9998050.0000590.000135
No Results

  • Fasta :-

    >PBANKA_0932400 MNYHSSHHIRPEEEIFVDKGIQNVQLRRKNKMLIVTLAIVLGMFGFTVIYFNRTNKSSFN NGNVENYSNDDYLINYLLKSKAVKKFMGSKIEELIVESEQNEKNSIIVKDNKNNDYNEKS VLFNKNNDSKSFTTNLHDMQSIMNNLESVNIFYNFMKEYNKQYNSAEEIQERFYIFSENL KKIEKHNKENHLYTKGINAFSDMRHEEFKMKYLNNKLKENHSIDLRHLIPYTTAISKYKS PTDKVNYTSFDWRDYNVIIGVKDQQKCASCWAFATAGVVAAQYAIRKNQKVSLSEQQLVD CAQNNFGCEGGILPYAFEDLIDMDGLCEDKYYPYVSNVPELCEINKCTEKYSISKFALVP FNNYKEAIQYLGPITIAVGVDDDFESYNGGIFDGECTDFANHAVMLIGYGVEEVYDKRLK KNVKEYYYIIRNSWGEDWGERGYIRLKTNESGTLRNCVLVQGYAPIIE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0932400.fa Sequence name : PBANKA_0932400 Sequence length : 468 VALUES OF COMPUTED PARAMETERS Coef20 : 2.782 CoefTot : -0.902 ChDiff : -6 ZoneTo : 11 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.506 2.624 0.492 0.901 MesoH : -0.857 0.141 -0.410 0.229 MuHd_075 : 24.020 12.222 7.457 2.137 MuHd_095 : 27.430 14.778 5.179 5.116 MuHd_100 : 24.268 13.867 5.751 4.426 MuHd_105 : 16.529 10.917 5.627 3.281 Hmax_075 : -5.163 2.450 -2.720 0.840 Hmax_095 : 0.875 4.200 -2.111 2.152 Hmax_100 : 2.700 6.200 -2.245 3.320 Hmax_105 : -2.917 4.667 -2.543 2.683 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9960 0.0040 DFMC : 0.9934 0.0066
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 468 PBANKA_0932400 MNYHSSHHIRPEEEIFVDKGIQNVQLRRKNKMLIVTLAIVLGMFGFTVIYFNRTNKSSFNNGNVENYSNDDYLINYLLKS 80 KAVKKFMGSKIEELIVESEQNEKNSIIVKDNKNNDYNEKSVLFNKNNDSKSFTTNLHDMQSIMNNLESVNIFYNFMKEYN 160 KQYNSAEEIQERFYIFSENLKKIEKHNKENHLYTKGINAFSDMRHEEFKMKYLNNKLKENHSIDLRHLIPYTTAISKYKS 240 PTDKVNYTSFDWRDYNVIIGVKDQQKCASCWAFATAGVVAAQYAIRKNQKVSLSEQQLVDCAQNNFGCEGGILPYAFEDL 320 IDMDGLCEDKYYPYVSNVPELCEINKCTEKYSISKFALVPFNNYKEAIQYLGPITIAVGVDDDFESYNGGIFDGECTDFA 400 NHAVMLIGYGVEEVYDKRLKKNVKEYYYIIRNSWGEDWGERGYIRLKTNESGTLRNCVLVQGYAPIIE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0932400 10 HSSHHIR|PE 0.203 . PBANKA_0932400 19 EEIFVDK|GI 0.069 . PBANKA_0932400 27 IQNVQLR|RK 0.101 . PBANKA_0932400 28 QNVQLRR|KN 0.109 . PBANKA_0932400 29 NVQLRRK|NK 0.072 . PBANKA_0932400 31 QLRRKNK|ML 0.214 . PBANKA_0932400 53 TVIYFNR|TN 0.092 . PBANKA_0932400 56 YFNRTNK|SS 0.236 . PBANKA_0932400 79 LINYLLK|SK 0.081 . PBANKA_0932400 81 NYLLKSK|AV 0.068 . PBANKA_0932400 84 LKSKAVK|KF 0.073 . PBANKA_0932400 85 KSKAVKK|FM 0.163 . PBANKA_0932400 90 KKFMGSK|IE 0.065 . PBANKA_0932400 103 ESEQNEK|NS 0.059 . PBANKA_0932400 109 KNSIIVK|DN 0.074 . PBANKA_0932400 112 IIVKDNK|NN 0.069 . PBANKA_0932400 119 NNDYNEK|SV 0.083 . PBANKA_0932400 125 KSVLFNK|NN 0.065 . PBANKA_0932400 130 NKNNDSK|SF 0.108 . PBANKA_0932400 157 IFYNFMK|EY 0.072 . PBANKA_0932400 161 FMKEYNK|QY 0.063 . PBANKA_0932400 172 AEEIQER|FY 0.106 . PBANKA_0932400 181 IFSENLK|KI 0.068 . PBANKA_0932400 182 FSENLKK|IE 0.080 . PBANKA_0932400 185 NLKKIEK|HN 0.057 . PBANKA_0932400 188 KIEKHNK|EN 0.070 . PBANKA_0932400 195 ENHLYTK|GI 0.075 . PBANKA_0932400 204 NAFSDMR|HE 0.077 . PBANKA_0932400 209 MRHEEFK|MK 0.073 . PBANKA_0932400 211 HEEFKMK|YL 0.084 . PBANKA_0932400 216 MKYLNNK|LK 0.063 . PBANKA_0932400 218 YLNNKLK|EN 0.072 . PBANKA_0932400 226 NHSIDLR|HL 0.102 . PBANKA_0932400 237 YTTAISK|YK 0.061 . PBANKA_0932400 239 TAISKYK|SP 0.101 . PBANKA_0932400 244 YKSPTDK|VN 0.079 . PBANKA_0932400 253 YTSFDWR|DY 0.152 . PBANKA_0932400 262 NVIIGVK|DQ 0.059 . PBANKA_0932400 266 GVKDQQK|CA 0.071 . PBANKA_0932400 286 AAQYAIR|KN 0.086 . PBANKA_0932400 287 AQYAIRK|NQ 0.074 . PBANKA_0932400 290 AIRKNQK|VS 0.060 . PBANKA_0932400 330 DGLCEDK|YY 0.056 . PBANKA_0932400 346 ELCEINK|CT 0.064 . PBANKA_0932400 350 INKCTEK|YS 0.065 . PBANKA_0932400 355 EKYSISK|FA 0.066 . PBANKA_0932400 365 VPFNNYK|EA 0.080 . PBANKA_0932400 417 VEEVYDK|RL 0.059 . PBANKA_0932400 418 EEVYDKR|LK 0.103 . PBANKA_0932400 420 VYDKRLK|KN 0.055 . PBANKA_0932400 421 YDKRLKK|NV 0.430 . PBANKA_0932400 424 RLKKNVK|EY 0.070 . PBANKA_0932400 431 EYYYIIR|NS 0.085 . PBANKA_0932400 441 GEDWGER|GY 0.079 . PBANKA_0932400 445 GERGYIR|LK 0.085 . PBANKA_0932400 447 RGYIRLK|TN 0.060 . PBANKA_0932400 455 NESGTLR|NC 0.080 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0932400 ATGAATTACCATTCTAGCCATCATATTAGACCCGAGGAGGAAATATTTGTTGATAAGGGT ATACAAAATGTACAGTTACGAAGAAAAAATAAAATGCTTATAGTTACCCTGGCTATAGTT TTAGGTATGTTTGGTTTTACCGTCATATATTTTAATAGAACAAATAAATCATCATTTAAT AATGGAAATGTTGAAAATTATTCGAATGATGACTATTTAATAAATTACTTATTAAAAAGC AAAGCAGTAAAGAAATTTATGGGATCTAAAATTGAAGAACTTATAGTAGAAAGTGAACAA AATGAAAAGAATAGCATTATCGTTAAAGATAATAAAAATAATGACTATAACGAAAAATCT GTATTATTTAATAAAAATAACGACAGCAAATCATTCACAACAAATTTACATGATATGCAA TCTATTATGAACAATTTAGAATCTGTGAACATTTTTTACAATTTCATGAAAGAATATAAC AAACAATATAATTCAGCTGAAGAAATACAAGAGAGATTTTATATCTTTTCTGAAAATTTA AAAAAAATTGAAAAGCATAATAAAGAAAATCATTTGTATACAAAAGGTATTAATGCATTT AGTGATATGCGTCATGAAGAATTTAAAATGAAATATTTAAATAATAAACTAAAAGAAAAC CACAGCATTGATCTCCGACATTTAATTCCTTATACTACTGCAATTAGTAAGTACAAGTCT CCAACCGATAAAGTTAACTATACAAGTTTTGATTGGAGAGATTATAATGTTATTATAGGC GTTAAAGATCAACAAAAGTGTGCTTCATGCTGGGCATTTGCTACCGCTGGTGTTGTCGCA GCCCAATATGCTATTAGAAAAAATCAAAAGGTTTCTTTAAGTGAACAACAATTAGTTGAT TGTGCACAAAATAATTTTGGATGTGAAGGAGGTATACTTCCATATGCTTTTGAAGATCTT ATAGACATGGATGGTTTATGTGAAGATAAATATTATCCATATGTAAGTAATGTTCCAGAA TTATGCGAAATTAACAAGTGTACCGAAAAATACTCAATTTCAAAATTTGCATTAGTACCA TTCAATAATTATAAAGAAGCTATTCAATATTTAGGTCCAATCACAATAGCTGTAGGTGTA GATGATGATTTTGAATCTTACAATGGTGGTATATTCGATGGAGAATGTACAGATTTTGCA AATCATGCAGTTATGCTTATTGGATATGGTGTTGAAGAGGTATATGATAAGCGTCTTAAA AAAAATGTTAAAGAATATTATTATATAATTAGAAACTCTTGGGGTGAAGACTGGGGAGAA CGTGGTTACATAAGACTTAAGACTAACGAATCAGGAACACTCAGAAATTGTGTGTTAGTA CAAGGTTATGCTCCTATAATTGAATAA
  • Download Fasta

  • Fasta :-

    MNYHSSHHIRPEEEIFVDKGIQNVQLRRKNKMLIVTLAIVLGMFGFTVIYFNRTNKSSFN NGNVENYSNDDYLINYLLKSKAVKKFMGSKIEELIVESEQNEKNSIIVKDNKNNDYNEKS VLFNKNNDSKSFTTNLHDMQSIMNNLESVNIFYNFMKEYNKQYNSAEEIQERFYIFSENL KKIEKHNKENHLYTKGINAFSDMRHEEFKMKYLNNKLKENHSIDLRHLIPYTTAISKYKS PTDKVNYTSFDWRDYNVIIGVKDQQKCASCWAFATAGVVAAQYAIRKNQKVSLSEQQLVD CAQNNFGCEGGILPYAFEDLIDMDGLCEDKYYPYVSNVPELCEINKCTEKYSISKFALVP FNNYKEAIQYLGPITIAVGVDDDFESYNGGIFDGECTDFANHAVMLIGYGVEEVYDKRLK KNVKEYYYIIRNSWGEDWGERGYIRLKTNESGTLRNCVLVQGYAPIIE

  • title: active site
  • coordinates: Q264,C270,H402,N432
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_093240072 YSNDDYLINY0.991unspPBANKA_0932400240 SSKYKSPTDK0.998unsp

PBANKA_093240      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India