PBANKA_1019300 | enoyl-CoA hydratase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      

  • Computed_GO_Functions:  catalytic activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1019300OTHER0.8277770.0001470.172076
No Results

  • Fasta :-

    >PBANKA_1019300 MQIQKMFFRARCGKRLYSDINIRRNLKLFNTFKQYTTYLNKQEIINNSSQLIDEKKKNDN INFCNKYVDFFRDESRNIGILTFKNICDKKNIFPDFLEELKNVIDHINNIISNEENNKFY INEFKNKDNYLVKNLKKAIPYYDNKLKVLIINGSDSNFRKNSNTFLNSIDFNSYLKCDEG ANADISSMFRIICNNIQQLPLITISNINGICYNSGMDIILSTDFRISNENSKYGYDKTYI GLYPYGGSIQKLFRHIPMNYSKYLLLTSQTINAFDALKFNLIDICMNQNDEFYINNSNVN FDDNLTKKNKIDIIKENIIKYFNDIFINEYFKLKANDDSFIFTLFFAFQFLFTPTYILQN IKLSINEGMLLSDSNAYLDCDRMVFEKSINTPERLEILNYLKTKKTSEYKPKGN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1019300.fa Sequence name : PBANKA_1019300 Sequence length : 414 VALUES OF COMPUTED PARAMETERS Coef20 : 4.394 CoefTot : -1.264 ChDiff : 8 ZoneTo : 42 KR : 10 DE : 1 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.124 1.571 0.183 0.718 MesoH : -0.677 0.318 -0.375 0.241 MuHd_075 : 51.130 25.039 14.214 10.662 MuHd_095 : 33.818 16.086 7.806 6.801 MuHd_100 : 34.808 22.836 8.835 8.426 MuHd_105 : 40.570 27.551 11.193 10.664 Hmax_075 : 0.962 17.617 4.513 1.881 Hmax_095 : 0.800 5.500 -0.867 2.320 Hmax_100 : 12.500 13.500 1.000 5.170 Hmax_105 : 10.600 12.900 0.034 5.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0957 0.9043 DFMC : 0.0314 0.9686 This protein is probably imported in mitochondria. f(Ser) = 0.0238 f(Arg) = 0.1190 CMi = 0.10060 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 414 PBANKA_1019300 MQIQKMFFRARCGKRLYSDINIRRNLKLFNTFKQYTTYLNKQEIINNSSQLIDEKKKNDNINFCNKYVDFFRDESRNIGI 80 LTFKNICDKKNIFPDFLEELKNVIDHINNIISNEENNKFYINEFKNKDNYLVKNLKKAIPYYDNKLKVLIINGSDSNFRK 160 NSNTFLNSIDFNSYLKCDEGANADISSMFRIICNNIQQLPLITISNINGICYNSGMDIILSTDFRISNENSKYGYDKTYI 240 GLYPYGGSIQKLFRHIPMNYSKYLLLTSQTINAFDALKFNLIDICMNQNDEFYINNSNVNFDDNLTKKNKIDIIKENIIK 320 YFNDIFINEYFKLKANDDSFIFTLFFAFQFLFTPTYILQNIKLSINEGMLLSDSNAYLDCDRMVFEKSINTPERLEILNY 400 LKTKKTSEYKPKGN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .............. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1019300 5 --MQIQK|MF 0.067 . PBANKA_1019300 9 IQKMFFR|AR 0.100 . PBANKA_1019300 11 KMFFRAR|CG 0.085 . PBANKA_1019300 14 FRARCGK|RL 0.125 . PBANKA_1019300 15 RARCGKR|LY 0.204 . PBANKA_1019300 23 YSDINIR|RN 0.079 . PBANKA_1019300 24 SDINIRR|NL 0.101 . PBANKA_1019300 27 NIRRNLK|LF 0.092 . PBANKA_1019300 33 KLFNTFK|QY 0.070 . PBANKA_1019300 41 YTTYLNK|QE 0.056 . PBANKA_1019300 55 SQLIDEK|KK 0.060 . PBANKA_1019300 56 QLIDEKK|KN 0.104 . PBANKA_1019300 57 LIDEKKK|ND 0.088 . PBANKA_1019300 66 NINFCNK|YV 0.090 . PBANKA_1019300 72 KYVDFFR|DE 0.109 . PBANKA_1019300 76 FFRDESR|NI 0.096 . PBANKA_1019300 84 IGILTFK|NI 0.068 . PBANKA_1019300 89 FKNICDK|KN 0.058 . PBANKA_1019300 90 KNICDKK|NI 0.108 . PBANKA_1019300 101 DFLEELK|NV 0.066 . PBANKA_1019300 118 SNEENNK|FY 0.069 . PBANKA_1019300 125 FYINEFK|NK 0.062 . PBANKA_1019300 127 INEFKNK|DN 0.077 . PBANKA_1019300 133 KDNYLVK|NL 0.075 . PBANKA_1019300 136 YLVKNLK|KA 0.065 . PBANKA_1019300 137 LVKNLKK|AI 0.092 . PBANKA_1019300 145 IPYYDNK|LK 0.061 . PBANKA_1019300 147 YYDNKLK|VL 0.062 . PBANKA_1019300 159 GSDSNFR|KN 0.084 . PBANKA_1019300 160 SDSNFRK|NS 0.125 . PBANKA_1019300 176 DFNSYLK|CD 0.061 . PBANKA_1019300 190 DISSMFR|II 0.108 . PBANKA_1019300 225 ILSTDFR|IS 0.092 . PBANKA_1019300 232 ISNENSK|YG 0.070 . PBANKA_1019300 237 SKYGYDK|TY 0.067 . PBANKA_1019300 251 YGGSIQK|LF 0.059 . PBANKA_1019300 254 SIQKLFR|HI 0.095 . PBANKA_1019300 262 IPMNYSK|YL 0.064 . PBANKA_1019300 278 NAFDALK|FN 0.060 . PBANKA_1019300 307 FDDNLTK|KN 0.057 . PBANKA_1019300 308 DDNLTKK|NK 0.113 . PBANKA_1019300 310 NLTKKNK|ID 0.070 . PBANKA_1019300 315 NKIDIIK|EN 0.063 . PBANKA_1019300 320 IKENIIK|YF 0.072 . PBANKA_1019300 332 FINEYFK|LK 0.056 . PBANKA_1019300 334 NEYFKLK|AN 0.071 . PBANKA_1019300 362 YILQNIK|LS 0.057 . PBANKA_1019300 382 AYLDCDR|MV 0.086 . PBANKA_1019300 387 DRMVFEK|SI 0.113 . PBANKA_1019300 394 SINTPER|LE 0.079 . PBANKA_1019300 402 EILNYLK|TK 0.054 . PBANKA_1019300 404 LNYLKTK|KT 0.079 . PBANKA_1019300 405 NYLKTKK|TS 0.089 . PBANKA_1019300 410 KKTSEYK|PK 0.068 . PBANKA_1019300 412 TSEYKPK|GN 0.092 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1019300 ATGCAAATACAAAAAATGTTTTTTCGGGCACGATGTGGGAAACGACTTTATTCGGATATA AATATAAGAAGGAACTTGAAACTATTCAATACATTTAAACAGTATACAACTTATTTGAAC AAACAAGAAATCATAAATAATAGTTCTCAATTAATTGATGAGAAAAAAAAAAATGATAAT ATAAATTTTTGTAATAAATATGTTGACTTTTTTCGAGATGAAAGTAGAAATATTGGAATA CTAACTTTTAAAAATATATGTGATAAGAAAAACATTTTTCCTGATTTTTTAGAAGAATTG AAAAATGTCATAGACCATATAAATAATATCATATCTAACGAGGAAAATAATAAATTCTAT ATCAATGAATTTAAAAACAAAGATAATTATTTAGTCAAAAATTTGAAAAAAGCAATACCA TATTATGACAATAAATTAAAGGTATTAATCATTAATGGGAGTGATAGCAACTTTAGAAAA AATAGTAATACATTCTTAAATTCAATTGATTTTAACTCCTATTTAAAATGTGATGAAGGA GCTAATGCTGATATTTCAAGCATGTTTAGAATAATATGCAATAATATTCAACAACTACCT TTAATAACCATTAGTAATATTAATGGTATTTGCTATAACAGTGGTATGGACATAATTTTG TCAACAGATTTTAGAATCTCAAATGAAAATAGCAAATATGGATATGATAAAACTTATATT GGTTTATACCCATATGGCGGTAGCATACAAAAACTATTTAGACATATTCCTATGAATTAT TCAAAATATTTATTATTAACAAGTCAAACAATCAATGCATTTGATGCATTAAAATTCAAT TTAATAGATATATGTATGAATCAAAATGATGAATTTTATATAAATAATTCTAACGTTAAT TTTGATGACAATTTAACTAAAAAAAATAAAATCGATATTATAAAAGAAAATATTATAAAA TATTTCAATGATATTTTCATAAATGAATATTTTAAATTAAAGGCAAATGATGATAGCTTT ATTTTTACTCTTTTTTTTGCTTTTCAATTTTTATTTACTCCTACTTATATTCTACAAAAC ATAAAACTCTCTATTAATGAAGGGATGCTACTAAGTGATTCAAATGCATATTTAGATTGT GATCGAATGGTATTCGAAAAATCTATAAACACACCTGAACGATTAGAAATTCTTAATTAT TTAAAAACAAAAAAAACAAGCGAATACAAGCCGAAGGGAAATTAG
  • Download Fasta

  • Fasta :-

    MQIQKMFFRARCGKRLYSDINIRRNLKLFNTFKQYTTYLNKQEIINNSSQLIDEKKKNDN INFCNKYVDFFRDESRNIGILTFKNICDKKNIFPDFLEELKNVIDHINNIISNEENNKFY INEFKNKDNYLVKNLKKAIPYYDNKLKVLIINGSDSNFRKNSNTFLNSIDFNSYLKCDEG ANADISSMFRIICNNIQQLPLITISNINGICYNSGMDIILSTDFRISNENSKYGYDKTYI GLYPYGGSIQKLFRHIPMNYSKYLLLTSQTINAFDALKFNLIDICMNQNDEFYINNSNVN FDDNLTKKNKIDIIKENIIKYFNDIFINEYFKLKANDDSFIFTLFFAFQFLFTPTYILQN IKLSINEGMLLSDSNAYLDCDRMVFEKSINTPERLEILNYLKTKKTSEYKPKGN

  • title: trimer interface
  • coordinates: N194,I202,D223,F224,R225,I226,T238,Y239,I240,G241,G247,I249,Q250,K251,F253,R254,N259,Y260,K262,Y263,L265,L266,Q269,N280,D283
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1019300227 SDFRISNENS0.997unspPBANKA_1019300407 STKKTSEYKP0.994unsp

PBANKA_101930      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India