PBANKA_1032400 | alpha/beta hydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1032400OTHER0.9668540.0014000.031746
No Results

  • Fasta :-

    >PBANKA_1032400 MLSSNRILHEYVICSKGITYAVYSNNLVQKDKTPNNETALNVNNNQANNQKAIILLLHGL NGGTHQLENMFKTLINNGYQFISIDFYGHGNSSLFGNPSKYTEKLYTEQIYDVLKIKGLL NEKFTVIAFSMGCIIATHLSKDNKISIGKYCLISAAGMAKPRYRFLVFLLKYNIRLCLKL AKRYSRSVISEDTVKKEYYNFENNLDEATKRYEILKQNHEKFMETFLKVLIGIKLQNSKK HYFSLFKTNADILFIYGKNDTLTPYIYTQKFLEQKKEYSKNVKMIIIPECCHLVIHEKFH ELDHHLIYFLK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1032400.fa Sequence name : PBANKA_1032400 Sequence length : 311 VALUES OF COMPUTED PARAMETERS Coef20 : 4.060 CoefTot : -0.886 ChDiff : 15 ZoneTo : 30 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.900 1.676 0.303 0.623 MesoH : -0.588 0.545 -0.357 0.211 MuHd_075 : 38.209 32.715 13.104 9.570 MuHd_095 : 22.016 15.197 7.836 3.784 MuHd_100 : 30.325 21.505 10.469 6.298 MuHd_105 : 33.387 21.975 10.874 6.773 Hmax_075 : 18.300 25.300 3.570 7.980 Hmax_095 : 9.888 14.200 3.881 5.030 Hmax_100 : 13.500 17.400 4.587 5.370 Hmax_105 : 15.050 18.433 4.961 5.915 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7716 0.2284 DFMC : 0.7011 0.2989
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 311 PBANKA_1032400 MLSSNRILHEYVICSKGITYAVYSNNLVQKDKTPNNETALNVNNNQANNQKAIILLLHGLNGGTHQLENMFKTLINNGYQ 80 FISIDFYGHGNSSLFGNPSKYTEKLYTEQIYDVLKIKGLLNEKFTVIAFSMGCIIATHLSKDNKISIGKYCLISAAGMAK 160 PRYRFLVFLLKYNIRLCLKLAKRYSRSVISEDTVKKEYYNFENNLDEATKRYEILKQNHEKFMETFLKVLIGIKLQNSKK 240 HYFSLFKTNADILFIYGKNDTLTPYIYTQKFLEQKKEYSKNVKMIIIPECCHLVIHEKFHELDHHLIYFLK 320 ................................................................................ 80 ................................................................................ 160 .........................P...................................................... 240 ....................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1032400 6 -MLSSNR|IL 0.078 . PBANKA_1032400 16 EYVICSK|GI 0.062 . PBANKA_1032400 30 SNNLVQK|DK 0.097 . PBANKA_1032400 32 NLVQKDK|TP 0.061 . PBANKA_1032400 51 NQANNQK|AI 0.075 . PBANKA_1032400 72 QLENMFK|TL 0.070 . PBANKA_1032400 100 LFGNPSK|YT 0.076 . PBANKA_1032400 104 PSKYTEK|LY 0.065 . PBANKA_1032400 115 QIYDVLK|IK 0.061 . PBANKA_1032400 117 YDVLKIK|GL 0.068 . PBANKA_1032400 123 KGLLNEK|FT 0.061 . PBANKA_1032400 141 IATHLSK|DN 0.067 . PBANKA_1032400 144 HLSKDNK|IS 0.072 . PBANKA_1032400 149 NKISIGK|YC 0.062 . PBANKA_1032400 160 SAAGMAK|PR 0.067 . PBANKA_1032400 162 AGMAKPR|YR 0.095 . PBANKA_1032400 164 MAKPRYR|FL 0.105 . PBANKA_1032400 171 FLVFLLK|YN 0.056 . PBANKA_1032400 175 LLKYNIR|LC 0.070 . PBANKA_1032400 179 NIRLCLK|LA 0.059 . PBANKA_1032400 182 LCLKLAK|RY 0.066 . PBANKA_1032400 183 CLKLAKR|YS 0.155 . PBANKA_1032400 186 LAKRYSR|SV 0.558 *ProP* PBANKA_1032400 195 ISEDTVK|KE 0.057 . PBANKA_1032400 196 SEDTVKK|EY 0.100 . PBANKA_1032400 210 NLDEATK|RY 0.060 . PBANKA_1032400 211 LDEATKR|YE 0.191 . PBANKA_1032400 216 KRYEILK|QN 0.077 . PBANKA_1032400 221 LKQNHEK|FM 0.095 . PBANKA_1032400 228 FMETFLK|VL 0.064 . PBANKA_1032400 234 KVLIGIK|LQ 0.055 . PBANKA_1032400 239 IKLQNSK|KH 0.057 . PBANKA_1032400 240 KLQNSKK|HY 0.118 . PBANKA_1032400 247 HYFSLFK|TN 0.064 . PBANKA_1032400 258 ILFIYGK|ND 0.056 . PBANKA_1032400 270 PYIYTQK|FL 0.072 . PBANKA_1032400 275 QKFLEQK|KE 0.058 . PBANKA_1032400 276 KFLEQKK|EY 0.114 . PBANKA_1032400 280 QKKEYSK|NV 0.068 . PBANKA_1032400 283 EYSKNVK|MI 0.076 . PBANKA_1032400 298 HLVIHEK|FH 0.065 . PBANKA_1032400 311 HLIYFLK|-- 0.067 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1032400 ATGCTTTCCTCAAATAGAATATTGCATGAATATGTTATATGTTCAAAGGGAATTACATAT GCGGTTTATTCTAACAATTTAGTTCAAAAAGATAAAACACCAAATAATGAAACTGCATTA AATGTGAATAATAACCAAGCTAATAATCAAAAGGCTATTATACTCCTTTTACATGGATTA AATGGAGGAACTCATCAACTTGAAAATATGTTTAAAACATTAATTAATAATGGCTATCAA TTTATATCCATAGATTTTTACGGGCATGGTAATAGTAGCTTATTTGGGAACCCAAGCAAA TATACTGAAAAGTTATACACCGAACAAATTTACGATGTTTTAAAAATAAAAGGCCTTTTA AACGAAAAATTTACGGTTATTGCCTTTTCTATGGGATGCATTATAGCTACACATTTGTCT AAGGATAATAAAATAAGCATAGGAAAATATTGCCTTATTAGTGCTGCTGGAATGGCTAAA CCGAGATATCGATTCTTGGTTTTTTTATTAAAATATAATATACGACTTTGTCTAAAATTA GCAAAACGATATAGCCGCTCGGTCATTTCTGAGGACACAGTTAAAAAAGAATATTACAAC TTCGAGAACAATTTAGACGAAGCCACAAAACGATATGAAATTCTTAAACAGAATCACGAA AAATTCATGGAGACGTTTTTAAAGGTGTTGATAGGAATTAAATTACAAAATTCTAAGAAG CATTATTTTTCGTTATTCAAAACAAATGCAGATATCCTTTTCATATATGGAAAAAATGAT ACCTTAACACCCTATATATATACCCAGAAATTTTTAGAACAAAAAAAGGAATATTCAAAA AATGTGAAAATGATAATTATACCAGAATGCTGCCATCTTGTTATACATGAAAAGTTTCAT GAATTAGATCACCATCTTATTTATTTTTTGAAATAA
  • Download Fasta

  • Fasta :-

    MLSSNRILHEYVICSKGITYAVYSNNLVQKDKTPNNETALNVNNNQANNQKAIILLLHGL NGGTHQLENMFKTLINNGYQFISIDFYGHGNSSLFGNPSKYTEKLYTEQIYDVLKIKGLL NEKFTVIAFSMGCIIATHLSKDNKISIGKYCLISAAGMAKPRYRFLVFLLKYNIRLCLKL AKRYSRSVISEDTVKKEYYNFENNLDEATKRYEILKQNHEKFMETFLKVLIGIKLQNSKK HYFSLFKTNADILFIYGKNDTLTPYIYTQKFLEQKKEYSKNVKMIIIPECCHLVIHEKFH ELDHHLIYFLK

    No Results
No Results
No Results
No Results

PBANKA_103240      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India