PBANKA_1033200 | DNA damage-inducible protein 1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1033200OTHER0.9999620.0000380.000001
No Results

  • Fasta :-

    >PBANKA_1033200 MVFITISDDNNIITSLDMHEDTEMFTIMNIIENDFSLNMNINELTYNGKVVDKSDTLKKL NMHEGDLLFIRKKINLDMIQEELNANKFGNIMNNSGVTNTSATNVSTSNTGNILPSSLNN SGQGNNAAFNGILEQFRIFQEMEYIKKEAEKLLQLKTDKTKMSILQIQDKKLYDAINTEN LEEIKKIVKERYEIEKKEKQREKEMYEKALKDPLSEESQKYIYEHIYKNQINSNLALAQE HFPEAFGLVYMLYIPVEINKNVIHAFVDSGAQTSIISKRCAEKCNILRLMDTRFTGIAKG VGTKSILGKIHMIDIKIGNYFYAVALTIIDDYDIDFIFGLDLLKRHQCSIDLKKNALVIE DNEIPFLAEKDIIKRSFENINLDTL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1033200.fa Sequence name : PBANKA_1033200 Sequence length : 385 VALUES OF COMPUTED PARAMETERS Coef20 : 3.773 CoefTot : 0.112 ChDiff : -11 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.718 1.312 -0.030 0.625 MesoH : -0.716 0.480 -0.365 0.235 MuHd_075 : 8.676 10.988 1.817 3.089 MuHd_095 : 7.490 6.419 1.084 1.412 MuHd_100 : 3.808 10.657 2.203 2.566 MuHd_105 : 6.489 13.955 3.882 3.630 Hmax_075 : 5.483 11.200 -0.456 4.240 Hmax_095 : 7.800 10.063 0.196 3.579 Hmax_100 : 7.800 17.300 1.871 5.450 Hmax_105 : 7.117 21.000 2.280 6.417 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9422 0.0578 DFMC : 0.9656 0.0344
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 385 PBANKA_1033200 MVFITISDDNNIITSLDMHEDTEMFTIMNIIENDFSLNMNINELTYNGKVVDKSDTLKKLNMHEGDLLFIRKKINLDMIQ 80 EELNANKFGNIMNNSGVTNTSATNVSTSNTGNILPSSLNNSGQGNNAAFNGILEQFRIFQEMEYIKKEAEKLLQLKTDKT 160 KMSILQIQDKKLYDAINTENLEEIKKIVKERYEIEKKEKQREKEMYEKALKDPLSEESQKYIYEHIYKNQINSNLALAQE 240 HFPEAFGLVYMLYIPVEINKNVIHAFVDSGAQTSIISKRCAEKCNILRLMDTRFTGIAKGVGTKSILGKIHMIDIKIGNY 320 FYAVALTIIDDYDIDFIFGLDLLKRHQCSIDLKKNALVIEDNEIPFLAEKDIIKRSFENINLDTL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1033200 49 ELTYNGK|VV 0.073 . PBANKA_1033200 53 NGKVVDK|SD 0.075 . PBANKA_1033200 58 DKSDTLK|KL 0.075 . PBANKA_1033200 59 KSDTLKK|LN 0.106 . PBANKA_1033200 71 GDLLFIR|KK 0.073 . PBANKA_1033200 72 DLLFIRK|KI 0.074 . PBANKA_1033200 73 LLFIRKK|IN 0.100 . PBANKA_1033200 87 EELNANK|FG 0.062 . PBANKA_1033200 137 GILEQFR|IF 0.084 . PBANKA_1033200 146 QEMEYIK|KE 0.061 . PBANKA_1033200 147 EMEYIKK|EA 0.111 . PBANKA_1033200 151 IKKEAEK|LL 0.064 . PBANKA_1033200 156 EKLLQLK|TD 0.058 . PBANKA_1033200 159 LQLKTDK|TK 0.062 . PBANKA_1033200 161 LKTDKTK|MS 0.067 . PBANKA_1033200 170 ILQIQDK|KL 0.084 . PBANKA_1033200 171 LQIQDKK|LY 0.103 . PBANKA_1033200 185 ENLEEIK|KI 0.060 . PBANKA_1033200 186 NLEEIKK|IV 0.096 . PBANKA_1033200 189 EIKKIVK|ER 0.059 . PBANKA_1033200 191 KKIVKER|YE 0.114 . PBANKA_1033200 196 ERYEIEK|KE 0.066 . PBANKA_1033200 197 RYEIEKK|EK 0.084 . PBANKA_1033200 199 EIEKKEK|QR 0.068 . PBANKA_1033200 201 EKKEKQR|EK 0.129 . PBANKA_1033200 203 KEKQREK|EM 0.060 . PBANKA_1033200 208 EKEMYEK|AL 0.065 . PBANKA_1033200 211 MYEKALK|DP 0.062 . PBANKA_1033200 220 LSEESQK|YI 0.072 . PBANKA_1033200 228 IYEHIYK|NQ 0.058 . PBANKA_1033200 260 IPVEINK|NV 0.081 . PBANKA_1033200 278 QTSIISK|RC 0.059 . PBANKA_1033200 279 TSIISKR|CA 0.376 . PBANKA_1033200 283 SKRCAEK|CN 0.068 . PBANKA_1033200 288 EKCNILR|LM 0.082 . PBANKA_1033200 293 LRLMDTR|FT 0.134 . PBANKA_1033200 299 RFTGIAK|GV 0.085 . PBANKA_1033200 304 AKGVGTK|SI 0.097 . PBANKA_1033200 309 TKSILGK|IH 0.084 . PBANKA_1033200 316 IHMIDIK|IG 0.057 . PBANKA_1033200 344 FGLDLLK|RH 0.052 . PBANKA_1033200 345 GLDLLKR|HQ 0.129 . PBANKA_1033200 353 QCSIDLK|KN 0.065 . PBANKA_1033200 354 CSIDLKK|NA 0.134 . PBANKA_1033200 370 IPFLAEK|DI 0.065 . PBANKA_1033200 374 AEKDIIK|RS 0.057 . PBANKA_1033200 375 EKDIIKR|SF 0.241 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1033200 ATGGTGTTCATAACAATATCTGATGATAATAATATAATAACGAGTCTAGATATGCATGAA GATACTGAAATGTTTACAATAATGAACATAATTGAAAATGATTTTTCTCTTAATATGAAT ATAAATGAATTAACGTATAATGGAAAGGTAGTAGATAAATCAGATACTTTAAAAAAATTG AACATGCATGAAGGTGATCTTTTATTTATCCGAAAAAAAATTAATCTTGATATGATACAA GAGGAATTAAATGCAAACAAGTTTGGAAATATTATGAACAATAGTGGTGTCACTAACACA TCAGCTACTAATGTTAGTACATCCAATACAGGGAATATACTTCCAAGTAGTTTGAATAAT TCGGGGCAAGGAAATAACGCTGCATTTAATGGGATCTTGGAACAGTTTCGTATTTTTCAA GAAATGGAATATATAAAAAAAGAAGCTGAAAAATTACTACAATTAAAAACAGATAAAACA AAGATGAGTATATTACAAATTCAAGATAAAAAATTATATGATGCTATAAATACTGAAAAT TTAGAAGAAATCAAAAAAATAGTAAAAGAAAGATATGAAATAGAAAAAAAAGAAAAACAA AGAGAAAAAGAAATGTATGAAAAAGCATTAAAAGACCCATTATCCGAGGAATCACAAAAA TATATATATGAACATATATATAAAAATCAAATAAATTCAAATCTTGCATTAGCACAGGAA CATTTTCCTGAAGCATTTGGTTTAGTATACATGCTATATATACCTGTTGAAATAAATAAA AATGTTATACATGCATTTGTCGATTCAGGGGCACAAACAAGTATTATATCAAAAAGATGT GCAGAAAAATGTAACATTCTAAGATTAATGGATACACGATTTACTGGTATAGCTAAAGGA GTTGGAACAAAATCTATACTAGGAAAAATACACATGATTGATATTAAAATTGGAAATTAT TTCTATGCTGTTGCATTAACTATAATAGATGATTATGATATCGATTTTATATTTGGCCTA GATTTATTAAAAAGACACCAATGTTCAATTGATTTGAAGAAAAACGCTTTAGTTATCGAA GATAATGAAATACCATTTTTGGCTGAAAAAGATATAATCAAACGATCATTTGAAAACATA AACTTAGACACACTATAG
  • Download Fasta

  • Fasta :-

    MVFITISDDNNIITSLDMHEDTEMFTIMNIIENDFSLNMNINELTYNGKVVDKSDTLKKL NMHEGDLLFIRKKINLDMIQEELNANKFGNIMNNSGVTNTSATNVSTSNTGNILPSSLNN SGQGNNAAFNGILEQFRIFQEMEYIKKEAEKLLQLKTDKTKMSILQIQDKKLYDAINTEN LEEIKKIVKERYEIEKKEKQREKEMYEKALKDPLSEESQKYIYEHIYKNQINSNLALAQE HFPEAFGLVYMLYIPVEINKNVIHAFVDSGAQTSIISKRCAEKCNILRLMDTRFTGIAKG VGTKSILGKIHMIDIKIGNYFYAVALTIIDDYDIDFIFGLDLLKRHQCSIDLKKNALVIE DNEIPFLAEKDIIKRSFENINLDTL

  • title: catalytic motif
  • coordinates: D268,S269,G270
No Results
No Results
IDSitePeptideScoreMethod
PBANKA_1033200215 SKDPLSEESQ0.995unsp

PBANKA_103320      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India