PBANKA_1034400 | plasmepsin IV

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1034400OTHER0.9996170.0003120.000071
No Results

  • Fasta :-

    >PBANKA_1034400 MEYSEKESNYSNGLMRNGSAFGHLKFDNIKSFKIQKKFQALYFIIFICIIGSIFAYMVGT NYYSTKTIDIDKIIANSEYLTIRAKIERPRDKLFKKVMNKNVSNYIKESFKLLKSGLLKK EHLTKYEDSIELDQSLGLSFIGTAELGNNKQSFSFILDTGSANLWVPSKECKSGGCAYKH RYDSSASNTYEKDGTPVSILYGSGGIKGFFSNDMFTIGHHTIPYKFIEVTETDDLEPIYT ASPFDGILGLGWKSLAVGNVEPVIVEMKKTGQIENAVFSFYLPEADDSVGYFTIGGIEES FYTGDVTYEKLTNESYWQINLDVDFGIVALNNANAIVDSGTSAITAPSDFLNKFLNSIMS IPVPFIPLRIVLCHDTNLPTLKFRSKSTEYTIEPKHYLIELDPVGGICAISLIDVDIDAN TFILGDVFFKKYYTIFDYDNSRVGFAVAKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1034400.fa Sequence name : PBANKA_1034400 Sequence length : 450 VALUES OF COMPUTED PARAMETERS Coef20 : 3.315 CoefTot : 0.000 ChDiff : -9 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.424 2.524 0.580 0.923 MesoH : -0.216 0.558 -0.287 0.313 MuHd_075 : 32.351 15.743 9.027 5.954 MuHd_095 : 25.364 11.999 7.483 4.600 MuHd_100 : 36.028 16.422 9.614 5.973 MuHd_105 : 36.840 17.081 9.268 6.190 Hmax_075 : 1.400 -0.817 -1.497 1.307 Hmax_095 : -0.500 -1.100 -2.147 1.820 Hmax_100 : 4.800 -0.600 -1.880 1.380 Hmax_105 : 3.675 1.138 -1.526 1.382 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9512 0.0488 DFMC : 0.9406 0.0594
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 450 PBANKA_1034400 MEYSEKESNYSNGLMRNGSAFGHLKFDNIKSFKIQKKFQALYFIIFICIIGSIFAYMVGTNYYSTKTIDIDKIIANSEYL 80 TIRAKIERPRDKLFKKVMNKNVSNYIKESFKLLKSGLLKKEHLTKYEDSIELDQSLGLSFIGTAELGNNKQSFSFILDTG 160 SANLWVPSKECKSGGCAYKHRYDSSASNTYEKDGTPVSILYGSGGIKGFFSNDMFTIGHHTIPYKFIEVTETDDLEPIYT 240 ASPFDGILGLGWKSLAVGNVEPVIVEMKKTGQIENAVFSFYLPEADDSVGYFTIGGIEESFYTGDVTYEKLTNESYWQIN 320 LDVDFGIVALNNANAIVDSGTSAITAPSDFLNKFLNSIMSIPVPFIPLRIVLCHDTNLPTLKFRSKSTEYTIEPKHYLIE 400 LDPVGGICAISLIDVDIDANTFILGDVFFKKYYTIFDYDNSRVGFAVAKN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1034400 6 -MEYSEK|ES 0.059 . PBANKA_1034400 16 YSNGLMR|NG 0.120 . PBANKA_1034400 25 SAFGHLK|FD 0.064 . PBANKA_1034400 30 LKFDNIK|SF 0.076 . PBANKA_1034400 33 DNIKSFK|IQ 0.062 . PBANKA_1034400 36 KSFKIQK|KF 0.063 . PBANKA_1034400 37 SFKIQKK|FQ 0.115 . PBANKA_1034400 66 TNYYSTK|TI 0.077 . PBANKA_1034400 72 KTIDIDK|II 0.064 . PBANKA_1034400 83 SEYLTIR|AK 0.086 . PBANKA_1034400 85 YLTIRAK|IE 0.058 . PBANKA_1034400 88 IRAKIER|PR 0.115 . PBANKA_1034400 90 AKIERPR|DK 0.098 . PBANKA_1034400 92 IERPRDK|LF 0.069 . PBANKA_1034400 95 PRDKLFK|KV 0.087 . PBANKA_1034400 96 RDKLFKK|VM 0.098 . PBANKA_1034400 100 FKKVMNK|NV 0.085 . PBANKA_1034400 107 NVSNYIK|ES 0.077 . PBANKA_1034400 111 YIKESFK|LL 0.064 . PBANKA_1034400 114 ESFKLLK|SG 0.070 . PBANKA_1034400 119 LKSGLLK|KE 0.058 . PBANKA_1034400 120 KSGLLKK|EH 0.086 . PBANKA_1034400 125 KKEHLTK|YE 0.079 . PBANKA_1034400 150 AELGNNK|QS 0.055 . PBANKA_1034400 169 NLWVPSK|EC 0.063 . PBANKA_1034400 172 VPSKECK|SG 0.125 . PBANKA_1034400 179 SGGCAYK|HR 0.067 . PBANKA_1034400 181 GCAYKHR|YD 0.132 . PBANKA_1034400 192 ASNTYEK|DG 0.069 . PBANKA_1034400 207 YGSGGIK|GF 0.065 . PBANKA_1034400 225 HHTIPYK|FI 0.084 . PBANKA_1034400 253 ILGLGWK|SL 0.075 . PBANKA_1034400 268 PVIVEMK|KT 0.089 . PBANKA_1034400 269 VIVEMKK|TG 0.086 . PBANKA_1034400 310 GDVTYEK|LT 0.063 . PBANKA_1034400 353 PSDFLNK|FL 0.066 . PBANKA_1034400 369 VPFIPLR|IV 0.100 . PBANKA_1034400 382 TNLPTLK|FR 0.074 . PBANKA_1034400 384 LPTLKFR|SK 0.207 . PBANKA_1034400 386 TLKFRSK|ST 0.095 . PBANKA_1034400 395 EYTIEPK|HY 0.061 . PBANKA_1034400 430 LGDVFFK|KY 0.067 . PBANKA_1034400 431 GDVFFKK|YY 0.111 . PBANKA_1034400 442 FDYDNSR|VG 0.075 . PBANKA_1034400 449 VGFAVAK|N- 0.067 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1034400 ATGGAATATTCCGAAAAAGAGTCAAATTACTCCAACGGACTGATGCGAAACGGTTCGGCT TTTGGGCACTTAAAATTTGATAATATAAAAAGCTTTAAAATTCAAAAAAAATTTCAAGCA TTATATTTTATCATATTTATTTGCATAATTGGATCCATATTTGCGTATATGGTTGGAACG AATTACTATTCTACCAAAACCATCGACATAGATAAAATTATTGCAAACTCCGAATATTTA ACAATTCGTGCAAAAATCGAAAGACCACGTGATAAATTATTTAAAAAAGTAATGAATAAA AATGTATCTAATTACATAAAAGAATCATTCAAATTATTAAAATCAGGTTTATTAAAAAAA GAGCACCTTACTAAATATGAGGATTCTATTGAATTAGATCAATCCCTTGGTTTATCATTT ATTGGTACTGCAGAATTAGGAAATAATAAACAATCCTTTTCATTTATCCTTGATACGGGT TCAGCTAATTTATGGGTTCCAAGCAAAGAATGTAAATCAGGAGGTTGTGCATATAAACAC AGATATGATTCATCAGCATCAAATACATATGAAAAAGATGGTACACCAGTAAGTATATTA TATGGATCTGGTGGTATAAAAGGTTTTTTTAGTAATGATATGTTTACTATTGGACATCAC ACAATACCATACAAATTTATTGAAGTAACTGAAACTGACGATTTAGAACCAATTTATACT GCATCTCCATTTGATGGTATTTTAGGATTAGGATGGAAAAGTTTAGCTGTTGGAAATGTA GAACCAGTTATTGTAGAAATGAAAAAAACAGGACAAATTGAAAATGCAGTATTCTCATTC TACTTACCAGAAGCAGATGATTCTGTTGGGTATTTTACTATTGGAGGTATTGAAGAAAGC TTTTATACTGGTGATGTTACCTATGAAAAATTAACTAATGAATCATATTGGCAAATTAAT TTAGATGTAGATTTTGGAATAGTAGCTCTTAACAATGCTAATGCCATTGTTGATAGTGGT ACAAGTGCTATCACAGCTCCATCAGATTTTCTTAATAAATTTTTGAATAGCATAATGAGT ATTCCAGTACCTTTCATTCCCCTCAGAATAGTTTTATGTCACGACACTAACTTACCAACT CTAAAATTCAGATCTAAAAGTACAGAATATACTATTGAACCAAAACATTACTTAATTGAA CTTGACCCAGTCGGCGGAATATGTGCTATATCACTTATAGATGTAGATATTGATGCAAAT ACTTTTATTCTTGGAGATGTATTCTTTAAAAAATACTACACTATTTTTGATTATGATAAT TCAAGAGTTGGTTTTGCAGTTGCAAAAAACTAA
  • Download Fasta

  • Fasta :-

    MEYSEKESNYSNGLMRNGSAFGHLKFDNIKSFKIQKKFQALYFIIFICIIGSIFAYMVGT NYYSTKTIDIDKIIANSEYLTIRAKIERPRDKLFKKVMNKNVSNYIKESFKLLKSGLLKK EHLTKYEDSIELDQSLGLSFIGTAELGNNKQSFSFILDTGSANLWVPSKECKSGGCAYKH RYDSSASNTYEKDGTPVSILYGSGGIKGFFSNDMFTIGHHTIPYKFIEVTETDDLEPIYT ASPFDGILGLGWKSLAVGNVEPVIVEMKKTGQIENAVFSFYLPEADDSVGYFTIGGIEES FYTGDVTYEKLTNESYWQINLDVDFGIVALNNANAIVDSGTSAITAPSDFLNKFLNSIMS IPVPFIPLRIVLCHDTNLPTLKFRSKSTEYTIEPKHYLIELDPVGGICAISLIDVDIDAN TFILGDVFFKKYYTIFDYDNSRVGFAVAKN

  • title: catalytic residue
  • coordinates: D158,D338
No Results
No Results
IDSitePeptideScoreMethod
PBANKA_1034400387 SFRSKSTEYT0.996unsp

PBANKA_103440      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India