PBANKA_1126200 | protein DJ-1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005829      

  • Curated_GO_Components:  cytosol      

  • Curated_GO_Function_IDs:  GO:0008233      

  • Curated_GO_Functions:  peptidase activity      

  • Curated_GO_Processes:  protein deglycation      protein folding      

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1126200OTHER0.9997380.0002220.000040
No Results

  • Fasta :-

    >PBANKA_1126200 MSMKKKALVVVASGSEDVEYITTVDILRRANIDVTTASIHETEKVQLQSKNTVFADTIID KVKDYIFDVIIIPGGMKGSNAISDCQVVIEMLRDQKKNNRLYAAICAAPAIVLHRHSLID DVEAVAYPSFESDFKHIGKGRVCVSKNCVTSLGPGTAVEFALKIVELLLDRESALRLASG FLLHPSITF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1126200.fa Sequence name : PBANKA_1126200 Sequence length : 189 VALUES OF COMPUTED PARAMETERS Coef20 : 3.777 CoefTot : 0.151 ChDiff : -1 ZoneTo : 15 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.788 1.382 0.110 0.515 MesoH : -0.699 0.499 -0.336 0.214 MuHd_075 : 10.473 7.129 3.486 2.425 MuHd_095 : 22.743 13.282 6.673 4.137 MuHd_100 : 19.395 13.628 5.545 4.113 MuHd_105 : 14.131 11.397 3.769 3.338 Hmax_075 : 4.200 9.200 -0.408 3.000 Hmax_095 : 14.400 15.100 2.607 4.860 Hmax_100 : 5.000 12.400 0.423 4.140 Hmax_105 : 5.200 11.600 -0.368 3.540 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9333 0.0667 DFMC : 0.9339 0.0661
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 189 PBANKA_1126200 MSMKKKALVVVASGSEDVEYITTVDILRRANIDVTTASIHETEKVQLQSKNTVFADTIIDKVKDYIFDVIIIPGGMKGSN 80 AISDCQVVIEMLRDQKKNNRLYAAICAAPAIVLHRHSLIDDVEAVAYPSFESDFKHIGKGRVCVSKNCVTSLGPGTAVEF 160 ALKIVELLLDRESALRLASGFLLHPSITF 240 ................................................................................ 80 ................................................................................ 160 ............................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1126200 4 ---MSMK|KK 0.061 . PBANKA_1126200 5 --MSMKK|KA 0.100 . PBANKA_1126200 6 -MSMKKK|AL 0.154 . PBANKA_1126200 28 TTVDILR|RA 0.085 . PBANKA_1126200 29 TVDILRR|AN 0.158 . PBANKA_1126200 44 SIHETEK|VQ 0.062 . PBANKA_1126200 50 KVQLQSK|NT 0.060 . PBANKA_1126200 61 ADTIIDK|VK 0.062 . PBANKA_1126200 63 TIIDKVK|DY 0.074 . PBANKA_1126200 77 IIPGGMK|GS 0.061 . PBANKA_1126200 93 VVIEMLR|DQ 0.075 . PBANKA_1126200 96 EMLRDQK|KN 0.082 . PBANKA_1126200 97 MLRDQKK|NN 0.092 . PBANKA_1126200 100 DQKKNNR|LY 0.081 . PBANKA_1126200 115 PAIVLHR|HS 0.075 . PBANKA_1126200 135 SFESDFK|HI 0.085 . PBANKA_1126200 139 DFKHIGK|GR 0.059 . PBANKA_1126200 141 KHIGKGR|VC 0.081 . PBANKA_1126200 146 GRVCVSK|NC 0.072 . PBANKA_1126200 163 AVEFALK|IV 0.068 . PBANKA_1126200 171 VELLLDR|ES 0.060 . PBANKA_1126200 176 DRESALR|LA 0.097 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1126200 ATGAGTATGAAAAAAAAGGCATTAGTTGTAGTGGCATCAGGTTCTGAAGACGTTGAATAT ATAACAACAGTTGACATATTAAGAAGAGCTAATATTGATGTAACAACAGCTTCAATACAT GAGACAGAAAAGGTTCAGCTCCAATCAAAAAATACCGTTTTTGCTGATACTATTATAGAT AAAGTAAAAGATTATATATTCGACGTAATAATAATACCCGGAGGAATGAAAGGATCTAAT GCTATATCAGATTGCCAAGTTGTTATTGAAATGCTAAGAGATCAAAAAAAAAATAATAGA CTTTATGCAGCTATATGTGCTGCACCTGCAATTGTTCTACATCGACATTCCTTGATTGAT GATGTTGAAGCAGTTGCATACCCCTCTTTTGAAAGTGATTTTAAACACATTGGTAAAGGA AGAGTTTGTGTTTCAAAAAATTGTGTAACATCTCTTGGACCAGGAACAGCTGTAGAATTT GCACTTAAAATTGTAGAATTATTGTTAGATAGAGAATCTGCTCTGAGACTTGCTAGTGGT TTTCTTTTACATCCATCTATTACTTTTTAA
  • Download Fasta

  • Fasta :-

    MSMKKKALVVVASGSEDVEYITTVDILRRANIDVTTASIHETEKVQLQSKNTVFADTIID KVKDYIFDVIIIPGGMKGSNAISDCQVVIEMLRDQKKNNRLYAAICAAPAIVLHRHSLID DVEAVAYPSFESDFKHIGKGRVCVSKNCVTSLGPGTAVEFALKIVELLLDRESALRLASG FLLHPSITF

  • title: conserved cys residue
  • coordinates: C106
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_112620038 SVTTASIHET0.99unspPBANKA_1126200117 SLHRHSLIDD0.997unsp

PBANKA_112620      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India