PBANKA_1127100 | protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1127100OTHER0.9999940.0000020.000004
No Results

  • Fasta :-

    >PBANKA_1127100 MFYKELIDGSCEQNPKNVERNSFGIYIRLLYSFFSVALLIGFSCITNGRKGIFYLLFSFC PSFVYLYLFKKKIKKRIKFSHIVEMVLYGAISSIIFAGFLEYIFSLLCFYFCHTCFLKNV KESYSFACSIVMLLYFFFGVAYVEEFSKICPIFFINSNSIVNEYIELPIIENHNFKNDIT YENNEHNNKFNKFKYIYVDDKFEYIFFSLCSSAGFSSTENLIYFTLTSEHNFLTIIILRN IICVLLHMSCSGISSYNIINNRNNENRKGIMQNILSILRSLFLSSLFHAIYDYSIYCSSL NIPEYQISFFKALFMYSFFSMIFIFFVIIKGSV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1127100.fa Sequence name : PBANKA_1127100 Sequence length : 333 VALUES OF COMPUTED PARAMETERS Coef20 : 3.097 CoefTot : -0.270 ChDiff : 5 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.782 2.571 0.466 0.952 MesoH : 0.896 1.308 0.063 0.535 MuHd_075 : 21.571 15.096 6.648 3.632 MuHd_095 : 35.720 20.048 10.975 6.179 MuHd_100 : 23.378 12.164 7.177 3.267 MuHd_105 : 10.531 4.726 2.729 0.086 Hmax_075 : 0.467 4.025 -0.522 1.435 Hmax_095 : 8.137 10.675 1.798 3.841 Hmax_100 : -1.200 4.100 -0.983 2.120 Hmax_105 : -3.617 2.200 -3.165 1.108 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9536 0.0464 DFMC : 0.9410 0.0590
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 333 PBANKA_1127100 MFYKELIDGSCEQNPKNVERNSFGIYIRLLYSFFSVALLIGFSCITNGRKGIFYLLFSFCPSFVYLYLFKKKIKKRIKFS 80 HIVEMVLYGAISSIIFAGFLEYIFSLLCFYFCHTCFLKNVKESYSFACSIVMLLYFFFGVAYVEEFSKICPIFFINSNSI 160 VNEYIELPIIENHNFKNDITYENNEHNNKFNKFKYIYVDDKFEYIFFSLCSSAGFSSTENLIYFTLTSEHNFLTIIILRN 240 IICVLLHMSCSGISSYNIINNRNNENRKGIMQNILSILRSLFLSSLFHAIYDYSIYCSSLNIPEYQISFFKALFMYSFFS 320 MIFIFFVIIKGSV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1127100 4 ---MFYK|EL 0.072 . PBANKA_1127100 16 SCEQNPK|NV 0.074 . PBANKA_1127100 20 NPKNVER|NS 0.111 . PBANKA_1127100 28 SFGIYIR|LL 0.081 . PBANKA_1127100 49 SCITNGR|KG 0.073 . PBANKA_1127100 50 CITNGRK|GI 0.084 . PBANKA_1127100 70 VYLYLFK|KK 0.056 . PBANKA_1127100 71 YLYLFKK|KI 0.091 . PBANKA_1127100 72 LYLFKKK|IK 0.100 . PBANKA_1127100 74 LFKKKIK|KR 0.061 . PBANKA_1127100 75 FKKKIKK|RI 0.089 . PBANKA_1127100 76 KKKIKKR|IK 0.230 . PBANKA_1127100 78 KIKKRIK|FS 0.091 . PBANKA_1127100 118 CHTCFLK|NV 0.065 . PBANKA_1127100 121 CFLKNVK|ES 0.055 . PBANKA_1127100 148 YVEEFSK|IC 0.055 . PBANKA_1127100 176 IENHNFK|ND 0.076 . PBANKA_1127100 189 NNEHNNK|FN 0.061 . PBANKA_1127100 192 HNNKFNK|FK 0.087 . PBANKA_1127100 194 NKFNKFK|YI 0.092 . PBANKA_1127100 201 YIYVDDK|FE 0.061 . PBANKA_1127100 239 LTIIILR|NI 0.095 . PBANKA_1127100 262 YNIINNR|NN 0.082 . PBANKA_1127100 267 NRNNENR|KG 0.104 . PBANKA_1127100 268 RNNENRK|GI 0.136 . PBANKA_1127100 279 NILSILR|SL 0.075 . PBANKA_1127100 311 YQISFFK|AL 0.063 . PBANKA_1127100 330 IFFVIIK|GS 0.062 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1127100 ATGTTTTATAAAGAATTGATCGATGGCAGCTGTGAGCAAAACCCAAAAAATGTAGAAAGA AATTCCTTTGGAATATATATTCGGTTATTGTATTCTTTTTTTTCTGTGGCATTGCTGATT GGTTTTTCTTGTATAACAAACGGGAGAAAAGGAATATTTTATTTGCTTTTTTCTTTTTGC CCTAGTTTCGTTTATCTTTATCTATTCAAGAAGAAAATAAAGAAACGAATAAAATTTTCA CACATTGTTGAAATGGTATTATATGGAGCTATATCATCGATTATTTTTGCAGGATTTTTA GAATATATTTTCTCACTTCTATGTTTTTATTTTTGTCATACATGTTTTTTAAAAAATGTT AAGGAATCATATTCTTTTGCCTGTTCAATAGTGATGCTATTATACTTTTTTTTTGGGGTA GCATATGTAGAAGAATTTTCAAAAATTTGTCCAATATTTTTTATTAATTCTAATTCAATA GTAAATGAATACATAGAATTGCCTATTATTGAAAATCACAATTTTAAGAATGATATAACA TATGAAAACAATGAACATAATAACAAATTTAATAAGTTTAAATATATTTATGTAGATGAT AAATTCGAATATATATTTTTTTCCTTGTGTTCTTCAGCAGGATTTTCGAGCACAGAAAAC CTAATTTATTTTACATTAACATCAGAACATAATTTTTTGACAATTATAATATTAAGAAAT ATAATTTGTGTCTTATTACATATGTCCTGTTCAGGAATATCATCCTACAACATTATAAAC AATCGAAATAATGAAAATAGAAAAGGAATAATGCAAAACATATTATCGATATTGAGGTCA TTGTTTTTATCATCATTATTTCATGCCATATATGACTATTCCATATATTGCAGTTCATTA AATATCCCTGAATATCAAATTTCATTTTTTAAAGCGTTGTTTATGTATTCTTTTTTTTCA ATGATATTTATATTTTTCGTTATAATTAAAGGATCTGTTTGA
  • Download Fasta

  • Fasta :-

    MFYKELIDGSCEQNPKNVERNSFGIYIRLLYSFFSVALLIGFSCITNGRKGIFYLLFSFC PSFVYLYLFKKKIKKRIKFSHIVEMVLYGAISSIIFAGFLEYIFSLLCFYFCHTCFLKNV KESYSFACSIVMLLYFFFGVAYVEEFSKICPIFFINSNSIVNEYIELPIIENHNFKNDIT YENNEHNNKFNKFKYIYVDDKFEYIFFSLCSSAGFSSTENLIYFTLTSEHNFLTIIILRN IICVLLHMSCSGISSYNIINNRNNENRKGIMQNILSILRSLFLSSLFHAIYDYSIYCSSL NIPEYQISFFKALFMYSFFSMIFIFFVIIKGSV

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PBANKA_112710      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India