PBANKA_1207800 | metalloprotease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:  GO:0008237      

  • Curated_GO_Functions:  metallopeptidase activity      

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1207800OTHER0.9999680.0000130.000018
No Results

  • Fasta :-

    >PBANKA_1207800 MNIKNLDDIKYKIHKIQVLNDNDDKAKTILNKAAEKVQPIMKKRRFLVELLSEFLPTNPN LLGLNILGKSEIKIRLRKKAGGEIFHFNDIIGTLLHELAHLVHRRHDKNFYALLDKLVFE YNELYTYNNINNTYGNNKNKNLISNINENSDSYKNSANNKNNLIILIDDDCKIENTKKSS ICYSQPKLMAAQAAERRLINNFINNDGEIINVSLESCLTEKQRENLIKRKKEYDDKTCLI QNDVIIIDSMSTIPKNKKRKKLTKLENSKYKRNDGDNNICNNNDCL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1207800.fa Sequence name : PBANKA_1207800 Sequence length : 286 VALUES OF COMPUTED PARAMETERS Coef20 : 3.346 CoefTot : -0.259 ChDiff : 12 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.200 1.053 -0.039 0.446 MesoH : -1.442 0.098 -0.661 0.112 MuHd_075 : 3.655 6.146 1.585 1.631 MuHd_095 : 23.042 12.020 5.081 4.218 MuHd_100 : 25.049 16.306 7.224 5.173 MuHd_105 : 26.742 21.689 9.256 6.090 Hmax_075 : -9.100 7.100 -3.479 2.500 Hmax_095 : 1.575 7.613 -1.853 3.089 Hmax_100 : -1.600 6.800 -2.254 2.890 Hmax_105 : 12.133 21.350 2.939 6.907 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9282 0.0718 DFMC : 0.9750 0.0250
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 286 PBANKA_1207800 MNIKNLDDIKYKIHKIQVLNDNDDKAKTILNKAAEKVQPIMKKRRFLVELLSEFLPTNPNLLGLNILGKSEIKIRLRKKA 80 GGEIFHFNDIIGTLLHELAHLVHRRHDKNFYALLDKLVFEYNELYTYNNINNTYGNNKNKNLISNINENSDSYKNSANNK 160 NNLIILIDDDCKIENTKKSSICYSQPKLMAAQAAERRLINNFINNDGEIINVSLESCLTEKQRENLIKRKKEYDDKTCLI 240 QNDVIIIDSMSTIPKNKKRKKLTKLENSKYKRNDGDNNICNNNDCL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1207800 4 ---MNIK|NL 0.064 . PBANKA_1207800 10 KNLDDIK|YK 0.066 . PBANKA_1207800 12 LDDIKYK|IH 0.061 . PBANKA_1207800 15 IKYKIHK|IQ 0.057 . PBANKA_1207800 25 LNDNDDK|AK 0.059 . PBANKA_1207800 27 DNDDKAK|TI 0.064 . PBANKA_1207800 32 AKTILNK|AA 0.097 . PBANKA_1207800 36 LNKAAEK|VQ 0.055 . PBANKA_1207800 42 KVQPIMK|KR 0.057 . PBANKA_1207800 43 VQPIMKK|RR 0.084 . PBANKA_1207800 44 QPIMKKR|RF 0.200 . PBANKA_1207800 45 PIMKKRR|FL 0.231 . PBANKA_1207800 69 GLNILGK|SE 0.087 . PBANKA_1207800 73 LGKSEIK|IR 0.054 . PBANKA_1207800 75 KSEIKIR|LR 0.099 . PBANKA_1207800 77 EIKIRLR|KK 0.084 . PBANKA_1207800 78 IKIRLRK|KA 0.455 . PBANKA_1207800 79 KIRLRKK|AG 0.153 . PBANKA_1207800 104 LAHLVHR|RH 0.098 . PBANKA_1207800 105 AHLVHRR|HD 0.116 . PBANKA_1207800 108 VHRRHDK|NF 0.157 . PBANKA_1207800 116 FYALLDK|LV 0.065 . PBANKA_1207800 138 NTYGNNK|NK 0.055 . PBANKA_1207800 140 YGNNKNK|NL 0.073 . PBANKA_1207800 154 ENSDSYK|NS 0.074 . PBANKA_1207800 160 KNSANNK|NN 0.071 . PBANKA_1207800 172 LIDDDCK|IE 0.058 . PBANKA_1207800 177 CKIENTK|KS 0.063 . PBANKA_1207800 178 KIENTKK|SS 0.109 . PBANKA_1207800 187 ICYSQPK|LM 0.062 . PBANKA_1207800 196 AAQAAER|RL 0.074 . PBANKA_1207800 197 AQAAERR|LI 0.120 . PBANKA_1207800 221 ESCLTEK|QR 0.060 . PBANKA_1207800 223 CLTEKQR|EN 0.084 . PBANKA_1207800 228 QRENLIK|RK 0.071 . PBANKA_1207800 229 RENLIKR|KK 0.164 . PBANKA_1207800 230 ENLIKRK|KE 0.076 . PBANKA_1207800 231 NLIKRKK|EY 0.123 . PBANKA_1207800 236 KKEYDDK|TC 0.060 . PBANKA_1207800 255 SMSTIPK|NK 0.068 . PBANKA_1207800 257 STIPKNK|KR 0.060 . PBANKA_1207800 258 TIPKNKK|RK 0.067 . PBANKA_1207800 259 IPKNKKR|KK 0.260 . PBANKA_1207800 260 PKNKKRK|KL 0.157 . PBANKA_1207800 261 KNKKRKK|LT 0.099 . PBANKA_1207800 264 KRKKLTK|LE 0.066 . PBANKA_1207800 269 TKLENSK|YK 0.063 . PBANKA_1207800 271 LENSKYK|RN 0.071 . PBANKA_1207800 272 ENSKYKR|ND 0.292 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1207800 ATGAACATTAAAAATTTGGATGATATAAAATATAAAATTCACAAAATTCAAGTTTTAAAT GACAATGATGATAAAGCTAAGACGATATTAAATAAGGCTGCTGAAAAAGTGCAGCCAATT ATGAAAAAAAGGCGTTTTTTGGTTGAATTGCTTTCTGAATTTTTACCAACAAATCCAAAC TTGCTAGGTCTCAACATTTTGGGGAAATCTGAAATTAAGATAAGACTTCGAAAAAAAGCG GGGGGAGAAATATTTCACTTTAATGATATAATTGGAACATTATTACATGAATTAGCACAT TTAGTACATAGACGCCACGATAAAAATTTTTATGCGTTACTGGATAAATTAGTTTTTGAA TATAATGAATTGTATACATATAACAATATAAATAATACTTATGGGAATAATAAAAATAAG AATTTAATCAGCAATATCAATGAAAATAGTGATAGTTATAAAAACAGTGCTAACAATAAA AATAATCTAATAATTTTAATTGATGACGATTGTAAAATTGAAAATACTAAGAAAAGTTCT ATTTGTTATTCTCAACCCAAACTTATGGCTGCACAAGCAGCAGAAAGACGATTAATAAAT AATTTTATAAATAATGATGGAGAAATAATAAACGTATCTCTTGAAAGTTGTTTAACAGAA AAACAACGTGAAAACTTAATAAAAAGGAAAAAAGAATATGATGATAAAACATGTTTAATA CAAAATGACGTTATTATAATTGATTCGATGAGTACTATTCCGAAAAATAAAAAAAGGAAA AAATTGACGAAGTTGGAAAACAGCAAATACAAGAGAAATGATGGAGATAATAACATTTGT AATAATAATGATTGTTTATAA
  • Download Fasta

  • Fasta :-

    MNIKNLDDIKYKIHKIQVLNDNDDKAKTILNKAAEKVQPIMKKRRFLVELLSEFLPTNPN LLGLNILGKSEIKIRLRKKAGGEIFHFNDIIGTLLHELAHLVHRRHDKNFYALLDKLVFE YNELYTYNNINNTYGNNKNKNLISNINENSDSYKNSANNKNNLIILIDDDCKIENTKKSS ICYSQPKLMAAQAAERRLINNFINNDGEIINVSLESCLTEKQRENLIKRKKEYDDKTCLI QNDVIIIDSMSTIPKNKKRKKLTKLENSKYKRNDGDNNICNNNDCL

    No Results
  • title: Zn binding site
  • coordinates: H96,H100,H106
No Results
No Results
No Results

PBANKA_120780      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India