PBANKA_1220300 | prodrug activation and resistance esterase, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1220300OTHER0.9996420.0000370.000321
No Results

  • Fasta :-

    >PBANKA_1220300 MFTNQSIENDKQKPCSSDAKTKKNEKLDGKPKTDTFHNKNGLAIKTYAWEIKNPVAIIFL IHGLSGNARLEYLKHNIILKGYEKAILKDGNNFYIYKGSWIEEFNKKGISVYGLDLQGHG LSEGWENLKKHVKEFDDMVYDVLQFINRVHDTLCLEKHKNDINNGDNTNSLHNNIINTKL PPFYIMGQSMGGNIVMRLLETLGKSKDITTNNNKINIKGAISLAGMISIEEIINKPSYKY FYLPFSKVLSTTFPSLRVIPQLYFKKFPYVNDIYYFDKNVCKKSITCKLGYELFKAVQNL NNDISYFPKDVSLLFVHSKVDSACFFNGVQTFFNKIESDKKELFVLEDMDHVLTMEPGNE RILKKVTEWILNLSSKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1220300.fa Sequence name : PBANKA_1220300 Sequence length : 377 VALUES OF COMPUTED PARAMETERS Coef20 : 3.348 CoefTot : -0.177 ChDiff : 9 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.124 1.353 -0.036 0.549 MesoH : -0.585 0.187 -0.426 0.199 MuHd_075 : 27.920 17.314 8.074 4.174 MuHd_095 : 2.118 7.061 3.446 1.945 MuHd_100 : 9.375 2.876 1.521 1.023 MuHd_105 : 12.133 2.265 2.552 0.683 Hmax_075 : -0.788 -0.525 -3.179 0.600 Hmax_095 : -7.700 -3.150 -3.483 0.446 Hmax_100 : -12.100 -5.500 -4.407 -0.690 Hmax_105 : -7.817 -6.067 -4.086 -0.455 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9718 0.0282 DFMC : 0.9374 0.0626
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 377 PBANKA_1220300 MFTNQSIENDKQKPCSSDAKTKKNEKLDGKPKTDTFHNKNGLAIKTYAWEIKNPVAIIFLIHGLSGNARLEYLKHNIILK 80 GYEKAILKDGNNFYIYKGSWIEEFNKKGISVYGLDLQGHGLSEGWENLKKHVKEFDDMVYDVLQFINRVHDTLCLEKHKN 160 DINNGDNTNSLHNNIINTKLPPFYIMGQSMGGNIVMRLLETLGKSKDITTNNNKINIKGAISLAGMISIEEIINKPSYKY 240 FYLPFSKVLSTTFPSLRVIPQLYFKKFPYVNDIYYFDKNVCKKSITCKLGYELFKAVQNLNNDISYFPKDVSLLFVHSKV 320 DSACFFNGVQTFFNKIESDKKELFVLEDMDHVLTMEPGNERILKKVTEWILNLSSKN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1220300 11 QSIENDK|QK 0.058 . PBANKA_1220300 13 IENDKQK|PC 0.081 . PBANKA_1220300 20 PCSSDAK|TK 0.066 . PBANKA_1220300 22 SSDAKTK|KN 0.073 . PBANKA_1220300 23 SDAKTKK|NE 0.092 . PBANKA_1220300 26 KTKKNEK|LD 0.060 . PBANKA_1220300 30 NEKLDGK|PK 0.065 . PBANKA_1220300 32 KLDGKPK|TD 0.061 . PBANKA_1220300 39 TDTFHNK|NG 0.070 . PBANKA_1220300 45 KNGLAIK|TY 0.067 . PBANKA_1220300 52 TYAWEIK|NP 0.069 . PBANKA_1220300 69 GLSGNAR|LE 0.090 . PBANKA_1220300 74 ARLEYLK|HN 0.060 . PBANKA_1220300 80 KHNIILK|GY 0.075 . PBANKA_1220300 84 ILKGYEK|AI 0.063 . PBANKA_1220300 88 YEKAILK|DG 0.056 . PBANKA_1220300 97 NNFYIYK|GS 0.074 . PBANKA_1220300 106 WIEEFNK|KG 0.058 . PBANKA_1220300 107 IEEFNKK|GI 0.147 . PBANKA_1220300 129 EGWENLK|KH 0.057 . PBANKA_1220300 130 GWENLKK|HV 0.154 . PBANKA_1220300 133 NLKKHVK|EF 0.073 . PBANKA_1220300 148 VLQFINR|VH 0.072 . PBANKA_1220300 157 DTLCLEK|HK 0.060 . PBANKA_1220300 159 LCLEKHK|ND 0.061 . PBANKA_1220300 179 NNIINTK|LP 0.057 . PBANKA_1220300 197 GGNIVMR|LL 0.131 . PBANKA_1220300 204 LLETLGK|SK 0.075 . PBANKA_1220300 206 ETLGKSK|DI 0.070 . PBANKA_1220300 214 ITTNNNK|IN 0.059 . PBANKA_1220300 218 NNKINIK|GA 0.073 . PBANKA_1220300 235 IEEIINK|PS 0.063 . PBANKA_1220300 239 INKPSYK|YF 0.067 . PBANKA_1220300 247 FYLPFSK|VL 0.061 . PBANKA_1220300 257 TTFPSLR|VI 0.079 . PBANKA_1220300 265 IPQLYFK|KF 0.060 . PBANKA_1220300 266 PQLYFKK|FP 0.085 . PBANKA_1220300 278 DIYYFDK|NV 0.077 . PBANKA_1220300 282 FDKNVCK|KS 0.067 . PBANKA_1220300 283 DKNVCKK|SI 0.242 . PBANKA_1220300 288 KKSITCK|LG 0.071 . PBANKA_1220300 295 LGYELFK|AV 0.075 . PBANKA_1220300 309 DISYFPK|DV 0.123 . PBANKA_1220300 319 LLFVHSK|VD 0.073 . PBANKA_1220300 335 VQTFFNK|IE 0.064 . PBANKA_1220300 340 NKIESDK|KE 0.062 . PBANKA_1220300 341 KIESDKK|EL 0.097 . PBANKA_1220300 361 MEPGNER|IL 0.084 . PBANKA_1220300 364 GNERILK|KV 0.198 . PBANKA_1220300 365 NERILKK|VT 0.165 . PBANKA_1220300 376 ILNLSSK|N- 0.073 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1220300 ATGTTTACCAATCAATCAATAGAAAACGATAAACAAAAACCATGTAGCTCAGATGCGAAA ACTAAAAAAAATGAAAAATTAGACGGAAAACCTAAAACTGATACATTTCATAATAAAAAT GGATTAGCTATAAAAACATATGCATGGGAAATAAAAAACCCAGTGGCGATTATATTTTTA ATTCATGGGCTAAGTGGAAATGCGCGTTTAGAATATTTAAAACATAATATCATATTAAAA GGGTATGAAAAAGCTATACTAAAAGATGGAAATAACTTTTATATATATAAAGGTAGTTGG ATTGAAGAATTTAATAAAAAAGGAATTAGTGTATATGGATTAGATTTACAAGGGCATGGC TTATCAGAAGGATGGGAAAATTTAAAAAAACATGTTAAAGAATTTGATGATATGGTATAT GATGTTTTACAATTTATTAATAGAGTCCATGATACATTATGTCTAGAAAAACATAAAAAT GATATTAATAATGGTGATAATACAAACTCTTTACATAATAATATTATAAATACAAAATTA CCTCCATTTTATATTATGGGGCAATCAATGGGTGGAAATATAGTTATGCGTCTTTTAGAA ACTTTAGGAAAATCTAAAGATATAACAACTAATAATAATAAAATAAATATAAAGGGTGCT ATATCATTAGCAGGTATGATATCTATTGAAGAAATAATAAACAAACCATCATACAAATAT TTTTATTTACCATTTTCAAAAGTGTTATCAACTACTTTTCCTAGTTTACGAGTTATTCCA CAATTATATTTTAAAAAATTTCCATATGTAAATGATATATATTATTTTGATAAAAATGTA TGTAAAAAATCAATTACTTGTAAACTTGGTTATGAATTATTTAAGGCTGTTCAAAATTTA AATAATGATATTAGTTATTTTCCAAAAGATGTTTCATTATTATTTGTTCATTCAAAGGTT GATAGTGCTTGTTTTTTTAATGGAGTTCAAACATTTTTTAATAAAATCGAATCAGATAAA AAAGAATTATTTGTTTTAGAAGACATGGATCATGTTTTAACTATGGAGCCAGGAAATGAA AGAATTTTAAAAAAGGTTACAGAATGGATATTAAATTTATCATCTAAAAATTAA
  • Download Fasta

  • Fasta :-

    MFTNQSIENDKQKPCSSDAKTKKNEKLDGKPKTDTFHNKNGLAIKTYAWEIKNPVAIIFL IHGLSGNARLEYLKHNIILKGYEKAILKDGNNFYIYKGSWIEEFNKKGISVYGLDLQGHG LSEGWENLKKHVKEFDDMVYDVLQFINRVHDTLCLEKHKNDINNGDNTNSLHNNIINTKL PPFYIMGQSMGGNIVMRLLETLGKSKDITTNNNKINIKGAISLAGMISIEEIINKPSYKY FYLPFSKVLSTTFPSLRVIPQLYFKKFPYVNDIYYFDKNVCKKSITCKLGYELFKAVQNL NNDISYFPKDVSLLFVHSKVDSACFFNGVQTFFNKIESDKKELFVLEDMDHVLTMEPGNE RILKKVTEWILNLSSKN

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PBANKA_122030      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India