Loading, please wait...
_ID
Prediction
OTHER
SP
mTP
CS_Position
PBANKA_1222500 SP 0.098351 0.901567 0.000083 CS pos: 25-26. IKC-NK. Pr: 0.8169
Showing 1 to 1 of 1 rows
No Results
  • Fasta :-

    >PBANKA_1222500 MKSIKILPVFYLVTFFLHNYNEIKCNKVYISGDNFMPCSECKDINKCGGCLFDNNEFLPS AIELKLTKKNRDNNNHDNLKIHHDSLKLGNVKYYVKRGEGVSGSFGNASGNDINSMAKIH NEIKNRTENKEENKSSLSFIDHINNNLGEGKGGYNFSRIQKHEQDGDKINAQEEFEKIKS QVVDKSVVSFSDRVLDENEGQTQPSKGVTVEETSDNVFLVPLQHLRDSQFVGKLLVGTPP QEIHPIFDTGSTNLWVVTTECKEDSCKKVHQYNPNKSKTFRRSFIKQNLHIVFGSGSITG TLGKDNFILGNHIIRNQTFGLVKSETSDNLNNADNVFEYINFEGIVGLGFPGMLTAGNIP FFDNLLKQYKNMTPQFSFYISPNDETSTFIVGGISKSYYEGDIYMLPVVKEYYWEVKLDA IYIGDEKICCEEESYAIFDSGTSYNTMPSTQISNFFKIVSSKPCNEENYNNILKEYPTIK YVFGKLVIELLPNEYMIVNDDLCVPAYMQIDVPSENNNAYLLGTIAFMRHYFTVFVRGQE GNPSMVGVAKAKQV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1222500.fa Sequence name : PBANKA_1222500 Sequence length : 554 VALUES OF COMPUTED PARAMETERS Coef20 : 4.061 CoefTot : -0.822 ChDiff : -11 ZoneTo : 21 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.612 1.582 0.167 0.652 MesoH : -0.273 0.290 -0.362 0.283 MuHd_075 : 14.557 10.970 5.453 3.264 MuHd_095 : 9.271 9.374 2.882 1.805 MuHd_100 : 15.165 13.103 5.093 2.807 MuHd_105 : 25.026 18.432 8.628 4.705 Hmax_075 : 16.917 20.300 3.361 7.187 Hmax_095 : 15.800 15.600 2.234 6.380 Hmax_100 : 16.800 21.000 3.504 7.360 Hmax_105 : 19.250 21.000 3.787 6.920 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8826 0.1174 DFMC : 0.8671 0.1329
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 554 PBANKA_1222500 MKSIKILPVFYLVTFFLHNYNEIKCNKVYISGDNFMPCSECKDINKCGGCLFDNNEFLPSAIELKLTKKNRDNNNHDNLK 80 IHHDSLKLGNVKYYVKRGEGVSGSFGNASGNDINSMAKIHNEIKNRTENKEENKSSLSFIDHINNNLGEGKGGYNFSRIQ 160 KHEQDGDKINAQEEFEKIKSQVVDKSVVSFSDRVLDENEGQTQPSKGVTVEETSDNVFLVPLQHLRDSQFVGKLLVGTPP 240 QEIHPIFDTGSTNLWVVTTECKEDSCKKVHQYNPNKSKTFRRSFIKQNLHIVFGSGSITGTLGKDNFILGNHIIRNQTFG 320 LVKSETSDNLNNADNVFEYINFEGIVGLGFPGMLTAGNIPFFDNLLKQYKNMTPQFSFYISPNDETSTFIVGGISKSYYE 400 GDIYMLPVVKEYYWEVKLDAIYIGDEKICCEEESYAIFDSGTSYNTMPSTQISNFFKIVSSKPCNEENYNNILKEYPTIK 480 YVFGKLVIELLPNEYMIVNDDLCVPAYMQIDVPSENNNAYLLGTIAFMRHYFTVFVRGQEGNPSMVGVAKAKQV 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1222500 2 -----MK|SI 0.083 . PBANKA_1222500 5 --MKSIK|IL 0.060 . PBANKA_1222500 24 HNYNEIK|CN 0.067 . PBANKA_1222500 27 NEIKCNK|VY 0.060 . PBANKA_1222500 42 MPCSECK|DI 0.098 . PBANKA_1222500 46 ECKDINK|CG 0.062 . PBANKA_1222500 65 PSAIELK|LT 0.064 . PBANKA_1222500 68 IELKLTK|KN 0.060 . PBANKA_1222500 69 ELKLTKK|NR 0.082 . PBANKA_1222500 71 KLTKKNR|DN 0.123 . PBANKA_1222500 80 NNHDNLK|IH 0.070 . PBANKA_1222500 87 IHHDSLK|LG 0.062 . PBANKA_1222500 92 LKLGNVK|YY 0.062 . PBANKA_1222500 96 NVKYYVK|RG 0.058 . PBANKA_1222500 97 VKYYVKR|GE 0.250 . PBANKA_1222500 118 DINSMAK|IH 0.062 . PBANKA_1222500 124 KIHNEIK|NR 0.059 . PBANKA_1222500 126 HNEIKNR|TE 0.103 . PBANKA_1222500 130 KNRTENK|EE 0.067 . PBANKA_1222500 134 ENKEENK|SS 0.075 . PBANKA_1222500 151 NNLGEGK|GG 0.059 . PBANKA_1222500 158 GGYNFSR|IQ 0.103 . PBANKA_1222500 161 NFSRIQK|HE 0.149 . PBANKA_1222500 168 HEQDGDK|IN 0.069 . PBANKA_1222500 177 AQEEFEK|IK 0.075 . PBANKA_1222500 179 EEFEKIK|SQ 0.069 . PBANKA_1222500 185 KSQVVDK|SV 0.104 . PBANKA_1222500 193 VVSFSDR|VL 0.135 . PBANKA_1222500 206 GQTQPSK|GV 0.086 . PBANKA_1222500 226 VPLQHLR|DS 0.095 . PBANKA_1222500 233 DSQFVGK|LL 0.068 . PBANKA_1222500 262 VVTTECK|ED 0.057 . PBANKA_1222500 267 CKEDSCK|KV 0.090 . PBANKA_1222500 268 KEDSCKK|VH 0.071 . PBANKA_1222500 276 HQYNPNK|SK 0.073 . PBANKA_1222500 278 YNPNKSK|TF 0.066 . PBANKA_1222500 281 NKSKTFR|RS 0.137 . PBANKA_1222500 282 KSKTFRR|SF 0.435 . PBANKA_1222500 286 FRRSFIK|QN 0.076 . PBANKA_1222500 304 ITGTLGK|DN 0.076 . PBANKA_1222500 315 LGNHIIR|NQ 0.088 . PBANKA_1222500 323 QTFGLVK|SE 0.062 . PBANKA_1222500 367 FFDNLLK|QY 0.063 . PBANKA_1222500 370 NLLKQYK|NM 0.065 . PBANKA_1222500 396 IVGGISK|SY 0.076 . PBANKA_1222500 410 YMLPVVK|EY 0.058 . PBANKA_1222500 417 EYYWEVK|LD 0.061 . PBANKA_1222500 427 IYIGDEK|IC 0.057 . PBANKA_1222500 457 QISNFFK|IV 0.116 . PBANKA_1222500 462 FKIVSSK|PC 0.065 . PBANKA_1222500 474 NYNNILK|EY 0.062 . PBANKA_1222500 480 KEYPTIK|YV 0.103 . PBANKA_1222500 485 IKYVFGK|LV 0.106 . PBANKA_1222500 529 GTIAFMR|HY 0.108 . PBANKA_1222500 537 YFTVFVR|GQ 0.101 . PBANKA_1222500 550 SMVGVAK|AK 0.075 . PBANKA_1222500 552 VGVAKAK|QV 0.090 . ____________________________^_________________
  • Fasta :-

    >PBANKA_1222500 ATGAAGAGCATAAAAATATTACCCGTATTTTATTTGGTGACATTTTTTTTGCACAACTAT AATGAGATAAAATGTAACAAAGTATACATATCTGGAGATAATTTTATGCCTTGTTCAGAA TGTAAAGATATAAATAAGTGTGGTGGTTGTTTGTTTGATAACAATGAGTTTTTACCTAGT GCAATAGAATTAAAATTGACGAAAAAAAACAGGGATAACAATAATCATGATAATTTAAAA ATTCACCATGATTCATTAAAATTAGGAAATGTAAAATATTATGTAAAAAGAGGAGAAGGT GTTTCAGGAAGTTTTGGGAATGCTTCAGGAAATGACATAAACAGTATGGCTAAGATTCAT AATGAAATAAAAAATCGAACAGAAAATAAGGAAGAAAATAAATCGTCTTTAAGTTTCATT GATCATATTAATAATAATCTGGGAGAAGGAAAAGGAGGTTATAATTTTTCAAGAATACAA AAACATGAACAGGATGGAGATAAAATAAATGCACAAGAAGAATTTGAGAAAATAAAAAGT CAAGTTGTTGATAAATCTGTAGTTTCATTCTCTGATCGTGTTTTAGATGAAAATGAAGGT CAAACTCAGCCTTCCAAAGGTGTGACTGTTGAAGAAACAAGTGATAATGTGTTTTTAGTT CCTTTACAACATTTAAGAGATAGTCAGTTTGTTGGTAAGTTATTAGTAGGTACACCTCCT CAAGAAATTCATCCAATATTCGATACAGGAAGTACAAATTTATGGGTAGTTACAACTGAA TGTAAAGAAGATTCATGTAAAAAAGTACATCAATATAATCCTAATAAATCTAAAACATTT AGAAGATCTTTTATAAAACAAAATTTGCATATTGTTTTTGGATCTGGGTCAATAACTGGT ACATTAGGTAAAGACAATTTTATATTGGGCAATCATATAATACGCAATCAAACTTTTGGG TTAGTTAAAAGTGAAACTAGTGATAATTTAAATAATGCTGATAATGTTTTTGAATATATA AATTTTGAAGGTATAGTAGGGTTAGGTTTTCCTGGTATGCTAACTGCAGGAAATATTCCA TTTTTCGATAATTTATTAAAACAATATAAAAATATGACACCTCAATTTTCTTTTTATATA TCTCCAAATGATGAAACATCTACATTTATAGTTGGTGGAATAAGCAAATCATATTATGAA GGAGATATATATATGTTACCTGTTGTTAAAGAATATTATTGGGAAGTTAAGTTAGATGCT ATATATATAGGAGATGAAAAAATATGTTGCGAAGAGGAAAGTTATGCAATATTTGATTCA GGAACTTCTTACAATACAATGCCTAGTACTCAAATAAGTAATTTTTTTAAGATTGTTTCA TCAAAACCATGTAATGAAGAAAATTATAACAATATATTAAAAGAATATCCAACTATAAAA TATGTTTTTGGAAAGTTAGTAATTGAACTATTACCCAATGAATATATGATTGTAAATGAC GATTTATGTGTTCCAGCTTATATGCAGATCGATGTTCCATCAGAAAATAATAATGCTTAT CTTCTTGGAACTATAGCTTTTATGAGACATTACTTTACAGTTTTTGTAAGAGGGCAAGAA GGGAATCCATCTATGGTTGGGGTGGCAAAAGCTAAACAGGTTTAA
  • Download Fasta
  • Fasta :-

    MKSIKILPVFYLVTFFLHNYNEIKCNKVYISGDNFMPCSECKDINKCGGCLFDNNEFLPS AIELKLTKKNRDNNNHDNLKIHHDSLKLGNVKYYVKRGEGVSGSFGNASGNDINSMAKIH NEIKNRTENKEENKSSLSFIDHINNNLGEGKGGYNFSRIQKHEQDGDKINAQEEFEKIKS QVVDKSVVSFSDRVLDENEGQTQPSKGVTVEETSDNVFLVPLQHLRDSQFVGKLLVGTPP QEIHPIFDTGSTNLWVVTTECKEDSCKKVHQYNPNKSKTFRRSFIKQNLHIVFGSGSITG TLGKDNFILGNHIIRNQTFGLVKSETSDNLNNADNVFEYINFEGIVGLGFPGMLTAGNIP FFDNLLKQYKNMTPQFSFYISPNDETSTFIVGGISKSYYEGDIYMLPVVKEYYWEVKLDA IYIGDEKICCEEESYAIFDSGTSYNTMPSTQISNFFKIVSSKPCNEENYNNILKEYPTIK YVFGKLVIELLPNEYMIVNDDLCVPAYMQIDVPSENNNAYLLGTIAFMRHYFTVFVRGQE GNPSMVGVAKAKQV

  • title: catalytic residue
  • coordinates: D248,D439
No Results
No Results
Loading, please wait...
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
PBANKA_1222500 381 S SFYISPNDE 0.992 unsp PBANKA_1222500 381 S SFYISPNDE 0.992 unsp PBANKA_1222500 381 S SFYISPNDE 0.992 unsp PBANKA_1222500 397 S GISKSYYEG 0.994 unsp PBANKA_1222500 435 Y EEESYAIFD 0.99 unsp PBANKA_1222500 138 S KSSLSFIDH 0.993 unsp PBANKA_1222500 189 S KSVVSFSDR 0.993 unsp
Showing 1 to 1 of 1 rows

PBANKA_122250      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India