PBANKA_1225600 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PBANKA_1225600OTHER0.9997190.0002430.000038
No Results

  • Fasta :-

    >PBANKA_1225600 MGNLLNKIIFNAPHEGLYEKLDIDFIYIETEDNEKIAAHYINRNNLLTILFCHGNSENIY MLYDYFYEVSETWNVNILLYDYPGYGESTGIATEENMYKSGYAVYDYMVNTLNIKPETII LYGRSIGSCAAVDIAINRKVKGVILQSAILSLFNICFKTRYILPFDSLCNIKKIDMIPCY VFFIHGMNDKIVPFYHGLALYEKCKMKVCPYWVANGKHNDVELIDNKKFNENIKFFLNFL NNS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1225600.fa Sequence name : PBANKA_1225600 Sequence length : 243 VALUES OF COMPUTED PARAMETERS Coef20 : 2.984 CoefTot : -0.872 ChDiff : -5 ZoneTo : 14 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.941 1.618 0.146 0.524 MesoH : -0.282 0.806 -0.203 0.302 MuHd_075 : 14.837 13.045 4.911 3.939 MuHd_095 : 37.154 27.684 12.327 7.807 MuHd_100 : 27.162 19.990 9.969 5.845 MuHd_105 : 13.446 11.056 6.338 3.540 Hmax_075 : 10.150 12.133 0.363 5.437 Hmax_095 : 17.800 19.900 3.751 6.740 Hmax_100 : 16.000 15.700 3.288 6.120 Hmax_105 : 6.800 12.600 0.710 4.900 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9596 0.0404 DFMC : 0.9732 0.0268
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 243 PBANKA_1225600 MGNLLNKIIFNAPHEGLYEKLDIDFIYIETEDNEKIAAHYINRNNLLTILFCHGNSENIYMLYDYFYEVSETWNVNILLY 80 DYPGYGESTGIATEENMYKSGYAVYDYMVNTLNIKPETIILYGRSIGSCAAVDIAINRKVKGVILQSAILSLFNICFKTR 160 YILPFDSLCNIKKIDMIPCYVFFIHGMNDKIVPFYHGLALYEKCKMKVCPYWVANGKHNDVELIDNKKFNENIKFFLNFL 240 NNS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1225600 7 MGNLLNK|II 0.074 . PBANKA_1225600 20 HEGLYEK|LD 0.059 . PBANKA_1225600 35 ETEDNEK|IA 0.058 . PBANKA_1225600 43 AAHYINR|NN 0.070 . PBANKA_1225600 99 TEENMYK|SG 0.097 . PBANKA_1225600 115 VNTLNIK|PE 0.058 . PBANKA_1225600 124 TIILYGR|SI 0.143 . PBANKA_1225600 138 VDIAINR|KV 0.122 . PBANKA_1225600 139 DIAINRK|VK 0.094 . PBANKA_1225600 141 AINRKVK|GV 0.228 . PBANKA_1225600 158 LFNICFK|TR 0.059 . PBANKA_1225600 160 NICFKTR|YI 0.096 . PBANKA_1225600 172 DSLCNIK|KI 0.064 . PBANKA_1225600 173 SLCNIKK|ID 0.083 . PBANKA_1225600 190 IHGMNDK|IV 0.066 . PBANKA_1225600 203 GLALYEK|CK 0.064 . PBANKA_1225600 205 ALYEKCK|MK 0.058 . PBANKA_1225600 207 YEKCKMK|VC 0.060 . PBANKA_1225600 217 YWVANGK|HN 0.069 . PBANKA_1225600 227 VELIDNK|KF 0.056 . PBANKA_1225600 228 ELIDNKK|FN 0.101 . PBANKA_1225600 234 KFNENIK|FF 0.069 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1225600 ATGGGGAATCTTCTAAATAAAATTATCTTTAATGCTCCGCATGAAGGGCTTTATGAAAAA TTAGATATAGATTTTATTTATATTGAAACAGAAGATAACGAAAAAATAGCAGCACATTAT ATTAATAGGAATAACTTACTAACAATTTTGTTTTGCCATGGAAATAGTGAGAACATTTAT ATGTTATATGACTATTTTTACGAAGTATCAGAAACATGGAATGTAAATATATTATTGTAT GATTATCCTGGATATGGGGAAAGCACAGGAATAGCAACCGAAGAAAATATGTACAAAAGT GGATATGCAGTTTATGACTATATGGTAAATACTCTAAACATAAAGCCAGAAACCATTATT TTATACGGAAGATCTATAGGATCATGTGCAGCTGTGGATATAGCGATTAACAGGAAAGTA AAAGGAGTAATCCTACAAAGTGCTATATTATCTTTATTCAATATATGTTTTAAAACTAGA TACATTTTACCATTTGATTCCTTATGTAACATTAAAAAGATTGATATGATACCATGTTAT GTCTTTTTTATTCATGGAATGAATGATAAAATTGTCCCATTTTATCATGGATTAGCTCTA TATGAAAAATGCAAAATGAAGGTGTGCCCCTATTGGGTTGCCAATGGAAAACATAACGAT GTTGAATTAATTGACAATAAAAAATTCAACGAAAACATCAAGTTTTTCCTAAATTTTTTA AATAATTCATAA
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  • Fasta :-

    MGNLLNKIIFNAPHEGLYEKLDIDFIYIETEDNEKIAAHYINRNNLLTILFCHGNSENIY MLYDYFYEVSETWNVNILLYDYPGYGESTGIATEENMYKSGYAVYDYMVNTLNIKPETII LYGRSIGSCAAVDIAINRKVKGVILQSAILSLFNICFKTRYILPFDSLCNIKKIDMIPCY VFFIHGMNDKIVPFYHGLALYEKCKMKVCPYWVANGKHNDVELIDNKKFNENIKFFLNFL NNS

    No Results
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PBANKA_122560      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India