Loading, please wait...
_ID
Prediction
OTHER
SP
mTP
CS_Position
PBANKA_1242000 OTHER 0.999913 0.000032 0.000055
Showing 1 to 1 of 1 rows
No Results
  • Fasta :-

    >PBANKA_1242000 MTIVKVTVKWKTNIYNDLELNINEPIALFKEQLWKITSVPPEKQKLMYKGLIKNDTNLHT LNIKNNDKIMLVGSSELLAEKPDKITFFEDLSKEDKEKLNEDKNIIFEEQGIVNLGNTCY FNAVLQFLTSFNDLGEFLSNIKKTQNFGFRSNKDILFDCYIHFSQTFGKSSKPYVPLELL KAFRDVFPKFKTINIRTKQYAQQDAEECMNAILTSLNDHTESKIIDKLFSFKIIGKIKCV EQNSQDDEPNKQKESQKNENSQKPESDKNNPSQNEENDHFELTQEKHNKLICYMGTQNTP VNHLHEGIRLSLIEKIKKKKNDNDKEDTLYEKKSEIDSLPPYLIIHFLRFESKRIVDTSN TVSVVTAKICRKVSFPEIFDIYDFCSDRIKADLKISRNIIMNRKDIKTPIVQENKNEDDK MLETLTNQDDKNKEFVEIPNGEYELISVITHKGRNEESGHYIAWKKMRNRVNKNSEYDAN GPRTKKNKSNNEPTWFKMDDDKVSLHNFSSLDLFGGCSDYNTAVLLLYKRKTISCTKDEL NKYSV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1242000.fa Sequence name : PBANKA_1242000 Sequence length : 545 VALUES OF COMPUTED PARAMETERS Coef20 : 3.992 CoefTot : -0.764 ChDiff : 1 ZoneTo : 16 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.900 1.076 -0.021 0.454 MesoH : -0.825 0.118 -0.504 0.150 MuHd_075 : 5.547 13.288 3.883 2.989 MuHd_095 : 26.930 19.147 9.084 6.480 MuHd_100 : 23.716 20.408 8.117 6.464 MuHd_105 : 15.656 16.434 5.329 4.978 Hmax_075 : 1.750 13.800 -0.977 3.820 Hmax_095 : 6.213 11.100 -0.051 4.209 Hmax_100 : 5.900 11.900 0.025 4.860 Hmax_105 : 6.900 14.000 0.093 4.387 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8497 0.1503 DFMC : 0.8787 0.1213
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 545 PBANKA_1242000 MTIVKVTVKWKTNIYNDLELNINEPIALFKEQLWKITSVPPEKQKLMYKGLIKNDTNLHTLNIKNNDKIMLVGSSELLAE 80 KPDKITFFEDLSKEDKEKLNEDKNIIFEEQGIVNLGNTCYFNAVLQFLTSFNDLGEFLSNIKKTQNFGFRSNKDILFDCY 160 IHFSQTFGKSSKPYVPLELLKAFRDVFPKFKTINIRTKQYAQQDAEECMNAILTSLNDHTESKIIDKLFSFKIIGKIKCV 240 EQNSQDDEPNKQKESQKNENSQKPESDKNNPSQNEENDHFELTQEKHNKLICYMGTQNTPVNHLHEGIRLSLIEKIKKKK 320 NDNDKEDTLYEKKSEIDSLPPYLIIHFLRFESKRIVDTSNTVSVVTAKICRKVSFPEIFDIYDFCSDRIKADLKISRNII 400 MNRKDIKTPIVQENKNEDDKMLETLTNQDDKNKEFVEIPNGEYELISVITHKGRNEESGHYIAWKKMRNRVNKNSEYDAN 480 GPRTKKNKSNNEPTWFKMDDDKVSLHNFSSLDLFGGCSDYNTAVLLLYKRKTISCTKDELNKYSV 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................P.............................................. 400 ................................................................................ 480 ................................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1242000 5 --MTIVK|VT 0.056 . PBANKA_1242000 9 IVKVTVK|WK 0.064 . PBANKA_1242000 11 KVTVKWK|TN 0.061 . PBANKA_1242000 30 EPIALFK|EQ 0.067 . PBANKA_1242000 35 FKEQLWK|IT 0.064 . PBANKA_1242000 43 TSVPPEK|QK 0.060 . PBANKA_1242000 45 VPPEKQK|LM 0.067 . PBANKA_1242000 49 KQKLMYK|GL 0.072 . PBANKA_1242000 53 MYKGLIK|ND 0.055 . PBANKA_1242000 64 LHTLNIK|NN 0.062 . PBANKA_1242000 68 NIKNNDK|IM 0.056 . PBANKA_1242000 81 SELLAEK|PD 0.053 . PBANKA_1242000 84 LAEKPDK|IT 0.067 . PBANKA_1242000 93 FFEDLSK|ED 0.057 . PBANKA_1242000 96 DLSKEDK|EK 0.062 . PBANKA_1242000 98 SKEDKEK|LN 0.077 . PBANKA_1242000 103 EKLNEDK|NI 0.070 . PBANKA_1242000 142 EFLSNIK|KT 0.054 . PBANKA_1242000 143 FLSNIKK|TQ 0.098 . PBANKA_1242000 150 TQNFGFR|SN 0.217 . PBANKA_1242000 153 FGFRSNK|DI 0.116 . PBANKA_1242000 169 FSQTFGK|SS 0.101 . PBANKA_1242000 172 TFGKSSK|PY 0.067 . PBANKA_1242000 181 VPLELLK|AF 0.068 . PBANKA_1242000 184 ELLKAFR|DV 0.198 . PBANKA_1242000 189 FRDVFPK|FK 0.084 . PBANKA_1242000 191 DVFPKFK|TI 0.066 . PBANKA_1242000 196 FKTINIR|TK 0.085 . PBANKA_1242000 198 TINIRTK|QY 0.084 . PBANKA_1242000 223 NDHTESK|II 0.074 . PBANKA_1242000 227 ESKIIDK|LF 0.065 . PBANKA_1242000 232 DKLFSFK|II 0.081 . PBANKA_1242000 236 SFKIIGK|IK 0.065 . PBANKA_1242000 238 KIIGKIK|CV 0.088 . PBANKA_1242000 251 QDDEPNK|QK 0.065 . PBANKA_1242000 253 DEPNKQK|ES 0.069 . PBANKA_1242000 257 KQKESQK|NE 0.065 . PBANKA_1242000 263 KNENSQK|PE 0.074 . PBANKA_1242000 268 QKPESDK|NN 0.061 . PBANKA_1242000 286 FELTQEK|HN 0.056 . PBANKA_1242000 289 TQEKHNK|LI 0.089 . PBANKA_1242000 309 HLHEGIR|LS 0.071 . PBANKA_1242000 315 RLSLIEK|IK 0.064 . PBANKA_1242000 317 SLIEKIK|KK 0.061 . PBANKA_1242000 318 LIEKIKK|KK 0.083 . PBANKA_1242000 319 IEKIKKK|KN 0.101 . PBANKA_1242000 320 EKIKKKK|ND 0.153 . PBANKA_1242000 325 KKNDNDK|ED 0.068 . PBANKA_1242000 332 EDTLYEK|KS 0.054 . PBANKA_1242000 333 DTLYEKK|SE 0.109 . PBANKA_1242000 349 LIIHFLR|FE 0.122 . PBANKA_1242000 353 FLRFESK|RI 0.066 . PBANKA_1242000 354 LRFESKR|IV 0.502 *ProP* PBANKA_1242000 368 VSVVTAK|IC 0.069 . PBANKA_1242000 371 VTAKICR|KV 0.114 . PBANKA_1242000 372 TAKICRK|VS 0.092 . PBANKA_1242000 388 YDFCSDR|IK 0.073 . PBANKA_1242000 390 FCSDRIK|AD 0.063 . PBANKA_1242000 394 RIKADLK|IS 0.065 . PBANKA_1242000 397 ADLKISR|NI 0.089 . PBANKA_1242000 403 RNIIMNR|KD 0.083 . PBANKA_1242000 404 NIIMNRK|DI 0.095 . PBANKA_1242000 407 MNRKDIK|TP 0.071 . PBANKA_1242000 415 PIVQENK|NE 0.058 . PBANKA_1242000 420 NKNEDDK|ML 0.074 . PBANKA_1242000 431 LTNQDDK|NK 0.068 . PBANKA_1242000 433 NQDDKNK|EF 0.064 . PBANKA_1242000 452 ISVITHK|GR 0.067 . PBANKA_1242000 454 VITHKGR|NE 0.090 . PBANKA_1242000 465 GHYIAWK|KM 0.061 . PBANKA_1242000 466 HYIAWKK|MR 0.093 . PBANKA_1242000 468 IAWKKMR|NR 0.095 . PBANKA_1242000 470 WKKMRNR|VN 0.097 . PBANKA_1242000 473 MRNRVNK|NS 0.229 . PBANKA_1242000 483 YDANGPR|TK 0.074 . PBANKA_1242000 485 ANGPRTK|KN 0.059 . PBANKA_1242000 486 NGPRTKK|NK 0.331 . PBANKA_1242000 488 PRTKKNK|SN 0.092 . PBANKA_1242000 497 NEPTWFK|MD 0.067 . PBANKA_1242000 502 FKMDDDK|VS 0.061 . PBANKA_1242000 529 AVLLLYK|RK 0.051 . PBANKA_1242000 530 VLLLYKR|KT 0.112 . PBANKA_1242000 531 LLLYKRK|TI 0.091 . PBANKA_1242000 537 KTISCTK|DE 0.057 . PBANKA_1242000 542 TKDELNK|YS 0.062 . ____________________________^_________________
  • Fasta :-

    >PBANKA_1242000 ATGACAATAGTTAAGGTAACAGTAAAATGGAAAACAAATATTTACAATGATCTAGAGCTC AATATAAATGAGCCAATAGCATTGTTTAAAGAGCAGCTATGGAAAATAACTTCTGTTCCT CCAGAAAAACAAAAACTAATGTATAAAGGGTTAATAAAAAATGACACCAATTTGCATACA TTAAACATAAAAAATAATGACAAAATTATGTTAGTAGGATCTTCAGAATTATTGGCTGAA AAACCTGATAAAATTACATTTTTTGAAGATTTATCAAAAGAAGATAAAGAAAAATTAAAT GAAGATAAAAATATTATTTTCGAAGAACAAGGTATAGTAAATTTAGGAAATACTTGTTAT TTTAATGCAGTTTTGCAATTTTTGACTTCTTTTAATGATTTAGGAGAATTTTTAAGTAAT ATAAAAAAAACACAAAATTTTGGATTTAGATCAAATAAAGATATTTTATTCGATTGCTAT ATACATTTTTCTCAAACTTTTGGAAAATCATCGAAGCCATATGTTCCCTTAGAGTTATTA AAAGCCTTTAGAGATGTTTTCCCAAAATTTAAAACTATTAATATAAGAACAAAACAATAT GCACAACAAGATGCAGAAGAATGTATGAATGCTATTCTTACCTCATTAAATGATCATACA GAATCGAAAATTATTGATAAGCTTTTTTCATTTAAAATAATTGGAAAAATTAAATGTGTA GAACAAAATAGTCAAGATGATGAACCTAATAAACAAAAAGAGTCACAAAAAAATGAAAAT TCACAAAAACCAGAATCAGACAAAAATAATCCAAGTCAAAATGAAGAAAATGACCATTTT GAATTAACACAAGAAAAACACAACAAATTAATTTGTTATATGGGGACGCAAAATACCCCA GTAAATCATCTTCATGAAGGTATTAGATTATCATTAATTGAAAAAATAAAAAAAAAAAAA AACGACAATGATAAAGAAGATACATTATATGAAAAAAAATCAGAAATAGATTCATTACCT CCTTATTTAATTATACATTTTTTACGGTTTGAATCAAAACGAATTGTAGATACAAGTAAT ACGGTTTCTGTTGTTACTGCCAAAATATGTAGAAAGGTTTCCTTTCCAGAAATTTTTGAT ATTTATGATTTTTGCTCTGATAGGATAAAGGCTGATTTAAAAATTTCTAGAAATATTATT ATGAACAGAAAGGATATTAAAACACCCATTGTTCAGGAAAATAAAAATGAAGACGATAAA ATGTTGGAAACTTTGACTAACCAGGATGATAAAAACAAAGAATTTGTTGAAATCCCAAAC GGAGAGTATGAACTAATTTCAGTTATCACACATAAAGGAAGAAATGAAGAAAGTGGACAT TATATTGCATGGAAAAAAATGCGAAATCGTGTAAATAAAAATTCAGAGTATGATGCTAAT GGCCCAAGAACTAAAAAAAATAAAAGTAATAATGAACCAACATGGTTTAAAATGGATGAT GATAAAGTAAGTCTTCACAATTTTTCATCTCTTGATTTATTTGGAGGATGTAGTGATTAC AATACAGCTGTTTTGTTATTATACAAAAGGAAGACAATTTCTTGTACAAAAGACGAATTA AACAAATACTCTGTTTGA
  • Download Fasta
  • Fasta :-

    MTIVKVTVKWKTNIYNDLELNINEPIALFKEQLWKITSVPPEKQKLMYKGLIKNDTNLHT LNIKNNDKIMLVGSSELLAEKPDKITFFEDLSKEDKEKLNEDKNIIFEEQGIVNLGNTCY FNAVLQFLTSFNDLGEFLSNIKKTQNFGFRSNKDILFDCYIHFSQTFGKSSKPYVPLELL KAFRDVFPKFKTINIRTKQYAQQDAEECMNAILTSLNDHTESKIIDKLFSFKIIGKIKCV EQNSQDDEPNKQKESQKNENSQKPESDKNNPSQNEENDHFELTQEKHNKLICYMGTQNTP VNHLHEGIRLSLIEKIKKKKNDNDKEDTLYEKKSEIDSLPPYLIIHFLRFESKRIVDTSN TVSVVTAKICRKVSFPEIFDIYDFCSDRIKADLKISRNIIMNRKDIKTPIVQENKNEDDK MLETLTNQDDKNKEFVEIPNGEYELISVITHKGRNEESGHYIAWKKMRNRVNKNSEYDAN GPRTKKNKSNNEPTWFKMDDDKVSLHNFSSLDLFGGCSDYNTAVLLLYKRKTISCTKDEL NKYSV

  • title: Active Site
  • coordinates: N114,C119,H460,D500
No Results
No Results
Loading, please wait...
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
PBANKA_1242000 334 S YEKKSEIDS 0.995 unsp PBANKA_1242000 334 S YEKKSEIDS 0.995 unsp PBANKA_1242000 334 S YEKKSEIDS 0.995 unsp PBANKA_1242000 489 S KKNKSNNEP 0.993 unsp PBANKA_1242000 92 S FEDLSKEDK 0.997 unsp PBANKA_1242000 266 S QKPESDKNN 0.998 unsp
Showing 1 to 1 of 1 rows

PBANKA_124200      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India