PBANKA_1320700 | signal peptide peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1320700OTHER0.9999430.0000030.000055
No Results

  • Fasta :-

    >PBANKA_1320700 MNLLKLIGKNKKMKNHDKRNSAIYYSCYAIIVLTIILSRFIVIPLILQMTLYTFITIYIG SHESIRQLEADDKTQKTDHITTYDAIMFPIIGSAALLTLYFAYKFLDPYYVNLLLTVYLT MAGVFSLQSVFSTVLEPFFPKIFKKDEFVKTINAPKFISKDPIVFNTNKGEIMSLIVCFI IGARWIFYKDFVTHNILAISFCFQALSLVILSNFVIGFILLSGLFVYDIFWVFGNDVMVT VAKSFEAPVKLLFPVSLDPLHYSMLGLGDIIIPGILISLCLRFDYYLHRNKIHKGNVKKM FNDISIHESFKKYYFYTITVFYQAGLILTYCMLFYFEHAQPALLYLVPACILAIVGCALF KKEFKIMIKYQEITDKSSNADDGKKKTLEKEETLKSQESIMSVTKRKINAK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1320700.fa Sequence name : PBANKA_1320700 Sequence length : 411 VALUES OF COMPUTED PARAMETERS Coef20 : 3.402 CoefTot : -1.647 ChDiff : 13 ZoneTo : 62 KR : 8 DE : 1 CleavSite : 49 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.071 2.735 0.602 0.861 MesoH : 1.008 1.558 0.071 0.604 MuHd_075 : 28.905 30.868 8.846 9.358 MuHd_095 : 17.653 14.788 4.566 4.205 MuHd_100 : 20.182 15.514 6.055 5.290 MuHd_105 : 30.770 21.617 9.554 7.594 Hmax_075 : -8.300 29.750 5.756 9.217 Hmax_095 : 16.625 19.512 -5.603 6.982 Hmax_100 : 17.700 3.100 -3.240 1.060 Hmax_105 : -2.217 8.167 -2.261 2.987 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8940 0.1060 DFMC : 0.6005 0.3995
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 411 PBANKA_1320700 MNLLKLIGKNKKMKNHDKRNSAIYYSCYAIIVLTIILSRFIVIPLILQMTLYTFITIYIGSHESIRQLEADDKTQKTDHI 80 TTYDAIMFPIIGSAALLTLYFAYKFLDPYYVNLLLTVYLTMAGVFSLQSVFSTVLEPFFPKIFKKDEFVKTINAPKFISK 160 DPIVFNTNKGEIMSLIVCFIIGARWIFYKDFVTHNILAISFCFQALSLVILSNFVIGFILLSGLFVYDIFWVFGNDVMVT 240 VAKSFEAPVKLLFPVSLDPLHYSMLGLGDIIIPGILISLCLRFDYYLHRNKIHKGNVKKMFNDISIHESFKKYYFYTITV 320 FYQAGLILTYCMLFYFEHAQPALLYLVPACILAIVGCALFKKEFKIMIKYQEITDKSSNADDGKKKTLEKEETLKSQESI 400 MSVTKRKINAK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1320700 5 --MNLLK|LI 0.073 . PBANKA_1320700 9 LLKLIGK|NK 0.061 . PBANKA_1320700 11 KLIGKNK|KM 0.060 . PBANKA_1320700 12 LIGKNKK|MK 0.093 . PBANKA_1320700 14 GKNKKMK|NH 0.083 . PBANKA_1320700 18 KMKNHDK|RN 0.076 . PBANKA_1320700 19 MKNHDKR|NS 0.257 . PBANKA_1320700 39 LTIILSR|FI 0.079 . PBANKA_1320700 66 GSHESIR|QL 0.126 . PBANKA_1320700 73 QLEADDK|TQ 0.057 . PBANKA_1320700 76 ADDKTQK|TD 0.057 . PBANKA_1320700 104 TLYFAYK|FL 0.082 . PBANKA_1320700 141 LEPFFPK|IF 0.064 . PBANKA_1320700 144 FFPKIFK|KD 0.059 . PBANKA_1320700 145 FPKIFKK|DE 0.140 . PBANKA_1320700 150 KKDEFVK|TI 0.065 . PBANKA_1320700 156 KTINAPK|FI 0.076 . PBANKA_1320700 160 APKFISK|DP 0.070 . PBANKA_1320700 169 IVFNTNK|GE 0.064 . PBANKA_1320700 184 CFIIGAR|WI 0.085 . PBANKA_1320700 189 ARWIFYK|DF 0.082 . PBANKA_1320700 243 VMVTVAK|SF 0.090 . PBANKA_1320700 250 SFEAPVK|LL 0.067 . PBANKA_1320700 282 LISLCLR|FD 0.079 . PBANKA_1320700 289 FDYYLHR|NK 0.087 . PBANKA_1320700 291 YYLHRNK|IH 0.054 . PBANKA_1320700 294 HRNKIHK|GN 0.091 . PBANKA_1320700 298 IHKGNVK|KM 0.062 . PBANKA_1320700 299 HKGNVKK|MF 0.134 . PBANKA_1320700 311 SIHESFK|KY 0.066 . PBANKA_1320700 312 IHESFKK|YY 0.116 . PBANKA_1320700 361 VGCALFK|KE 0.060 . PBANKA_1320700 362 GCALFKK|EF 0.104 . PBANKA_1320700 365 LFKKEFK|IM 0.064 . PBANKA_1320700 369 EFKIMIK|YQ 0.064 . PBANKA_1320700 376 YQEITDK|SS 0.078 . PBANKA_1320700 384 SNADDGK|KK 0.065 . PBANKA_1320700 385 NADDGKK|KT 0.094 . PBANKA_1320700 386 ADDGKKK|TL 0.145 . PBANKA_1320700 390 KKKTLEK|EE 0.056 . PBANKA_1320700 395 EKEETLK|SQ 0.078 . PBANKA_1320700 405 SIMSVTK|RK 0.061 . PBANKA_1320700 406 IMSVTKR|KI 0.369 . PBANKA_1320700 407 MSVTKRK|IN 0.100 . PBANKA_1320700 411 KRKINAK|-- 0.081 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1320700 ATGAATTTACTAAAGTTAATTGGAAAGAATAAAAAAATGAAGAATCACGACAAGCGGAAT TCAGCAATATACTACTCGTGTTATGCAATTATAGTTTTAACTATAATTTTGTCGAGGTTT ATTGTGATACCCTTAATACTACAAATGACTTTATACACATTTATAACGATATATATCGGA AGCCATGAAAGCATAAGACAATTGGAAGCGGATGATAAAACCCAAAAGACTGACCATATA ACGACATATGATGCAATAATGTTTCCAATTATTGGATCAGCTGCTTTATTAACACTGTAT TTTGCCTACAAGTTTTTAGATCCATATTATGTGAATCTGTTGCTAACCGTTTATTTAACA ATGGCAGGAGTATTTTCTCTGCAAAGCGTTTTCTCGACTGTTTTGGAACCCTTTTTTCCA AAAATTTTTAAGAAAGATGAATTTGTTAAAACTATTAATGCTCCAAAGTTTATTTCAAAG GATCCAATTGTATTTAATACAAATAAAGGAGAAATTATGAGTTTGATTGTTTGTTTCATA ATTGGTGCACGATGGATATTTTACAAAGACTTTGTTACACACAACATTTTAGCAATTTCC TTTTGCTTCCAAGCACTCTCATTGGTCATTTTAAGCAACTTCGTAATTGGATTCATACTA TTATCTGGATTATTCGTGTATGATATATTTTGGGTCTTTGGAAATGACGTTATGGTTACT GTTGCAAAGTCATTTGAAGCTCCTGTAAAACTATTGTTTCCAGTGTCGTTAGATCCATTG CATTATAGCATGCTTGGTTTAGGAGATATAATTATTCCAGGAATTTTAATATCTTTATGC TTACGTTTTGATTATTATTTGCATAGAAATAAAATACATAAAGGAAATGTTAAGAAAATG TTTAATGATATATCTATTCATGAATCTTTCAAGAAATATTATTTTTATACAATAACAGTA TTTTATCAAGCAGGTTTAATATTAACATATTGTATGCTCTTTTATTTTGAACATGCTCAG CCAGCTTTATTGTATTTAGTACCTGCTTGTATATTGGCCATAGTAGGATGCGCATTATTC AAAAAAGAATTTAAAATAATGATTAAATATCAAGAAATTACAGATAAAAGCTCAAATGCA GATGACGGAAAGAAAAAGACCCTCGAAAAAGAAGAAACACTTAAAAGCCAAGAATCAATT ATGTCAGTTACGAAAAGAAAAATTAATGCTAAATAA
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  • Fasta :-

    MNLLKLIGKNKKMKNHDKRNSAIYYSCYAIIVLTIILSRFIVIPLILQMTLYTFITIYIG SHESIRQLEADDKTQKTDHITTYDAIMFPIIGSAALLTLYFAYKFLDPYYVNLLLTVYLT MAGVFSLQSVFSTVLEPFFPKIFKKDEFVKTINAPKFISKDPIVFNTNKGEIMSLIVCFI IGARWIFYKDFVTHNILAISFCFQALSLVILSNFVIGFILLSGLFVYDIFWVFGNDVMVT VAKSFEAPVKLLFPVSLDPLHYSMLGLGDIIIPGILISLCLRFDYYLHRNKIHKGNVKKM FNDISIHESFKKYYFYTITVFYQAGLILTYCMLFYFEHAQPALLYLVPACILAIVGCALF KKEFKIMIKYQEITDKSSNADDGKKKTLEKEETLKSQESIMSVTKRKINAK

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PBANKA_132070      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India