PBANKA_1338700 | plasmepsin V, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1338700SP0.0101050.9898430.000052CS pos: 22-23. VQA-NT. Pr: 0.7298
No Results

  • Fasta :-

    >PBANKA_1338700 MCFSKLYNFITYFIIINILVQANTENEDILNKNSEKNEEIYKYKLYGDIDEYAYYFMDIN IGTPGQKLSLIVDTGSSSLSFPCSECKDCGVHMENPFNLNNSSTSSILYCNDNICPYNLK CVKGRCEYLQSYCEGSRINGFYFSDIVRLESNNNTKNGNITFKKHMGCHMHEEGLFLHQH ATGVLGLSLTKPKGVPTFIDLLFKSSPKLNKIFSLCISEYGGELILGGYSKDYIVKEVSI DEKKDNIEHNKNENINSINKSIVDGILWEAITRKYYYYIRVKGFQLFGTTFSHNNKSMEM LVDSGSTFTHLPDDLYNNLNFFFDILCIHNMNNPIDIEKKLKITNETLSNHLLYFDDFKS TLKNIISSENVCVKIADNVQCWRYLENLPNIYIKLSNNTKLVWQPSSYLYKKESFWCKGL EKQVNDKPILGLSFFKNKQIIFDLKNNKIGFIESNCPSNPINTRPRTFNEYNIKENHLFK QSYFSLYAFSIIIALTFILYIILYIKKFICSYYNPLHG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1338700.fa Sequence name : PBANKA_1338700 Sequence length : 518 VALUES OF COMPUTED PARAMETERS Coef20 : 4.532 CoefTot : -0.487 ChDiff : 2 ZoneTo : 24 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.324 2.718 0.518 0.965 MesoH : -0.444 0.264 -0.352 0.235 MuHd_075 : 21.704 24.725 8.062 5.528 MuHd_095 : 19.037 17.567 6.720 5.073 MuHd_100 : 13.184 12.331 4.389 3.849 MuHd_105 : 17.630 16.689 4.904 5.236 Hmax_075 : 19.600 29.517 5.693 8.867 Hmax_095 : 16.975 19.775 4.638 7.096 Hmax_100 : 14.800 17.400 3.237 5.980 Hmax_105 : 22.700 26.367 4.830 8.600 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8290 0.1710 DFMC : 0.9470 0.0530
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 518 PBANKA_1338700 MCFSKLYNFITYFIIINILVQANTENEDILNKNSEKNEEIYKYKLYGDIDEYAYYFMDINIGTPGQKLSLIVDTGSSSLS 80 FPCSECKDCGVHMENPFNLNNSSTSSILYCNDNICPYNLKCVKGRCEYLQSYCEGSRINGFYFSDIVRLESNNNTKNGNI 160 TFKKHMGCHMHEEGLFLHQHATGVLGLSLTKPKGVPTFIDLLFKSSPKLNKIFSLCISEYGGELILGGYSKDYIVKEVSI 240 DEKKDNIEHNKNENINSINKSIVDGILWEAITRKYYYYIRVKGFQLFGTTFSHNNKSMEMLVDSGSTFTHLPDDLYNNLN 320 FFFDILCIHNMNNPIDIEKKLKITNETLSNHLLYFDDFKSTLKNIISSENVCVKIADNVQCWRYLENLPNIYIKLSNNTK 400 LVWQPSSYLYKKESFWCKGLEKQVNDKPILGLSFFKNKQIIFDLKNNKIGFIESNCPSNPINTRPRTFNEYNIKENHLFK 480 QSYFSLYAFSIIIALTFILYIILYIKKFICSYYNPLHG 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1338700 5 --MCFSK|LY 0.060 . PBANKA_1338700 32 NEDILNK|NS 0.062 . PBANKA_1338700 36 LNKNSEK|NE 0.062 . PBANKA_1338700 42 KNEEIYK|YK 0.062 . PBANKA_1338700 44 EEIYKYK|LY 0.088 . PBANKA_1338700 67 IGTPGQK|LS 0.057 . PBANKA_1338700 87 FPCSECK|DC 0.082 . PBANKA_1338700 120 ICPYNLK|CV 0.060 . PBANKA_1338700 123 YNLKCVK|GR 0.062 . PBANKA_1338700 125 LKCVKGR|CE 0.100 . PBANKA_1338700 137 SYCEGSR|IN 0.082 . PBANKA_1338700 148 YFSDIVR|LE 0.075 . PBANKA_1338700 156 ESNNNTK|NG 0.063 . PBANKA_1338700 163 NGNITFK|KH 0.071 . PBANKA_1338700 164 GNITFKK|HM 0.155 . PBANKA_1338700 191 LGLSLTK|PK 0.056 . PBANKA_1338700 193 LSLTKPK|GV 0.086 . PBANKA_1338700 204 FIDLLFK|SS 0.067 . PBANKA_1338700 208 LFKSSPK|LN 0.055 . PBANKA_1338700 211 SSPKLNK|IF 0.067 . PBANKA_1338700 231 ILGGYSK|DY 0.084 . PBANKA_1338700 236 SKDYIVK|EV 0.085 . PBANKA_1338700 243 EVSIDEK|KD 0.060 . PBANKA_1338700 244 VSIDEKK|DN 0.110 . PBANKA_1338700 251 DNIEHNK|NE 0.059 . PBANKA_1338700 260 NINSINK|SI 0.093 . PBANKA_1338700 273 LWEAITR|KY 0.075 . PBANKA_1338700 274 WEAITRK|YY 0.096 . PBANKA_1338700 280 KYYYYIR|VK 0.093 . PBANKA_1338700 282 YYYIRVK|GF 0.062 . PBANKA_1338700 296 TFSHNNK|SM 0.102 . PBANKA_1338700 339 NPIDIEK|KL 0.061 . PBANKA_1338700 340 PIDIEKK|LK 0.093 . PBANKA_1338700 342 DIEKKLK|IT 0.069 . PBANKA_1338700 359 LYFDDFK|ST 0.075 . PBANKA_1338700 363 DFKSTLK|NI 0.060 . PBANKA_1338700 374 SENVCVK|IA 0.090 . PBANKA_1338700 383 DNVQCWR|YL 0.094 . PBANKA_1338700 394 LPNIYIK|LS 0.065 . PBANKA_1338700 400 KLSNNTK|LV 0.073 . PBANKA_1338700 411 PSSYLYK|KE 0.070 . PBANKA_1338700 412 SSYLYKK|ES 0.100 . PBANKA_1338700 418 KESFWCK|GL 0.110 . PBANKA_1338700 422 WCKGLEK|QV 0.074 . PBANKA_1338700 427 EKQVNDK|PI 0.060 . PBANKA_1338700 436 LGLSFFK|NK 0.061 . PBANKA_1338700 438 LSFFKNK|QI 0.073 . PBANKA_1338700 445 QIIFDLK|NN 0.062 . PBANKA_1338700 448 FDLKNNK|IG 0.056 . PBANKA_1338700 464 SNPINTR|PR 0.082 . PBANKA_1338700 466 PINTRPR|TF 0.092 . PBANKA_1338700 474 FNEYNIK|EN 0.060 . PBANKA_1338700 480 KENHLFK|QS 0.075 . PBANKA_1338700 506 YIILYIK|KF 0.053 . PBANKA_1338700 507 IILYIKK|FI 0.092 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1338700 ATGTGTTTTTCTAAATTATATAATTTTATTACTTATTTTATAATAATAAATATTTTAGTT CAAGCAAATACTGAAAATGAAGATATATTGAATAAAAATAGCGAAAAAAATGAGGAAATA TACAAATATAAATTATATGGAGATATTGATGAATATGCATATTATTTTATGGATATAAAT ATAGGAACACCTGGGCAAAAACTTTCACTAATAGTAGACACTGGATCGTCTTCGCTAAGT TTCCCATGTTCAGAATGTAAAGATTGTGGGGTGCATATGGAAAATCCTTTTAATTTAAAT AATTCATCAACGTCATCGATTTTATATTGTAATGATAATATTTGCCCATATAATTTAAAA TGTGTAAAAGGAAGATGTGAATATTTACAATCTTATTGTGAGGGATCTCGAATTAACGGT TTTTATTTTTCGGATATTGTAAGGCTCGAATCGAACAATAATACTAAAAATGGAAACATA ACTTTTAAGAAACATATGGGATGTCATATGCATGAAGAAGGGTTATTTTTACATCAACAT GCGACGGGAGTATTGGGGTTAAGTTTAACAAAACCAAAAGGTGTACCGACTTTTATTGAT TTATTATTTAAAAGTTCCCCTAAATTAAATAAGATATTTTCATTGTGTATTTCTGAATAT GGAGGTGAACTAATTTTAGGGGGATATAGCAAAGACTATATTGTCAAAGAAGTTTCAATT GATGAAAAGAAAGATAATATTGAACATAATAAGAATGAAAATATTAATTCGATTAATAAA TCGATTGTAGATGGTATACTTTGGGAAGCTATAACTAGAAAATATTATTATTATATAAGA GTCAAAGGATTTCAATTATTTGGTACAACTTTTTCTCATAATAACAAAAGTATGGAAATG CTAGTAGATTCTGGTAGTACTTTTACACATCTACCTGATGATTTATATAATAATTTGAAT TTTTTTTTTGATATATTATGTATACACAATATGAACAATCCTATTGATATAGAGAAAAAA TTAAAAATAACAAATGAAACGCTAAGCAACCATCTTTTATATTTTGATGATTTTAAATCT ACACTAAAAAATATAATAAGTAGTGAAAATGTGTGTGTAAAAATAGCTGACAATGTACAA TGTTGGAGATATTTAGAAAATTTACCAAATATATATATTAAACTATCTAATAATACTAAA CTAGTATGGCAACCTAGTTCTTATTTATATAAAAAAGAATCATTTTGGTGTAAAGGACTA GAAAAACAAGTAAATGACAAACCTATTCTTGGATTGAGTTTTTTTAAAAATAAACAAATT ATATTTGATCTTAAAAATAATAAAATTGGGTTTATTGAATCAAATTGTCCATCTAATCCG ATTAATACAAGACCGAGAACTTTTAATGAGTATAATATAAAAGAAAATCATTTATTCAAA CAATCATATTTTAGTTTATATGCCTTTTCCATAATTATTGCCTTAACATTTATACTTTAC ATTATCTTATACATTAAAAAGTTTATATGTTCCTATTACAACCCATTGCATGGATAA
  • Download Fasta

  • Fasta :-

    MCFSKLYNFITYFIIINILVQANTENEDILNKNSEKNEEIYKYKLYGDIDEYAYYFMDIN IGTPGQKLSLIVDTGSSSLSFPCSECKDCGVHMENPFNLNNSSTSSILYCNDNICPYNLK CVKGRCEYLQSYCEGSRINGFYFSDIVRLESNNNTKNGNITFKKHMGCHMHEEGLFLHQH ATGVLGLSLTKPKGVPTFIDLLFKSSPKLNKIFSLCISEYGGELILGGYSKDYIVKEVSI DEKKDNIEHNKNENINSINKSIVDGILWEAITRKYYYYIRVKGFQLFGTTFSHNNKSMEM LVDSGSTFTHLPDDLYNNLNFFFDILCIHNMNNPIDIEKKLKITNETLSNHLLYFDDFKS TLKNIISSENVCVKIADNVQCWRYLENLPNIYIKLSNNTKLVWQPSSYLYKKESFWCKGL EKQVNDKPILGLSFFKNKQIIFDLKNNKIGFIESNCPSNPINTRPRTFNEYNIKENHLFK QSYFSLYAFSIIIALTFILYIILYIKKFICSYYNPLHG

  • title: catalytic residue
  • coordinates: D73,D303
No Results
No Results
IDSitePeptideScoreMethod
PBANKA_133870034 SLNKNSEKNE0.991unsp

PBANKA_133870      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India