PBANKA_1346200 | signal peptidase complex catalytic subunit SEC11, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1346200OTHER0.9888740.0110180.000108
No Results

  • Fasta :-

    >PBANKA_1346200 MDFIKEQYNSAILDLKKTFRNPRDSISHILNVICLLLNAFMIWKLLVYATGCESPIVVVL SGSMEPGYYRGDTLALYNPPIIHAGDVVVYQINGRDIPIVHRILNIHKTKNNQYHLLSKG DNNNIDDRGLYDTHQYWLENQHVLGLSVGYAPYIGMLTIWVNEYPTIKWGIVSVMLLMIL LGYE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1346200.fa Sequence name : PBANKA_1346200 Sequence length : 184 VALUES OF COMPUTED PARAMETERS Coef20 : 3.849 CoefTot : 0.000 ChDiff : -2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.729 2.106 0.277 0.731 MesoH : 0.148 0.828 -0.137 0.397 MuHd_075 : 15.357 7.176 4.861 3.117 MuHd_095 : 37.048 21.468 10.876 6.926 MuHd_100 : 35.165 18.981 10.040 6.261 MuHd_105 : 22.981 11.571 6.434 3.935 Hmax_075 : 4.400 9.700 -0.473 3.810 Hmax_095 : 9.500 12.600 1.059 5.130 Hmax_100 : 14.500 14.500 2.499 5.370 Hmax_105 : -1.663 2.625 -2.265 1.942 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9518 0.0482 DFMC : 0.9485 0.0515
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 184 PBANKA_1346200 MDFIKEQYNSAILDLKKTFRNPRDSISHILNVICLLLNAFMIWKLLVYATGCESPIVVVLSGSMEPGYYRGDTLALYNPP 80 IIHAGDVVVYQINGRDIPIVHRILNIHKTKNNQYHLLSKGDNNNIDDRGLYDTHQYWLENQHVLGLSVGYAPYIGMLTIW 160 VNEYPTIKWGIVSVMLLMILLGYE 240 ................................................................................ 80 ................................................................................ 160 ........................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1346200 5 --MDFIK|EQ 0.058 . PBANKA_1346200 16 SAILDLK|KT 0.063 . PBANKA_1346200 17 AILDLKK|TF 0.078 . PBANKA_1346200 20 DLKKTFR|NP 0.102 . PBANKA_1346200 23 KTFRNPR|DS 0.308 . PBANKA_1346200 44 NAFMIWK|LL 0.059 . PBANKA_1346200 70 MEPGYYR|GD 0.081 . PBANKA_1346200 95 VYQINGR|DI 0.100 . PBANKA_1346200 102 DIPIVHR|IL 0.075 . PBANKA_1346200 108 RILNIHK|TK 0.059 . PBANKA_1346200 110 LNIHKTK|NN 0.071 . PBANKA_1346200 119 QYHLLSK|GD 0.064 . PBANKA_1346200 128 NNNIDDR|GL 0.101 . PBANKA_1346200 168 NEYPTIK|WG 0.061 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1346200 ATGGATTTCATAAAAGAACAATATAATTCGGCAATATTAGATCTTAAAAAAACTTTTAGA AATCCAAGAGATAGCATATCCCACATATTAAATGTTATATGTTTGTTGCTAAATGCTTTT ATGATATGGAAACTATTAGTATATGCCACAGGATGTGAATCACCTATTGTTGTTGTATTA AGTGGGAGTATGGAACCCGGATATTACAGAGGGGATACTTTGGCTTTATATAATCCACCA ATTATACATGCTGGTGATGTTGTAGTATATCAAATAAATGGAAGGGATATTCCAATTGTT CATAGAATATTAAATATTCACAAAACAAAAAACAATCAATATCATTTATTATCAAAAGGA GATAATAATAATATTGATGATAGAGGTTTATATGATACACATCAATATTGGTTAGAAAAC CAACATGTTCTTGGGCTTTCAGTTGGATATGCACCATATATCGGAATGTTAACCATATGG GTTAATGAATATCCAACTATTAAATGGGGAATAGTTTCAGTGATGTTATTAATGATATTA CTTGGGTATGAATAA
  • Download Fasta

  • Fasta :-

    MDFIKEQYNSAILDLKKTFRNPRDSISHILNVICLLLNAFMIWKLLVYATGCESPIVVVL SGSMEPGYYRGDTLALYNPPIIHAGDVVVYQINGRDIPIVHRILNIHKTKNNQYHLLSKG DNNNIDDRGLYDTHQYWLENQHVLGLSVGYAPYIGMLTIWVNEYPTIKWGIVSVMLLMIL LGYE

  • title: Catalytic site
  • coordinates: S63,H101
No Results
No Results
IDSitePeptideScoreMethod
PBANKA_134620025 SNPRDSISHI0.994unsp

PBANKA_134620      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India