PBANKA_1352100 | SprT-like domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PBANKA_1352100OTHER0.9999800.0000020.000017
No Results

  • Fasta :-

    >PBANKA_1352100 MYNEINKLTSVENEYLEKSGKKRRQKNRSFYLISNENDNKYFTQIVDNSIFSNERDNAVK NSNQNNIESDYKKDVQEHDEDLSTLEVIRQLSSIKIDSSTDSSNAKDSYARNRIREKKKE KKNEKKKKIIIHHIPSIECVEDIVVYDESKDTEFPDLYELFSEYNVKYFYNRLESVQVKW SNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYKETLLHEMIHAFLFLNQKKTDKND GHGPEFKKHMYRINKLTGLNISIYHSFHDEVHFYRNHVWRCTGICRKYPPHFGYIKRSMN RPPGPKEKWWRSHSTYCSGKFVKIKELEPSKNVEGNGNKHPPDLNTTLEEEIELPKKTNG KKIDDNRTNGAMEIEDVMDDFMFNDTIIITDSNKKKSKKKTDTCNNELDIINIIKTLFNN NKESNIHNFSTSDNAIDYHKAFKSKNYFEID
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1352100.fa Sequence name : PBANKA_1352100 Sequence length : 451 VALUES OF COMPUTED PARAMETERS Coef20 : 3.103 CoefTot : -0.291 ChDiff : 12 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.071 1.341 0.149 0.515 MesoH : -1.320 0.088 -0.549 0.093 MuHd_075 : 34.602 18.447 10.318 5.738 MuHd_095 : 28.251 21.738 8.691 6.554 MuHd_100 : 34.125 23.422 10.282 7.341 MuHd_105 : 29.357 19.361 8.914 6.259 Hmax_075 : 4.900 5.833 -0.776 2.847 Hmax_095 : -3.100 6.300 -2.614 3.020 Hmax_100 : 4.400 8.500 -0.558 3.710 Hmax_105 : 0.900 5.300 -1.080 3.330 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8881 0.1119 DFMC : 0.9730 0.0270
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 451 PBANKA_1352100 MYNEINKLTSVENEYLEKSGKKRRQKNRSFYLISNENDNKYFTQIVDNSIFSNERDNAVKNSNQNNIESDYKKDVQEHDE 80 DLSTLEVIRQLSSIKIDSSTDSSNAKDSYARNRIREKKKEKKNEKKKKIIIHHIPSIECVEDIVVYDESKDTEFPDLYEL 160 FSEYNVKYFYNRLESVQVKWSNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYKETLLHEMIHAFLFLNQKKTDKND 240 GHGPEFKKHMYRINKLTGLNISIYHSFHDEVHFYRNHVWRCTGICRKYPPHFGYIKRSMNRPPGPKEKWWRSHSTYCSGK 320 FVKIKELEPSKNVEGNGNKHPPDLNTTLEEEIELPKKTNGKKIDDNRTNGAMEIEDVMDDFMFNDTIIITDSNKKKSKKK 400 TDTCNNELDIINIIKTLFNNNKESNIHNFSTSDNAIDYHKAFKSKNYFEID 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1352100 7 MYNEINK|LT 0.068 . PBANKA_1352100 18 ENEYLEK|SG 0.065 . PBANKA_1352100 21 YLEKSGK|KR 0.066 . PBANKA_1352100 22 LEKSGKK|RR 0.077 . PBANKA_1352100 23 EKSGKKR|RQ 0.163 . PBANKA_1352100 24 KSGKKRR|QK 0.230 . PBANKA_1352100 26 GKKRRQK|NR 0.153 . PBANKA_1352100 28 KRRQKNR|SF 0.183 . PBANKA_1352100 40 SNENDNK|YF 0.075 . PBANKA_1352100 55 SIFSNER|DN 0.085 . PBANKA_1352100 60 ERDNAVK|NS 0.063 . PBANKA_1352100 72 NIESDYK|KD 0.057 . PBANKA_1352100 73 IESDYKK|DV 0.239 . PBANKA_1352100 89 STLEVIR|QL 0.090 . PBANKA_1352100 95 RQLSSIK|ID 0.060 . PBANKA_1352100 106 TDSSNAK|DS 0.090 . PBANKA_1352100 111 AKDSYAR|NR 0.075 . PBANKA_1352100 113 DSYARNR|IR 0.098 . PBANKA_1352100 115 YARNRIR|EK 0.095 . PBANKA_1352100 117 RNRIREK|KK 0.069 . PBANKA_1352100 118 NRIREKK|KE 0.372 . PBANKA_1352100 119 RIREKKK|EK 0.115 . PBANKA_1352100 121 REKKKEK|KN 0.075 . PBANKA_1352100 122 EKKKEKK|NE 0.094 . PBANKA_1352100 125 KEKKNEK|KK 0.070 . PBANKA_1352100 126 EKKNEKK|KK 0.113 . PBANKA_1352100 127 KKNEKKK|KI 0.128 . PBANKA_1352100 128 KNEKKKK|II 0.235 . PBANKA_1352100 150 VVYDESK|DT 0.063 . PBANKA_1352100 167 FSEYNVK|YF 0.069 . PBANKA_1352100 172 VKYFYNR|LE 0.100 . PBANKA_1352100 179 LESVQVK|WS 0.075 . PBANKA_1352100 183 QVKWSNK|MK 0.061 . PBANKA_1352100 185 KWSNKMK|LC 0.075 . PBANKA_1352100 194 AGICIFK|KS 0.058 . PBANKA_1352100 195 GICIFKK|SG 0.129 . PBANKA_1352100 202 SGYCCIR|LS 0.078 . PBANKA_1352100 209 LSLPLLK|LR 0.058 . PBANKA_1352100 211 LPLLKLR|KI 0.091 . PBANKA_1352100 212 PLLKLRK|IK 0.081 . PBANKA_1352100 214 LKLRKIK|EY 0.147 . PBANKA_1352100 217 RKIKEYK|ET 0.069 . PBANKA_1352100 234 FLFLNQK|KT 0.062 . PBANKA_1352100 235 LFLNQKK|TD 0.089 . PBANKA_1352100 238 NQKKTDK|ND 0.071 . PBANKA_1352100 247 GHGPEFK|KH 0.060 . PBANKA_1352100 248 HGPEFKK|HM 0.092 . PBANKA_1352100 252 FKKHMYR|IN 0.085 . PBANKA_1352100 255 HMYRINK|LT 0.131 . PBANKA_1352100 275 DEVHFYR|NH 0.073 . PBANKA_1352100 280 YRNHVWR|CT 0.244 . PBANKA_1352100 286 RCTGICR|KY 0.077 . PBANKA_1352100 287 CTGICRK|YP 0.071 . PBANKA_1352100 296 PHFGYIK|RS 0.057 . PBANKA_1352100 297 HFGYIKR|SM 0.229 . PBANKA_1352100 301 IKRSMNR|PP 0.137 . PBANKA_1352100 306 NRPPGPK|EK 0.059 . PBANKA_1352100 308 PPGPKEK|WW 0.072 . PBANKA_1352100 311 PKEKWWR|SH 0.179 . PBANKA_1352100 320 STYCSGK|FV 0.103 . PBANKA_1352100 323 CSGKFVK|IK 0.065 . PBANKA_1352100 325 GKFVKIK|EL 0.090 . PBANKA_1352100 331 KELEPSK|NV 0.071 . PBANKA_1352100 339 VEGNGNK|HP 0.058 . PBANKA_1352100 356 EEIELPK|KT 0.058 . PBANKA_1352100 357 EIELPKK|TN 0.115 . PBANKA_1352100 361 PKKTNGK|KI 0.078 . PBANKA_1352100 362 KKTNGKK|ID 0.089 . PBANKA_1352100 367 KKIDDNR|TN 0.116 . PBANKA_1352100 394 IITDSNK|KK 0.063 . PBANKA_1352100 395 ITDSNKK|KS 0.086 . PBANKA_1352100 396 TDSNKKK|SK 0.265 . PBANKA_1352100 398 SNKKKSK|KK 0.075 . PBANKA_1352100 399 NKKKSKK|KT 0.155 . PBANKA_1352100 400 KKKSKKK|TD 0.099 . PBANKA_1352100 415 DIINIIK|TL 0.062 . PBANKA_1352100 422 TLFNNNK|ES 0.068 . PBANKA_1352100 440 NAIDYHK|AF 0.059 . PBANKA_1352100 443 DYHKAFK|SK 0.082 . PBANKA_1352100 445 HKAFKSK|NY 0.081 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1352100 ATGTATAATGAGATAAACAAATTAACGTCTGTAGAAAATGAATATTTGGAAAAAAGTGGG AAAAAAAGAAGACAGAAAAATAGATCATTTTATTTAATTTCGAATGAAAATGACAACAAA TATTTCACACAAATTGTAGACAATTCCATATTTTCAAACGAACGTGACAATGCTGTAAAA AATTCGAATCAAAATAATATAGAAAGTGATTATAAAAAAGATGTACAAGAACATGACGAG GACTTGTCTACTCTTGAAGTTATACGCCAACTAAGTTCAATAAAAATTGATTCCAGCACA GATTCGTCAAATGCAAAAGATTCTTATGCTAGGAACCGAATCAGAGAAAAAAAGAAAGAA AAAAAAAACGAAAAAAAGAAAAAAATTATTATTCATCACATTCCAAGTATAGAATGTGTA GAAGATATCGTGGTTTATGACGAATCGAAAGATACAGAATTTCCAGATTTATATGAACTT TTTTCAGAATATAACGTGAAATATTTTTACAATAGATTAGAAAGTGTACAAGTAAAATGG AGTAATAAAATGAAGTTATGTGCTGGGATATGTATATTTAAAAAATCTGGATATTGTTGT ATTAGACTATCACTCCCTTTACTAAAATTGCGAAAAATAAAAGAATACAAAGAAACATTA CTACATGAAATGATTCACGCCTTTTTATTTTTAAATCAAAAAAAAACTGATAAAAACGAT GGACATGGTCCTGAATTCAAAAAACATATGTATAGAATAAATAAATTGACGGGTTTAAAT ATAAGCATCTATCACAGTTTTCATGATGAAGTTCATTTTTACCGAAACCATGTTTGGCGT TGTACAGGGATTTGCAGAAAATATCCTCCACATTTTGGATACATAAAACGATCCATGAAT CGCCCACCGGGACCAAAGGAAAAGTGGTGGAGAAGTCACTCAACTTATTGTTCAGGAAAA TTTGTAAAAATCAAAGAATTAGAACCTTCTAAAAATGTAGAAGGAAATGGAAATAAACAC CCCCCCGATCTTAATACAACATTAGAGGAAGAAATTGAACTCCCCAAAAAAACAAACGGA AAAAAAATAGATGACAATAGAACCAACGGGGCCATGGAAATTGAAGATGTAATGGATGAT TTCATGTTTAATGATACAATAATAATAACGGATTCAAATAAAAAAAAATCGAAAAAAAAA ACAGATACATGTAATAATGAGTTAGATATAATTAATATCATTAAAACTTTGTTTAACAAT AATAAGGAAAGTAATATTCATAACTTTTCAACTTCAGATAATGCAATAGATTATCATAAA GCATTTAAAAGTAAAAACTATTTCGAAATAGATTAG
  • Download Fasta

  • Fasta :-

    MYNEINKLTSVENEYLEKSGKKRRQKNRSFYLISNENDNKYFTQIVDNSIFSNERDNAVK NSNQNNIESDYKKDVQEHDEDLSTLEVIRQLSSIKIDSSTDSSNAKDSYARNRIREKKKE KKNEKKKKIIIHHIPSIECVEDIVVYDESKDTEFPDLYELFSEYNVKYFYNRLESVQVKW SNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYKETLLHEMIHAFLFLNQKKTDKND GHGPEFKKHMYRINKLTGLNISIYHSFHDEVHFYRNHVWRCTGICRKYPPHFGYIKRSMN RPPGPKEKWWRSHSTYCSGKFVKIKELEPSKNVEGNGNKHPPDLNTTLEEEIELPKKTNG KKIDDNRTNGAMEIEDVMDDFMFNDTIIITDSNKKKSKKKTDTCNNELDIINIIKTLFNN NKESNIHNFSTSDNAIDYHKAFKSKNYFEID

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1352100266 SSIYHSFHDE0.995unspPBANKA_1352100266 SSIYHSFHDE0.995unspPBANKA_1352100266 SSIYHSFHDE0.995unspPBANKA_1352100397 SNKKKSKKKT0.998unspPBANKA_135210010 SNKLTSVENE0.996unspPBANKA_135210098 SIKIDSSTDS0.994unsp

PBANKA_135210      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India