PBANKA_1425350 | GTP-binding protein YihA3, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1425350SP0.4513280.5251580.023514CS pos: 27-28. TWC-FI. Pr: 0.5339
No Results

  • Fasta :-

    >PBANKA_1425350 MLNSKTSRIYCTIFILFLCINTVLTWCFIHIKSQTKSLDYPRTRIYENINKKEDLEYKAF KNISFNKLKTSLKNFLVLKKKINISNVKYVSFLGKYYNYEKIDNYGVNEICILGRSNVGK STFLRNFIKYLINVNDNKNIKVSKRSGCTRSINLYSFENAKKKKLFILTDMPGLGYAEGI GEKKMEYLKKNLDDYVYLRNQICLFFILIDMSVDIQKIDISLMDAIRKTSIPLRVICTKC DKFNGNVNHRLNGIKTFYKLEKTPIHISKFSNNNYINIFKEIQYHCNLDNS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1425350.fa Sequence name : PBANKA_1425350 Sequence length : 291 VALUES OF COMPUTED PARAMETERS Coef20 : 4.939 CoefTot : 0.035 ChDiff : 25 ZoneTo : 38 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.235 2.424 0.510 0.830 MesoH : -1.260 0.269 -0.498 0.154 MuHd_075 : 18.277 22.113 8.289 5.541 MuHd_095 : 18.334 18.715 8.267 5.463 MuHd_100 : 17.839 17.123 7.529 5.756 MuHd_105 : 23.032 16.154 5.383 6.363 Hmax_075 : 17.267 25.400 6.196 7.590 Hmax_095 : 17.937 21.088 6.337 6.659 Hmax_100 : 11.800 15.300 3.195 8.700 Hmax_105 : 17.850 28.000 0.996 7.860 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7489 0.2511 DFMC : 0.8259 0.1741
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 291 PBANKA_1425350 MLNSKTSRIYCTIFILFLCINTVLTWCFIHIKSQTKSLDYPRTRIYENINKKEDLEYKAFKNISFNKLKTSLKNFLVLKK 80 KINISNVKYVSFLGKYYNYEKIDNYGVNEICILGRSNVGKSTFLRNFIKYLINVNDNKNIKVSKRSGCTRSINLYSFENA 160 KKKKLFILTDMPGLGYAEGIGEKKMEYLKKNLDDYVYLRNQICLFFILIDMSVDIQKIDISLMDAIRKTSIPLRVICTKC 240 DKFNGNVNHRLNGIKTFYKLEKTPIHISKFSNNNYINIFKEIQYHCNLDNS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1425350 5 --MLNSK|TS 0.057 . PBANKA_1425350 8 LNSKTSR|IY 0.142 . PBANKA_1425350 32 WCFIHIK|SQ 0.086 . PBANKA_1425350 36 HIKSQTK|SL 0.082 . PBANKA_1425350 42 KSLDYPR|TR 0.071 . PBANKA_1425350 44 LDYPRTR|IY 0.101 . PBANKA_1425350 51 IYENINK|KE 0.056 . PBANKA_1425350 52 YENINKK|ED 0.078 . PBANKA_1425350 58 KEDLEYK|AF 0.059 . PBANKA_1425350 61 LEYKAFK|NI 0.067 . PBANKA_1425350 67 KNISFNK|LK 0.060 . PBANKA_1425350 69 ISFNKLK|TS 0.065 . PBANKA_1425350 73 KLKTSLK|NF 0.055 . PBANKA_1425350 79 KNFLVLK|KK 0.059 . PBANKA_1425350 80 NFLVLKK|KI 0.083 . PBANKA_1425350 81 FLVLKKK|IN 0.094 . PBANKA_1425350 88 INISNVK|YV 0.083 . PBANKA_1425350 95 YVSFLGK|YY 0.072 . PBANKA_1425350 101 KYYNYEK|ID 0.060 . PBANKA_1425350 115 EICILGR|SN 0.104 . PBANKA_1425350 120 GRSNVGK|ST 0.132 . PBANKA_1425350 125 GKSTFLR|NF 0.128 . PBANKA_1425350 129 FLRNFIK|YL 0.078 . PBANKA_1425350 138 INVNDNK|NI 0.065 . PBANKA_1425350 141 NDNKNIK|VS 0.064 . PBANKA_1425350 144 KNIKVSK|RS 0.068 . PBANKA_1425350 145 NIKVSKR|SG 0.271 . PBANKA_1425350 150 KRSGCTR|SI 0.173 . PBANKA_1425350 161 YSFENAK|KK 0.057 . PBANKA_1425350 162 SFENAKK|KK 0.095 . PBANKA_1425350 163 FENAKKK|KL 0.133 . PBANKA_1425350 164 ENAKKKK|LF 0.098 . PBANKA_1425350 183 AEGIGEK|KM 0.056 . PBANKA_1425350 184 EGIGEKK|ME 0.072 . PBANKA_1425350 189 KKMEYLK|KN 0.056 . PBANKA_1425350 190 KMEYLKK|NL 0.132 . PBANKA_1425350 199 DDYVYLR|NQ 0.074 . PBANKA_1425350 217 MSVDIQK|ID 0.062 . PBANKA_1425350 227 SLMDAIR|KT 0.094 . PBANKA_1425350 228 LMDAIRK|TS 0.072 . PBANKA_1425350 234 KTSIPLR|VI 0.116 . PBANKA_1425350 239 LRVICTK|CD 0.065 . PBANKA_1425350 242 ICTKCDK|FN 0.070 . PBANKA_1425350 250 NGNVNHR|LN 0.104 . PBANKA_1425350 255 HRLNGIK|TF 0.073 . PBANKA_1425350 259 GIKTFYK|LE 0.060 . PBANKA_1425350 262 TFYKLEK|TP 0.065 . PBANKA_1425350 269 TPIHISK|FS 0.080 . PBANKA_1425350 280 NYINIFK|EI 0.058 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1425350 ATGCTAAATTCCAAAACTAGTAGAATTTATTGTACCATTTTTATTTTGTTTTTATGTATT AACACCGTTCTCACATGGTGTTTTATACATATCAAGTCTCAAACCAAATCTTTGGATTAT CCCAGAACAAGAATATATGAAAATATAAATAAAAAAGAAGACCTAGAATACAAAGCCTTT AAAAACATCAGCTTTAATAAACTTAAAACAAGTTTAAAAAACTTTCTCGTTTTAAAGAAA AAAATTAACATATCCAATGTTAAGTATGTTTCTTTTCTAGGTAAATATTACAATTACGAA AAAATCGATAACTATGGAGTTAATGAAATATGCATATTAGGAAGGAGTAATGTTGGAAAA TCAACATTTTTAAGAAATTTCATAAAGTATCTTATAAACGTAAATGATAATAAAAATATT AAAGTGTCAAAACGTAGTGGGTGCACAAGGTCAATAAATTTATATTCCTTTGAAAATGCA AAAAAAAAAAAATTATTTATTCTAACGGATATGCCAGGTTTAGGTTATGCTGAAGGAATT GGGGAGAAAAAAATGGAGTATTTGAAAAAAAACTTAGATGATTATGTATACTTAAGAAAT CAAATTTGTTTATTTTTTATATTAATTGATATGAGTGTCGATATACAAAAAATAGATATT TCCTTGATGGATGCCATTCGAAAAACGAGCATCCCACTTCGTGTAATTTGTACCAAATGC GACAAATTTAATGGGAATGTTAACCATCGGCTTAACGGGATAAAAACTTTTTATAAACTT GAAAAAACTCCCATACATATATCAAAATTTTCCAATAACAACTATATAAACATATTTAAA GAAATTCAGTATCATTGCAATTTGGATAATTCATAA
  • Download Fasta

  • Fasta :-

    MLNSKTSRIYCTIFILFLCINTVLTWCFIHIKSQTKSLDYPRTRIYENINKKEDLEYKAF KNISFNKLKTSLKNFLVLKKKINISNVKYVSFLGKYYNYEKIDNYGVNEICILGRSNVGK STFLRNFIKYLINVNDNKNIKVSKRSGCTRSINLYSFENAKKKKLFILTDMPGLGYAEGI GEKKMEYLKKNLDDYVYLRNQICLFFILIDMSVDIQKIDISLMDAIRKTSIPLRVICTKC DKFNGNVNHRLNGIKTFYKLEKTPIHISKFSNNNYINIFKEIQYHCNLDNS

  • title: GTP/Mg2+ binding site
  • coordinates: S116,N117,V118,G119,K120,S121,T122,G173,T238,K239,D241,S271,N272,N273
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PBANKA_142535      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India