PBANKA_1449000 | microgamete surface protein MiGS, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0009986      GO:0044310      

  • Curated_GO_Components:  cell surface      osmiophilic body      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1449000SP0.0289020.9710130.000085CS pos: 23-24. TNC-YL. Pr: 0.9518
No Results

  • Fasta :-

    >PBANKA_1449000 MSQRYLVIIHCVFLLLNLFKTNCYLVQFHGNSKTNHYQCVGCINEKNETLRSIDNKNNIL NSSFLHVQEDDNNEFYSLKLNEKNFRWSIPLALGSEKSIIDLVLTISNSSTAFYCHDENK PSLETEVLGYDLSKSTDLKYVDCTNEECTEILGSNKCLILDEYFKLLKGYALRKKSCKSK FCDYVNKMNFLNMSNPGVDKNASVCPFDKKVDNDKIKGFYFNDSFLISKEKKITYNYFGC ITENENLNINENTSGIIGLANDYKADKKYSSILNAFISNSGSKKNIFGLCLIDGGGFISF GGYDKAALEPALPAKEIKGSEEYEDLDTSYRNPLLSIGDDSDNLIWTNYSESTNELYKVK VTKINLNVTDDNSEYDVNKDFILDTYDYFISLPREISTKLTEKINKICKDLNDKCKNVEN SGTFQMGNEQVGSFPAIEFFFNDNKVVVPPHDYIINDGDNNYKILVKHTENSEKLGIPFF LSKYIIFDNEQKKLGISQSKCQTNNAFSPQDHVDKVQEVVKEPSEVVASLDGDKEPDVVV VPYDEYKGFYEKNKTAILAVSGVAVSGSIIGSIFYLL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1449000.fa Sequence name : PBANKA_1449000 Sequence length : 577 VALUES OF COMPUTED PARAMETERS Coef20 : 4.545 CoefTot : -1.958 ChDiff : -18 ZoneTo : 44 KR : 3 DE : 0 CleavSite : 14 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.894 1.976 0.424 0.711 MesoH : -0.841 0.082 -0.440 0.182 MuHd_075 : 15.228 12.603 4.655 4.321 MuHd_095 : 15.367 19.019 8.009 3.954 MuHd_100 : 20.072 21.820 8.794 5.006 MuHd_105 : 26.962 23.388 10.052 6.829 Hmax_075 : 16.683 16.800 4.107 7.690 Hmax_095 : 11.287 24.762 6.736 4.891 Hmax_100 : 12.400 18.400 4.116 4.490 Hmax_105 : 18.000 23.683 4.785 7.560 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9166 0.0834 DFMC : 0.9240 0.0760
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 577 PBANKA_1449000 MSQRYLVIIHCVFLLLNLFKTNCYLVQFHGNSKTNHYQCVGCINEKNETLRSIDNKNNILNSSFLHVQEDDNNEFYSLKL 80 NEKNFRWSIPLALGSEKSIIDLVLTISNSSTAFYCHDENKPSLETEVLGYDLSKSTDLKYVDCTNEECTEILGSNKCLIL 160 DEYFKLLKGYALRKKSCKSKFCDYVNKMNFLNMSNPGVDKNASVCPFDKKVDNDKIKGFYFNDSFLISKEKKITYNYFGC 240 ITENENLNINENTSGIIGLANDYKADKKYSSILNAFISNSGSKKNIFGLCLIDGGGFISFGGYDKAALEPALPAKEIKGS 320 EEYEDLDTSYRNPLLSIGDDSDNLIWTNYSESTNELYKVKVTKINLNVTDDNSEYDVNKDFILDTYDYFISLPREISTKL 400 TEKINKICKDLNDKCKNVENSGTFQMGNEQVGSFPAIEFFFNDNKVVVPPHDYIINDGDNNYKILVKHTENSEKLGIPFF 480 LSKYIIFDNEQKKLGISQSKCQTNNAFSPQDHVDKVQEVVKEPSEVVASLDGDKEPDVVVVPYDEYKGFYEKNKTAILAV 560 SGVAVSGSIIGSIFYLL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1449000 4 ---MSQR|YL 0.104 . PBANKA_1449000 20 LLLNLFK|TN 0.060 . PBANKA_1449000 33 QFHGNSK|TN 0.061 . PBANKA_1449000 46 VGCINEK|NE 0.051 . PBANKA_1449000 51 EKNETLR|SI 0.196 . PBANKA_1449000 56 LRSIDNK|NN 0.069 . PBANKA_1449000 79 NEFYSLK|LN 0.068 . PBANKA_1449000 83 SLKLNEK|NF 0.063 . PBANKA_1449000 86 LNEKNFR|WS 0.089 . PBANKA_1449000 97 LALGSEK|SI 0.087 . PBANKA_1449000 120 YCHDENK|PS 0.063 . PBANKA_1449000 134 LGYDLSK|ST 0.083 . PBANKA_1449000 139 SKSTDLK|YV 0.095 . PBANKA_1449000 156 EILGSNK|CL 0.058 . PBANKA_1449000 165 ILDEYFK|LL 0.054 . PBANKA_1449000 168 EYFKLLK|GY 0.054 . PBANKA_1449000 173 LKGYALR|KK 0.080 . PBANKA_1449000 174 KGYALRK|KS 0.080 . PBANKA_1449000 175 GYALRKK|SC 0.146 . PBANKA_1449000 178 LRKKSCK|SK 0.094 . PBANKA_1449000 180 KKSCKSK|FC 0.110 . PBANKA_1449000 187 FCDYVNK|MN 0.062 . PBANKA_1449000 200 SNPGVDK|NA 0.075 . PBANKA_1449000 209 SVCPFDK|KV 0.071 . PBANKA_1449000 210 VCPFDKK|VD 0.094 . PBANKA_1449000 215 KKVDNDK|IK 0.071 . PBANKA_1449000 217 VDNDKIK|GF 0.071 . PBANKA_1449000 229 DSFLISK|EK 0.056 . PBANKA_1449000 231 FLISKEK|KI 0.063 . PBANKA_1449000 232 LISKEKK|IT 0.148 . PBANKA_1449000 264 GLANDYK|AD 0.063 . PBANKA_1449000 267 NDYKADK|KY 0.072 . PBANKA_1449000 268 DYKADKK|YS 0.095 . PBANKA_1449000 283 ISNSGSK|KN 0.068 . PBANKA_1449000 284 SNSGSKK|NI 0.134 . PBANKA_1449000 305 SFGGYDK|AA 0.055 . PBANKA_1449000 315 EPALPAK|EI 0.091 . PBANKA_1449000 318 LPAKEIK|GS 0.098 . PBANKA_1449000 331 DLDTSYR|NP 0.064 . PBANKA_1449000 358 STNELYK|VK 0.061 . PBANKA_1449000 360 NELYKVK|VT 0.064 . PBANKA_1449000 363 YKVKVTK|IN 0.070 . PBANKA_1449000 379 SEYDVNK|DF 0.067 . PBANKA_1449000 394 YFISLPR|EI 0.106 . PBANKA_1449000 399 PREISTK|LT 0.079 . PBANKA_1449000 403 STKLTEK|IN 0.059 . PBANKA_1449000 406 LTEKINK|IC 0.059 . PBANKA_1449000 409 KINKICK|DL 0.082 . PBANKA_1449000 414 CKDLNDK|CK 0.058 . PBANKA_1449000 416 DLNDKCK|NV 0.111 . PBANKA_1449000 445 FFFNDNK|VV 0.058 . PBANKA_1449000 463 DGDNNYK|IL 0.059 . PBANKA_1449000 467 NYKILVK|HT 0.071 . PBANKA_1449000 474 HTENSEK|LG 0.061 . PBANKA_1449000 483 IPFFLSK|YI 0.070 . PBANKA_1449000 492 IFDNEQK|KL 0.065 . PBANKA_1449000 493 FDNEQKK|LG 0.090 . PBANKA_1449000 500 LGISQSK|CQ 0.061 . PBANKA_1449000 515 PQDHVDK|VQ 0.063 . PBANKA_1449000 521 KVQEVVK|EP 0.070 . PBANKA_1449000 534 ASLDGDK|EP 0.056 . PBANKA_1449000 547 VPYDEYK|GF 0.074 . PBANKA_1449000 552 YKGFYEK|NK 0.065 . PBANKA_1449000 554 GFYEKNK|TA 0.077 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1449000 ATGTCTCAAAGATATTTAGTAATTATCCATTGCGTTTTCCTTCTTTTGAATTTATTCAAA ACAAATTGCTATTTAGTACAATTTCACGGCAATTCGAAAACGAATCATTATCAATGTGTT GGTTGTATAAATGAAAAAAATGAAACGCTAAGAAGTATCGATAATAAAAATAATATATTA AATAGTTCTTTTCTACATGTACAAGAAGATGATAATAATGAATTTTATAGCCTCAAATTA AATGAAAAAAACTTTAGATGGAGTATACCTTTAGCATTAGGCTCAGAAAAATCAATTATC GATTTAGTTTTAACAATTTCAAATTCATCTACTGCATTTTATTGCCATGATGAAAATAAG CCATCTTTAGAAACTGAAGTATTAGGATATGATTTATCAAAATCTACAGATTTAAAATAT GTTGATTGTACAAATGAAGAATGTACTGAAATTCTAGGAAGTAATAAATGTTTAATTTTA GATGAATATTTTAAATTATTAAAAGGATATGCTTTGAGAAAAAAAAGTTGTAAAAGTAAA TTTTGTGATTATGTAAATAAAATGAACTTTTTAAATATGAGCAATCCTGGGGTAGATAAA AATGCATCTGTATGTCCATTTGATAAGAAAGTTGATAATGATAAAATTAAAGGGTTCTAT TTTAATGATTCATTTTTAATTAGTAAAGAAAAAAAAATTACATATAATTATTTTGGATGT ATAACAGAAAATGAAAATTTAAATATTAATGAAAATACATCTGGTATTATTGGATTAGCT AATGATTATAAAGCTGATAAGAAATATTCATCCATTTTAAATGCTTTTATTTCAAATTCG GGATCAAAAAAAAATATATTTGGTTTATGCTTAATTGATGGGGGTGGATTTATTTCATTT GGTGGATATGATAAAGCAGCATTAGAACCCGCTTTACCTGCAAAAGAAATAAAAGGTTCT GAAGAATATGAAGATTTAGACACATCATATAGAAATCCATTATTATCCATTGGTGATGAT TCAGATAATTTAATTTGGACAAATTATTCTGAATCTACAAATGAATTATACAAAGTAAAA GTAACCAAAATTAATTTAAACGTAACTGATGATAATTCAGAATATGATGTTAATAAAGAT TTTATTCTCGATACATATGATTATTTTATATCGCTACCCCGAGAAATATCAACTAAACTT ACAGAAAAAATTAATAAAATATGTAAAGACTTAAATGATAAATGTAAAAATGTTGAAAAT TCTGGGACATTCCAAATGGGGAATGAGCAAGTAGGATCTTTCCCAGCCATAGAATTCTTT TTCAATGATAACAAAGTGGTAGTTCCCCCACACGATTATATAATAAACGACGGAGATAAC AATTACAAAATTTTAGTAAAACATACTGAAAACAGTGAAAAACTTGGAATTCCATTTTTC TTAAGCAAATATATAATATTTGACAACGAACAAAAGAAATTAGGTATTTCCCAATCTAAA TGCCAAACTAACAACGCATTTTCACCACAAGATCATGTTGATAAAGTCCAAGAGGTAGTT AAAGAACCAAGTGAAGTTGTCGCATCTCTCGATGGAGATAAAGAACCAGATGTAGTAGTA GTACCATATGATGAATATAAAGGTTTTTATGAAAAAAATAAAACAGCCATTTTAGCAGTT TCTGGTGTTGCTGTTTCAGGATCTATTATTGGAAGTATTTTTTACCTTTTATAA
  • Download Fasta

  • Fasta :-

    MSQRYLVIIHCVFLLLNLFKTNCYLVQFHGNSKTNHYQCVGCINEKNETLRSIDNKNNIL NSSFLHVQEDDNNEFYSLKLNEKNFRWSIPLALGSEKSIIDLVLTISNSSTAFYCHDENK PSLETEVLGYDLSKSTDLKYVDCTNEECTEILGSNKCLILDEYFKLLKGYALRKKSCKSK FCDYVNKMNFLNMSNPGVDKNASVCPFDKKVDNDKIKGFYFNDSFLISKEKKITYNYFGC ITENENLNINENTSGIIGLANDYKADKKYSSILNAFISNSGSKKNIFGLCLIDGGGFISF GGYDKAALEPALPAKEIKGSEEYEDLDTSYRNPLLSIGDDSDNLIWTNYSESTNELYKVK VTKINLNVTDDNSEYDVNKDFILDTYDYFISLPREISTKLTEKINKICKDLNDKCKNVEN SGTFQMGNEQVGSFPAIEFFFNDNKVVVPPHDYIINDGDNNYKILVKHTENSEKLGIPFF LSKYIIFDNEQKKLGISQSKCQTNNAFSPQDHVDKVQEVVKEPSEVVASLDGDKEPDVVV VPYDEYKGFYEKNKTAILAVSGVAVSGSIIGSIFYLL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1449000508 SNNAFSPQDH0.997unspPBANKA_1449000508 SNNAFSPQDH0.997unspPBANKA_1449000508 SNNAFSPQDH0.997unspPBANKA_1449000176 SLRKKSCKSK0.994unspPBANKA_1449000336 SNPLLSIGDD0.995unsp

PBANKA_144900      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India