PBANKA_1461800 | 26S protease regulatory subunit 8, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1461800OTHER0.9998490.0000410.000110
No Results

  • Fasta :-

    >PBANKA_1461800 MAAVDMQMRSSDLGEGKKNENDKIHGNKNDEEMQSGIKTYYEMKIEEYESIINKKLQNKK RLEAQRNELNTRVRELRDEIQYLLEAASYVGEIAKPMGKNKVLVKINPEGKYVVDIASHI DITKCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKE VIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFE STQNIKVIMCTNRIDILDDALLRPGRIDRKIEFPNPNVEARIEILKIHSRKMNLMRGIDM VKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKQDAEKNFTLRKL WK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1461800.fa Sequence name : PBANKA_1461800 Sequence length : 422 VALUES OF COMPUTED PARAMETERS Coef20 : 3.386 CoefTot : 0.282 ChDiff : -2 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.335 0.788 -0.063 0.398 MesoH : -0.765 0.175 -0.411 0.158 MuHd_075 : 10.899 3.327 1.851 1.396 MuHd_095 : 9.301 2.164 1.360 1.345 MuHd_100 : 11.940 2.927 2.100 0.466 MuHd_105 : 21.430 7.481 5.118 2.208 Hmax_075 : -9.700 2.900 -3.838 -0.060 Hmax_095 : -3.587 0.263 -3.691 1.040 Hmax_100 : 2.200 4.200 -1.662 1.780 Hmax_105 : 0.700 5.133 -1.415 1.353 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9629 0.0371 DFMC : 0.9275 0.0725
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 422 PBANKA_1461800 MAAVDMQMRSSDLGEGKKNENDKIHGNKNDEEMQSGIKTYYEMKIEEYESIINKKLQNKKRLEAQRNELNTRVRELRDEI 80 QYLLEAASYVGEIAKPMGKNKVLVKINPEGKYVVDIASHIDITKCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKV 160 PDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY 240 IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDDA 320 LLRPGRIDRKIEFPNPNVEARIEILKIHSRKMNLMRGIDMVKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFE 400 MAVAKVMKQDAEKNFTLRKLWK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1461800 9 AVDMQMR|SS 0.153 . PBANKA_1461800 17 SDLGEGK|KN 0.065 . PBANKA_1461800 18 DLGEGKK|NE 0.089 . PBANKA_1461800 23 KKNENDK|IH 0.086 . PBANKA_1461800 28 DKIHGNK|ND 0.072 . PBANKA_1461800 38 EMQSGIK|TY 0.054 . PBANKA_1461800 44 KTYYEMK|IE 0.059 . PBANKA_1461800 54 YESIINK|KL 0.064 . PBANKA_1461800 55 ESIINKK|LQ 0.096 . PBANKA_1461800 59 NKKLQNK|KR 0.061 . PBANKA_1461800 60 KKLQNKK|RL 0.114 . PBANKA_1461800 61 KLQNKKR|LE 0.171 . PBANKA_1461800 66 KRLEAQR|NE 0.074 . PBANKA_1461800 72 RNELNTR|VR 0.071 . PBANKA_1461800 74 ELNTRVR|EL 0.111 . PBANKA_1461800 77 TRVRELR|DE 0.409 . PBANKA_1461800 95 YVGEIAK|PM 0.070 . PBANKA_1461800 99 IAKPMGK|NK 0.054 . PBANKA_1461800 101 KPMGKNK|VL 0.077 . PBANKA_1461800 105 KNKVLVK|IN 0.064 . PBANKA_1461800 111 KINPEGK|YV 0.096 . PBANKA_1461800 124 SHIDITK|CT 0.061 . PBANKA_1461800 130 KCTPNTR|VA 0.070 . PBANKA_1461800 139 LYNDSYK|LH 0.058 . PBANKA_1461800 142 DSYKLHK|IL 0.062 . PBANKA_1461800 147 HKILPSK|VD 0.057 . PBANKA_1461800 156 PLVSLMK|VE 0.054 . PBANKA_1461800 159 SLMKVEK|VP 0.064 . PBANKA_1461800 176 GLDQQVK|EV 0.083 . PBANKA_1461800 179 QQVKEVK|EV 0.072 . PBANKA_1461800 187 VIELPVK|HP 0.060 . PBANKA_1461800 201 LGISQPK|GV 0.082 . PBANKA_1461800 213 GPPGTGK|TL 0.059 . PBANKA_1461800 218 GKTLLAR|AV 0.134 . PBANKA_1461800 230 TDCTFIR|VS 0.131 . PBANKA_1461800 239 GSELVQK|YI 0.105 . PBANKA_1461800 246 YIGEGSR|MV 0.115 . PBANKA_1461800 249 EGSRMVR|EL 0.260 . PBANKA_1461800 256 ELFVMAR|EH 0.090 . PBANKA_1461800 275 DSIGSQR|IE 0.114 . PBANKA_1461800 287 GDSEVQR|TM 0.152 . PBANKA_1461800 306 ESTQNIK|VI 0.055 . PBANKA_1461800 313 VIMCTNR|ID 0.071 . PBANKA_1461800 323 LDDALLR|PG 0.069 . PBANKA_1461800 326 ALLRPGR|ID 0.223 . PBANKA_1461800 329 RPGRIDR|KI 0.277 . PBANKA_1461800 330 PGRIDRK|IE 0.075 . PBANKA_1461800 341 NPNVEAR|IE 0.127 . PBANKA_1461800 346 ARIEILK|IH 0.067 . PBANKA_1461800 350 ILKIHSR|KM 0.079 . PBANKA_1461800 351 LKIHSRK|MN 0.092 . PBANKA_1461800 356 RKMNLMR|GI 0.152 . PBANKA_1461800 362 RGIDMVK|IA 0.068 . PBANKA_1461800 376 CSGAEVK|AV 0.103 . PBANKA_1461800 388 AGMFALR|ER 0.080 . PBANKA_1461800 390 MFALRER|RV 0.129 . PBANKA_1461800 391 FALRERR|VH 0.353 . PBANKA_1461800 405 FEMAVAK|VM 0.065 . PBANKA_1461800 408 AVAKVMK|QD 0.074 . PBANKA_1461800 413 MKQDAEK|NF 0.058 . PBANKA_1461800 418 EKNFTLR|KL 0.106 . PBANKA_1461800 419 KNFTLRK|LW 0.077 . PBANKA_1461800 422 TLRKLWK|-- 0.080 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1461800 ATGGCAGCAGTTGATATGCAAATGAGATCAAGTGACTTAGGAGAAGGAAAAAAAAATGAA AATGATAAAATTCATGGAAATAAAAATGACGAGGAAATGCAATCAGGCATCAAAACATAT TATGAAATGAAAATAGAAGAATATGAATCAATTATAAATAAAAAATTACAAAATAAAAAA CGGTTAGAAGCTCAAAGAAATGAATTAAATACAAGAGTTAGAGAATTAAGAGATGAAATC CAATATTTATTAGAAGCTGCATCATATGTTGGTGAAATAGCTAAACCAATGGGAAAAAAT AAAGTGCTTGTTAAAATCAACCCAGAAGGTAAATATGTAGTAGATATAGCTAGCCATATA GATATAACTAAATGTACACCAAATACAAGAGTAGCTTTATATAATGATTCATATAAGTTA CATAAAATATTACCAAGTAAAGTTGATCCCCTTGTTTCATTAATGAAAGTTGAAAAAGTA CCTGACTCAACATATGAAATGGTTGGAGGGTTAGATCAGCAAGTTAAAGAAGTTAAAGAA GTTATTGAATTACCAGTTAAACATCCAGAAATATTTGAATCATTAGGTATATCCCAACCT AAAGGAGTATTATTGTATGGACCCCCAGGTACTGGAAAAACTTTATTAGCACGTGCCGTA GCACATCATACAGATTGCACATTTATTAGAGTTTCGGGTTCTGAACTTGTTCAGAAATAT ATTGGAGAAGGATCTCGAATGGTTAGAGAATTGTTTGTTATGGCCAGAGAGCATGCACCA TCTATTATTTTTATGGATGAAATTGATTCTATAGGAAGTCAAAGAATAGAAGGTGAACAT GGAGATTCAGAAGTTCAAAGAACAATGATGGAATTATTAAATCAATTAGATGGATTTGAG TCGACACAGAATATTAAAGTTATTATGTGCACTAACAGAATTGATATATTAGATGATGCA TTATTAAGACCCGGACGGATCGATAGGAAAATCGAATTCCCAAATCCAAATGTAGAAGCA CGTATTGAAATTCTTAAAATTCATAGCAGAAAAATGAATTTAATGAGAGGTATTGATATG GTTAAAATCGCTACAGATATGAATAATTGCTCAGGAGCAGAAGTTAAAGCTGTTTGTACT GAAGCAGGTATGTTTGCATTAAGAGAAAGACGAGTTCATGTTACTCAGGAGGACTTTGAA ATGGCTGTTGCTAAAGTTATGAAACAAGATGCAGAGAAAAATTTTACCTTAAGAAAGTTA TGGAAATAA
  • Download Fasta

  • Fasta :-

    MAAVDMQMRSSDLGEGKKNENDKIHGNKNDEEMQSGIKTYYEMKIEEYESIINKKLQNKK RLEAQRNELNTRVRELRDEIQYLLEAASYVGEIAKPMGKNKVLVKINPEGKYVVDIASHI DITKCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKE VIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFE STQNIKVIMCTNRIDILDDALLRPGRIDRKIEFPNPNVEARIEILKIHSRKMNLMRGIDM VKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKQDAEKNFTLRKL WK

  • title: ATP binding site
  • coordinates: P208,P209,G210,T211,G212,K213,T214,L215,D266,N312
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1461800163 SKVPDSTYEM0.996unspPBANKA_1461800232 SFIRVSGSEL0.996unsp

PBANKA_146180      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India