PCHAS_0601700 | lysophospholipase, putative

  • Computed_GO_Component_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_0601700OTHER0.9998530.0001240.000023
No Results

  • Fasta :-

    >PCHAS_0601700 MVMEDGELNNDKLRNTKCNLDGDPKIGWLRNKNGLLLKTYAWIVQNPIGNVLLIHGFKVH TRLIFMRKNLKMSNNNEGLVIDNNNRYIYKDSWIEKFNQNGYSVYALDLQGHGESQSFGK IRGDFSCFDDLVDDVFQYMNQIQGETPSDNKKGDEPHNIVTTKKKKLPMYIVGYSIGGNI ALRILMLLEKEKEDRTKARNSNNYKNSNTRLSNSTNINDIDNGMYDMNNSNNYGFDKSCS SISAATNAIASDNHEECYDSFDKFNIKGCVSLSGMIRIKSVLDPGNISFKYFYLPLADFL AYVLPNPRILSESRYKKPGHFANMCKHYIFRNINGKKYKTMSEFIKATVKMDRNINYIPK DIPLLFVHSKDDSICSYEWTVSFYNKLNVNDKELHVVDGMNHDTTIKPGNEEILKKIIDW ICNLRTNDENK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0601700.fa Sequence name : PCHAS_0601700 Sequence length : 431 VALUES OF COMPUTED PARAMETERS Coef20 : 3.389 CoefTot : 0.000 ChDiff : 6 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.835 1.529 0.124 0.559 MesoH : -0.783 0.178 -0.388 0.170 MuHd_075 : 13.850 14.785 3.731 3.382 MuHd_095 : 11.056 6.492 2.439 1.993 MuHd_100 : 20.230 8.492 3.308 3.473 MuHd_105 : 27.343 10.003 5.413 4.305 Hmax_075 : -10.675 4.287 -3.959 0.429 Hmax_095 : -10.325 0.088 -3.751 0.079 Hmax_100 : -8.600 -1.400 -5.332 0.260 Hmax_105 : 7.233 6.183 -0.503 2.905 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9846 0.0154 DFMC : 0.9896 0.0104
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 431 PCHAS_0601700 MVMEDGELNNDKLRNTKCNLDGDPKIGWLRNKNGLLLKTYAWIVQNPIGNVLLIHGFKVHTRLIFMRKNLKMSNNNEGLV 80 IDNNNRYIYKDSWIEKFNQNGYSVYALDLQGHGESQSFGKIRGDFSCFDDLVDDVFQYMNQIQGETPSDNKKGDEPHNIV 160 TTKKKKLPMYIVGYSIGGNIALRILMLLEKEKEDRTKARNSNNYKNSNTRLSNSTNINDIDNGMYDMNNSNNYGFDKSCS 240 SISAATNAIASDNHEECYDSFDKFNIKGCVSLSGMIRIKSVLDPGNISFKYFYLPLADFLAYVLPNPRILSESRYKKPGH 320 FANMCKHYIFRNINGKKYKTMSEFIKATVKMDRNINYIPKDIPLLFVHSKDDSICSYEWTVSFYNKLNVNDKELHVVDGM 400 NHDTTIKPGNEEILKKIIDWICNLRTNDENK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0601700 12 GELNNDK|LR 0.057 . PCHAS_0601700 14 LNNDKLR|NT 0.108 . PCHAS_0601700 17 DKLRNTK|CN 0.110 . PCHAS_0601700 25 NLDGDPK|IG 0.053 . PCHAS_0601700 30 PKIGWLR|NK 0.075 . PCHAS_0601700 32 IGWLRNK|NG 0.055 . PCHAS_0601700 38 KNGLLLK|TY 0.062 . PCHAS_0601700 58 LLIHGFK|VH 0.058 . PCHAS_0601700 62 GFKVHTR|LI 0.091 . PCHAS_0601700 67 TRLIFMR|KN 0.097 . PCHAS_0601700 68 RLIFMRK|NL 0.087 . PCHAS_0601700 71 FMRKNLK|MS 0.062 . PCHAS_0601700 86 VIDNNNR|YI 0.079 . PCHAS_0601700 90 NNRYIYK|DS 0.081 . PCHAS_0601700 96 KDSWIEK|FN 0.080 . PCHAS_0601700 120 ESQSFGK|IR 0.069 . PCHAS_0601700 122 QSFGKIR|GD 0.134 . PCHAS_0601700 151 ETPSDNK|KG 0.051 . PCHAS_0601700 152 TPSDNKK|GD 0.160 . PCHAS_0601700 163 HNIVTTK|KK 0.061 . PCHAS_0601700 164 NIVTTKK|KK 0.083 . PCHAS_0601700 165 IVTTKKK|KL 0.108 . PCHAS_0601700 166 VTTKKKK|LP 0.087 . PCHAS_0601700 183 GGNIALR|IL 0.088 . PCHAS_0601700 190 ILMLLEK|EK 0.060 . PCHAS_0601700 192 MLLEKEK|ED 0.062 . PCHAS_0601700 195 EKEKEDR|TK 0.075 . PCHAS_0601700 197 EKEDRTK|AR 0.061 . PCHAS_0601700 199 EDRTKAR|NS 0.129 . PCHAS_0601700 205 RNSNNYK|NS 0.075 . PCHAS_0601700 210 YKNSNTR|LS 0.075 . PCHAS_0601700 237 NNYGFDK|SC 0.088 . PCHAS_0601700 263 CYDSFDK|FN 0.064 . PCHAS_0601700 267 FDKFNIK|GC 0.059 . PCHAS_0601700 277 SLSGMIR|IK 0.104 . PCHAS_0601700 279 SGMIRIK|SV 0.116 . PCHAS_0601700 290 PGNISFK|YF 0.069 . PCHAS_0601700 308 YVLPNPR|IL 0.075 . PCHAS_0601700 314 RILSESR|YK 0.089 . PCHAS_0601700 316 LSESRYK|KP 0.069 . PCHAS_0601700 317 SESRYKK|PG 0.346 . PCHAS_0601700 326 HFANMCK|HY 0.064 . PCHAS_0601700 331 CKHYIFR|NI 0.103 . PCHAS_0601700 336 FRNINGK|KY 0.067 . PCHAS_0601700 337 RNINGKK|YK 0.134 . PCHAS_0601700 339 INGKKYK|TM 0.084 . PCHAS_0601700 346 TMSEFIK|AT 0.084 . PCHAS_0601700 350 FIKATVK|MD 0.059 . PCHAS_0601700 353 ATVKMDR|NI 0.100 . PCHAS_0601700 360 NINYIPK|DI 0.075 . PCHAS_0601700 370 LLFVHSK|DD 0.076 . PCHAS_0601700 386 TVSFYNK|LN 0.064 . PCHAS_0601700 392 KLNVNDK|EL 0.078 . PCHAS_0601700 407 NHDTTIK|PG 0.056 . PCHAS_0601700 415 GNEEILK|KI 0.064 . PCHAS_0601700 416 NEEILKK|II 0.115 . PCHAS_0601700 425 DWICNLR|TN 0.073 . PCHAS_0601700 431 RTNDENK|-- 0.073 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0601700 ATGGTGATGGAAGACGGTGAATTGAATAATGACAAATTAAGAAATACAAAATGCAATTTA GATGGTGATCCTAAGATTGGTTGGTTACGTAATAAAAATGGTTTACTTTTAAAAACATAC GCGTGGATAGTTCAAAACCCTATAGGAAATGTATTGTTAATACATGGATTCAAAGTTCAT ACTCGATTAATTTTTATGAGAAAAAATTTAAAAATGTCAAATAACAATGAAGGATTAGTA ATAGACAATAATAATCGCTATATTTATAAGGATAGTTGGATTGAAAAATTTAATCAAAAT GGTTATTCAGTATACGCGTTAGATTTACAAGGGCATGGCGAATCACAATCATTTGGAAAA ATAAGAGGCGATTTTAGTTGTTTTGATGATTTAGTTGATGATGTATTCCAATATATGAAT CAAATTCAAGGTGAAACCCCAAGTGATAATAAAAAGGGTGATGAACCCCATAATATAGTA ACAACTAAAAAAAAGAAGCTTCCTATGTATATTGTTGGGTATTCGATTGGAGGAAATATT GCTTTAAGAATATTAATGTTATTAGAGAAAGAAAAAGAAGACAGAACTAAGGCGCGAAAT TCAAATAACTATAAAAATAGTAACACCAGGCTAAGCAATTCTACTAATATTAATGATATT GACAATGGTATGTATGATATGAATAATTCAAATAATTATGGTTTCGATAAATCATGTTCT AGTATCTCTGCTGCGACAAATGCTATTGCTAGTGATAATCATGAAGAATGTTATGATAGT TTCGATAAATTCAATATTAAAGGCTGCGTATCTTTGTCTGGTATGATAAGAATAAAATCA GTATTGGATCCTGGAAATATATCATTTAAGTATTTTTATTTGCCTTTAGCAGACTTCCTG GCTTATGTCTTACCTAATCCACGAATTTTGTCAGAATCACGTTATAAAAAGCCCGGACAT TTTGCTAATATGTGTAAACATTATATATTTCGAAATATTAATGGAAAAAAATATAAAACT ATGTCTGAATTTATAAAAGCAACGGTAAAAATGGATCGTAATATTAATTATATACCAAAA GATATTCCTTTATTATTTGTGCATTCAAAAGATGATAGTATTTGTTCTTATGAATGGACA GTTTCGTTTTATAATAAATTAAATGTTAATGATAAGGAATTACATGTTGTTGATGGTATG AATCATGATACAACGATAAAACCAGGAAATGAAGAAATTTTAAAAAAAATTATTGATTGG ATTTGTAATTTAAGAACGAATGATGAAAACAAATAA
  • Download Fasta

  • Fasta :-

    MVMEDGELNNDKLRNTKCNLDGDPKIGWLRNKNGLLLKTYAWIVQNPIGNVLLIHGFKVH TRLIFMRKNLKMSNNNEGLVIDNNNRYIYKDSWIEKFNQNGYSVYALDLQGHGESQSFGK IRGDFSCFDDLVDDVFQYMNQIQGETPSDNKKGDEPHNIVTTKKKKLPMYIVGYSIGGNI ALRILMLLEKEKEDRTKARNSNNYKNSNTRLSNSTNINDIDNGMYDMNNSNNYGFDKSCS SISAATNAIASDNHEECYDSFDKFNIKGCVSLSGMIRIKSVLDPGNISFKYFYLPLADFL AYVLPNPRILSESRYKKPGHFANMCKHYIFRNINGKKYKTMSEFIKATVKMDRNINYIPK DIPLLFVHSKDDSICSYEWTVSFYNKLNVNDKELHVVDGMNHDTTIKPGNEEILKKIIDW ICNLRTNDENK

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_0601700280 SIRIKSVLDP0.993unsp

PCHAS_060170      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India