PCHAS_0707200 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_0707200OTHER0.9663080.0000750.033617
No Results

  • Fasta :-

    >PCHAS_0707200 MNGFLYKLNKFHRINKNIYHSLSNGNNILNYKYKGKICTINGKGGNKNKAYFSYESYNND DKEIVDMIDGISFTIRNNSSIYKEETKNIPIVILHGCYGSKRNFRNFNKLLKSNKIVSID LPNHGESKHTNDMKYDNIEEDIKNVLTKLNITSCCLVGFSLGGKVSMYTALKNPTLFSHL IIMDILPYNYYSNNIEIALPYSIRKMSKTLYDIKINKNPKNKLEFLKYLKEELPNIPDSF SQFICMSLKDNEQKNKLTWNINVETIYNEIHNITNFPLNFEKYKYMNPCSFVIAKKSDLA YTIPDYDQIIKNFFPNSKSFILENSSHAVYVDAPHECAQIINQTISL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0707200.fa Sequence name : PCHAS_0707200 Sequence length : 347 VALUES OF COMPUTED PARAMETERS Coef20 : 3.426 CoefTot : -4.311 ChDiff : 11 ZoneTo : 54 KR : 10 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.306 1.476 0.287 0.473 MesoH : -0.323 0.366 -0.320 0.235 MuHd_075 : 26.007 24.399 9.877 6.634 MuHd_095 : 37.416 28.343 12.555 9.027 MuHd_100 : 43.194 31.167 13.646 10.668 MuHd_105 : 43.343 30.913 13.847 10.385 Hmax_075 : 9.217 15.167 1.667 5.063 Hmax_095 : 7.800 10.500 0.499 4.400 Hmax_100 : 11.700 15.500 1.787 5.900 Hmax_105 : 11.000 16.400 1.589 5.005 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3051 0.6949 DFMC : 0.3834 0.6166 This protein is probably imported in mitochondria. f(Ser) = 0.0556 f(Arg) = 0.0185 CMi = 0.57915 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 347 PCHAS_0707200 MNGFLYKLNKFHRINKNIYHSLSNGNNILNYKYKGKICTINGKGGNKNKAYFSYESYNNDDKEIVDMIDGISFTIRNNSS 80 IYKEETKNIPIVILHGCYGSKRNFRNFNKLLKSNKIVSIDLPNHGESKHTNDMKYDNIEEDIKNVLTKLNITSCCLVGFS 160 LGGKVSMYTALKNPTLFSHLIIMDILPYNYYSNNIEIALPYSIRKMSKTLYDIKINKNPKNKLEFLKYLKEELPNIPDSF 240 SQFICMSLKDNEQKNKLTWNINVETIYNEIHNITNFPLNFEKYKYMNPCSFVIAKKSDLAYTIPDYDQIIKNFFPNSKSF 320 ILENSSHAVYVDAPHECAQIINQTISL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0707200 7 MNGFLYK|LN 0.061 . PCHAS_0707200 10 FLYKLNK|FH 0.065 . PCHAS_0707200 13 KLNKFHR|IN 0.128 . PCHAS_0707200 16 KFHRINK|NI 0.171 . PCHAS_0707200 32 NNILNYK|YK 0.073 . PCHAS_0707200 34 ILNYKYK|GK 0.090 . PCHAS_0707200 36 NYKYKGK|IC 0.071 . PCHAS_0707200 43 ICTINGK|GG 0.060 . PCHAS_0707200 47 NGKGGNK|NK 0.052 . PCHAS_0707200 49 KGGNKNK|AY 0.080 . PCHAS_0707200 62 SYNNDDK|EI 0.070 . PCHAS_0707200 76 GISFTIR|NN 0.142 . PCHAS_0707200 83 NNSSIYK|EE 0.072 . PCHAS_0707200 87 IYKEETK|NI 0.065 . PCHAS_0707200 101 HGCYGSK|RN 0.060 . PCHAS_0707200 102 GCYGSKR|NF 0.141 . PCHAS_0707200 105 GSKRNFR|NF 0.323 . PCHAS_0707200 109 NFRNFNK|LL 0.059 . PCHAS_0707200 112 NFNKLLK|SN 0.073 . PCHAS_0707200 115 KLLKSNK|IV 0.090 . PCHAS_0707200 128 PNHGESK|HT 0.072 . PCHAS_0707200 134 KHTNDMK|YD 0.079 . PCHAS_0707200 143 NIEEDIK|NV 0.067 . PCHAS_0707200 148 IKNVLTK|LN 0.073 . PCHAS_0707200 164 GFSLGGK|VS 0.055 . PCHAS_0707200 172 SMYTALK|NP 0.052 . PCHAS_0707200 204 ALPYSIR|KM 0.093 . PCHAS_0707200 205 LPYSIRK|MS 0.084 . PCHAS_0707200 208 SIRKMSK|TL 0.074 . PCHAS_0707200 214 KTLYDIK|IN 0.053 . PCHAS_0707200 217 YDIKINK|NP 0.057 . PCHAS_0707200 220 KINKNPK|NK 0.064 . PCHAS_0707200 222 NKNPKNK|LE 0.062 . PCHAS_0707200 227 NKLEFLK|YL 0.077 . PCHAS_0707200 230 EFLKYLK|EE 0.052 . PCHAS_0707200 249 FICMSLK|DN 0.078 . PCHAS_0707200 254 LKDNEQK|NK 0.060 . PCHAS_0707200 256 DNEQKNK|LT 0.068 . PCHAS_0707200 282 FPLNFEK|YK 0.065 . PCHAS_0707200 284 LNFEKYK|YM 0.075 . PCHAS_0707200 295 CSFVIAK|KS 0.069 . PCHAS_0707200 296 SFVIAKK|SD 0.107 . PCHAS_0707200 311 DYDQIIK|NF 0.057 . PCHAS_0707200 318 NFFPNSK|SF 0.070 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0707200 ATGAATGGATTTTTATATAAGTTAAATAAGTTTCACCGGATAAATAAAAATATATATCAC TCGTTAAGTAATGGAAATAATATTTTGAACTATAAATATAAAGGTAAAATATGCACAATA AATGGAAAAGGTGGAAATAAAAATAAAGCATATTTTTCTTATGAGTCATATAATAATGAT GATAAAGAAATTGTAGATATGATTGATGGAATATCTTTTACAATACGTAATAATAGTAGT ATATATAAAGAAGAGACAAAAAATATTCCTATTGTAATATTACATGGTTGTTATGGAAGT AAAAGAAATTTTCGTAATTTTAATAAATTACTTAAATCAAATAAAATAGTATCAATAGAC TTACCAAATCATGGAGAGTCTAAACATACGAATGATATGAAATATGATAATATTGAAGAA GATATAAAAAATGTGTTAACTAAATTAAATATAACAAGTTGTTGTTTAGTTGGCTTTAGT TTGGGAGGAAAGGTATCAATGTATACTGCATTAAAAAATCCAACTTTATTTTCTCATCTA ATAATAATGGATATATTACCTTATAATTATTATTCGAATAATATAGAAATTGCATTACCT TATAGTATTCGAAAAATGAGTAAAACATTATATGATATAAAAATAAATAAAAATCCGAAA AATAAATTAGAATTTTTAAAATATTTAAAAGAAGAATTACCAAACATTCCAGATTCATTT TCACAATTTATTTGTATGTCACTTAAAGACAATGAACAAAAAAATAAATTAACATGGAAT ATAAATGTTGAGACGATATATAATGAAATTCATAATATTACAAATTTTCCATTAAATTTT GAAAAATATAAATATATGAATCCCTGTAGTTTTGTAATAGCAAAGAAATCAGATCTAGCT TATACTATACCTGATTATGATCAAATTATTAAAAATTTTTTTCCTAACTCCAAAAGTTTT ATTTTAGAAAACTCATCTCATGCTGTATATGTAGATGCACCCCATGAGTGTGCCCAAATT ATTAACCAAACGATTTCCTTATAA
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  • Fasta :-

    MNGFLYKLNKFHRINKNIYHSLSNGNNILNYKYKGKICTINGKGGNKNKAYFSYESYNND DKEIVDMIDGISFTIRNNSSIYKEETKNIPIVILHGCYGSKRNFRNFNKLLKSNKIVSID LPNHGESKHTNDMKYDNIEEDIKNVLTKLNITSCCLVGFSLGGKVSMYTALKNPTLFSHL IIMDILPYNYYSNNIEIALPYSIRKMSKTLYDIKINKNPKNKLEFLKYLKEELPNIPDSF SQFICMSLKDNEQKNKLTWNINVETIYNEIHNITNFPLNFEKYKYMNPCSFVIAKKSDLA YTIPDYDQIIKNFFPNSKSFILENSSHAVYVDAPHECAQIINQTISL

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PCHAS_070720      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India