PCHAS_0708500 | OTU domain-containing protein, putative

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  • Computed_GO_Function_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_0708500OTHER0.9999740.0000030.000023
No Results

  • Fasta :-

    >PCHAS_0708500 MNEEVKKINYNEYKRRLKKLLEEINKEKKKKTIHKDKQNENILKLEEELKQLNELYNGKD NNNNNTVVEQNNYNDIIPDNLYSYNVVSKKSLKNKAKMKRREMEEELNDQSRNKIGEEEY NQLLDILKVKNQSIYSIAPDGNCLYESIIHQLKQRIKNFKYSQNDFLQIINEDNFSLDNI DLKKYQQNINNFDFSIFQSFDPNHLSSDILRFLTSVYILQNSDSFVNFIYEYAEEGNDDP CYSYCQQIMSGIYGSEIEITALSNILKKKITVQDINMSVSYGEDYEEELFICFHHKLYTL GKHYNSVIDL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0708500.fa Sequence name : PCHAS_0708500 Sequence length : 310 VALUES OF COMPUTED PARAMETERS Coef20 : 3.479 CoefTot : -0.134 ChDiff : -9 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.259 0.718 -0.036 0.399 MesoH : -0.823 0.021 -0.421 0.175 MuHd_075 : 11.419 5.517 3.415 3.744 MuHd_095 : 32.284 19.014 9.430 6.448 MuHd_100 : 17.792 10.923 5.996 3.091 MuHd_105 : 2.098 6.274 1.127 0.964 Hmax_075 : -24.033 -7.400 -8.472 -0.960 Hmax_095 : -9.625 1.400 -4.475 0.420 Hmax_100 : -21.000 -4.400 -7.339 -1.620 Hmax_105 : -21.000 -4.400 -7.339 -1.660 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9264 0.0736 DFMC : 0.9694 0.0306
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 310 PCHAS_0708500 MNEEVKKINYNEYKRRLKKLLEEINKEKKKKTIHKDKQNENILKLEEELKQLNELYNGKDNNNNNTVVEQNNYNDIIPDN 80 LYSYNVVSKKSLKNKAKMKRREMEEELNDQSRNKIGEEEYNQLLDILKVKNQSIYSIAPDGNCLYESIIHQLKQRIKNFK 160 YSQNDFLQIINEDNFSLDNIDLKKYQQNINNFDFSIFQSFDPNHLSSDILRFLTSVYILQNSDSFVNFIYEYAEEGNDDP 240 CYSYCQQIMSGIYGSEIEITALSNILKKKITVQDINMSVSYGEDYEEELFICFHHKLYTLGKHYNSVIDL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0708500 6 -MNEEVK|KI 0.063 . PCHAS_0708500 7 MNEEVKK|IN 0.094 . PCHAS_0708500 14 INYNEYK|RR 0.064 . PCHAS_0708500 15 NYNEYKR|RL 0.140 . PCHAS_0708500 16 YNEYKRR|LK 0.120 . PCHAS_0708500 18 EYKRRLK|KL 0.105 . PCHAS_0708500 19 YKRRLKK|LL 0.376 . PCHAS_0708500 26 LLEEINK|EK 0.059 . PCHAS_0708500 28 EEINKEK|KK 0.062 . PCHAS_0708500 29 EINKEKK|KK 0.095 . PCHAS_0708500 30 INKEKKK|KT 0.135 . PCHAS_0708500 31 NKEKKKK|TI 0.154 . PCHAS_0708500 35 KKKTIHK|DK 0.076 . PCHAS_0708500 37 KTIHKDK|QN 0.090 . PCHAS_0708500 44 QNENILK|LE 0.058 . PCHAS_0708500 50 KLEEELK|QL 0.062 . PCHAS_0708500 59 NELYNGK|DN 0.064 . PCHAS_0708500 89 SYNVVSK|KS 0.064 . PCHAS_0708500 90 YNVVSKK|SL 0.184 . PCHAS_0708500 93 VSKKSLK|NK 0.061 . PCHAS_0708500 95 KKSLKNK|AK 0.102 . PCHAS_0708500 97 SLKNKAK|MK 0.086 . PCHAS_0708500 99 KNKAKMK|RR 0.074 . PCHAS_0708500 100 NKAKMKR|RE 0.217 . PCHAS_0708500 101 KAKMKRR|EM 0.232 . PCHAS_0708500 112 ELNDQSR|NK 0.110 . PCHAS_0708500 114 NDQSRNK|IG 0.071 . PCHAS_0708500 128 QLLDILK|VK 0.058 . PCHAS_0708500 130 LDILKVK|NQ 0.063 . PCHAS_0708500 153 SIIHQLK|QR 0.063 . PCHAS_0708500 155 IHQLKQR|IK 0.089 . PCHAS_0708500 157 QLKQRIK|NF 0.066 . PCHAS_0708500 160 QRIKNFK|YS 0.077 . PCHAS_0708500 183 LDNIDLK|KY 0.070 . PCHAS_0708500 184 DNIDLKK|YQ 0.088 . PCHAS_0708500 211 LSSDILR|FL 0.119 . PCHAS_0708500 267 ALSNILK|KK 0.073 . PCHAS_0708500 268 LSNILKK|KI 0.120 . PCHAS_0708500 269 SNILKKK|IT 0.143 . PCHAS_0708500 296 FICFHHK|LY 0.067 . PCHAS_0708500 302 KLYTLGK|HY 0.074 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0708500 ATGAATGAGGAGGTAAAGAAAATAAATTATAATGAATATAAGAGAAGACTAAAAAAACTA TTAGAAGAAATAAACAAAGAAAAGAAAAAAAAAACAATTCATAAAGATAAGCAAAATGAA AATATATTAAAACTCGAAGAGGAGCTAAAACAATTAAATGAATTATACAACGGAAAAGAT AATAATAATAATAATACAGTGGTAGAACAAAATAACTACAATGATATAATTCCTGATAAC TTATATTCCTATAATGTCGTTTCAAAAAAGTCATTAAAAAATAAAGCAAAAATGAAGAGG AGAGAAATGGAAGAAGAACTAAATGACCAATCAAGAAATAAGATTGGAGAAGAAGAATAT AATCAATTATTAGATATTTTAAAAGTAAAAAATCAAAGTATTTATTCTATAGCACCAGAT GGTAATTGCTTATATGAATCTATTATACATCAACTTAAACAAAGAATTAAAAATTTTAAA TATTCCCAAAATGACTTTTTACAAATTATAAATGAAGACAACTTTTCATTAGATAATATA GATTTAAAAAAATATCAACAAAATATAAATAATTTTGATTTTTCGATTTTTCAAAGTTTT GATCCAAATCATTTGTCTAGTGACATACTCCGATTTCTTACTTCAGTCTATATATTACAA AATAGTGATTCATTTGTCAATTTTATTTATGAATATGCAGAAGAAGGAAATGATGATCCG TGCTACAGCTATTGCCAACAAATTATGAGCGGAATATACGGGAGTGAAATTGAAATAACG GCCTTATCAAATATTTTGAAAAAAAAAATTACAGTACAAGACATAAACATGAGCGTATCA TATGGGGAAGATTATGAAGAAGAATTATTTATATGCTTCCACCATAAGTTATATACGCTA GGCAAGCACTACAATTCTGTTATAGACTTATGA
  • Download Fasta

  • Fasta :-

    MNEEVKKINYNEYKRRLKKLLEEINKEKKKKTIHKDKQNENILKLEEELKQLNELYNGKD NNNNNTVVEQNNYNDIIPDNLYSYNVVSKKSLKNKAKMKRREMEEELNDQSRNKIGEEEY NQLLDILKVKNQSIYSIAPDGNCLYESIIHQLKQRIKNFKYSQNDFLQIINEDNFSLDNI DLKKYQQNINNFDFSIFQSFDPNHLSSDILRFLTSVYILQNSDSFVNFIYEYAEEGNDDP CYSYCQQIMSGIYGSEIEITALSNILKKKITVQDINMSVSYGEDYEEELFICFHHKLYTL GKHYNSVIDL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0708500280 SNMSVSYGED0.99unspPCHAS_0708500306 SKHYNSVIDL0.992unsp

PCHAS_070850      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India