PCHAS_0721300 | BEM46-like protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:  GO:0016298      

  • Curated_GO_Functions:  lipase activity      

  • Curated_GO_Processes:  lipid metabolic process      

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0721300OTHER0.8749030.1219710.003125
No Results

  • Fasta :-

    >PCHAS_0721300 MVLKKLIISIVVAIIAVLVVINTTIYFIQDSLIFVKIKADPQYIKPLGPNYEEIMMPTED NQKLRCWFIKTEDYKNKPVILYFLGNGSYLEKNVEIYNLIVGRVDVSVFSCSNRGSGDND LSPSEALFYKDGQAYINYLTSINMKHIFVLGTSMGGAVAIETAKNNVNHISGLIVQNSFL SMKEMAKLAQPFLFFFIISYDLLIRTKMNNEQKIKENRVPALFNISEKDKIVPPSHGKKL YELCPSQKFIYTAKDGEHVDILVNDDGSYHRSMKIFIEAAISKYGKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0721300.fa Sequence name : PCHAS_0721300 Sequence length : 287 VALUES OF COMPUTED PARAMETERS Coef20 : 5.001 CoefTot : 0.088 ChDiff : 5 ZoneTo : 29 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.129 3.229 0.536 0.964 MesoH : 0.094 0.637 -0.303 0.339 MuHd_075 : 21.974 19.883 6.853 5.906 MuHd_095 : 21.285 20.799 6.893 6.530 MuHd_100 : 15.939 14.996 5.557 4.718 MuHd_105 : 18.077 16.351 6.596 5.085 Hmax_075 : 18.637 27.200 4.995 7.820 Hmax_095 : 20.475 29.750 5.851 8.750 Hmax_100 : 20.600 29.500 5.601 8.600 Hmax_105 : 20.900 30.800 6.214 9.200 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7183 0.2817 DFMC : 0.9390 0.0610
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 287 PCHAS_0721300 MVLKKLIISIVVAIIAVLVVINTTIYFIQDSLIFVKIKADPQYIKPLGPNYEEIMMPTEDNQKLRCWFIKTEDYKNKPVI 80 LYFLGNGSYLEKNVEIYNLIVGRVDVSVFSCSNRGSGDNDLSPSEALFYKDGQAYINYLTSINMKHIFVLGTSMGGAVAI 160 ETAKNNVNHISGLIVQNSFLSMKEMAKLAQPFLFFFIISYDLLIRTKMNNEQKIKENRVPALFNISEKDKIVPPSHGKKL 240 YELCPSQKFIYTAKDGEHVDILVNDDGSYHRSMKIFIEAAISKYGKK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0721300 4 ---MVLK|KL 0.065 . PCHAS_0721300 5 --MVLKK|LI 0.107 . PCHAS_0721300 36 DSLIFVK|IK 0.057 . PCHAS_0721300 38 LIFVKIK|AD 0.069 . PCHAS_0721300 45 ADPQYIK|PL 0.071 . PCHAS_0721300 63 PTEDNQK|LR 0.056 . PCHAS_0721300 65 EDNQKLR|CW 0.132 . PCHAS_0721300 70 LRCWFIK|TE 0.074 . PCHAS_0721300 75 IKTEDYK|NK 0.062 . PCHAS_0721300 77 TEDYKNK|PV 0.090 . PCHAS_0721300 92 NGSYLEK|NV 0.083 . PCHAS_0721300 103 YNLIVGR|VD 0.077 . PCHAS_0721300 114 VFSCSNR|GS 0.152 . PCHAS_0721300 130 SEALFYK|DG 0.080 . PCHAS_0721300 145 LTSINMK|HI 0.085 . PCHAS_0721300 164 VAIETAK|NN 0.061 . PCHAS_0721300 183 NSFLSMK|EM 0.059 . PCHAS_0721300 187 SMKEMAK|LA 0.072 . PCHAS_0721300 205 SYDLLIR|TK 0.072 . PCHAS_0721300 207 DLLIRTK|MN 0.059 . PCHAS_0721300 213 KMNNEQK|IK 0.073 . PCHAS_0721300 215 NNEQKIK|EN 0.058 . PCHAS_0721300 218 QKIKENR|VP 0.071 . PCHAS_0721300 228 LFNISEK|DK 0.071 . PCHAS_0721300 230 NISEKDK|IV 0.086 . PCHAS_0721300 238 VPPSHGK|KL 0.061 . PCHAS_0721300 239 PPSHGKK|LY 0.120 . PCHAS_0721300 248 ELCPSQK|FI 0.082 . PCHAS_0721300 254 KFIYTAK|DG 0.079 . PCHAS_0721300 271 DDGSYHR|SM 0.101 . PCHAS_0721300 274 SYHRSMK|IF 0.158 . PCHAS_0721300 283 IEAAISK|YG 0.067 . PCHAS_0721300 286 AISKYGK|K- 0.073 . PCHAS_0721300 287 ISKYGKK|-- 0.106 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0721300 ATGGTACTTAAAAAGTTGATCATATCCATTGTAGTTGCTATCATAGCAGTCTTAGTTGTG ATAAACACGACCATATACTTTATCCAGGACAGTTTAATTTTCGTAAAAATAAAGGCCGAT CCCCAATATATCAAACCCTTAGGACCCAATTATGAGGAAATTATGATGCCAACCGAAGAT AATCAGAAACTTCGATGTTGGTTTATAAAAACTGAAGACTATAAGAACAAGCCAGTTATT CTCTATTTCCTTGGAAATGGAAGTTATTTGGAGAAAAATGTTGAAATATACAATTTGATA GTTGGAAGAGTAGACGTGAGCGTTTTCTCATGTTCAAATAGAGGTTCTGGAGATAATGAT CTTAGCCCATCCGAAGCTCTATTTTACAAAGACGGCCAAGCATACATAAATTATCTTACG AGCATAAATATGAAACATATATTTGTGCTTGGAACGTCCATGGGTGGTGCCGTTGCTATT GAGACAGCTAAGAATAATGTCAATCATATATCGGGCTTAATCGTTCAAAACTCATTTTTA AGCATGAAAGAAATGGCAAAACTTGCGCAACCATTTTTATTTTTTTTCATCATATCTTAT GATTTACTAATAAGAACAAAAATGAATAATGAACAAAAAATAAAGGAAAATCGTGTTCCA GCCTTGTTTAATATTTCTGAAAAGGATAAAATCGTTCCCCCAAGTCATGGAAAAAAACTA TACGAGCTATGCCCAAGCCAGAAATTTATTTACACTGCAAAAGATGGAGAGCACGTTGAC ATCCTCGTAAATGATGATGGGTCTTACCATCGATCGATGAAAATATTTATTGAAGCAGCA ATTTCCAAATACGGCAAAAAATAA
  • Download Fasta

  • Fasta :-

    MVLKKLIISIVVAIIAVLVVINTTIYFIQDSLIFVKIKADPQYIKPLGPNYEEIMMPTED NQKLRCWFIKTEDYKNKPVILYFLGNGSYLEKNVEIYNLIVGRVDVSVFSCSNRGSGDND LSPSEALFYKDGQAYINYLTSINMKHIFVLGTSMGGAVAIETAKNNVNHISGLIVQNSFL SMKEMAKLAQPFLFFFIISYDLLIRTKMNNEQKIKENRVPALFNISEKDKIVPPSHGKKL YELCPSQKFIYTAKDGEHVDILVNDDGSYHRSMKIFIEAAISKYGKK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0721300122 SDNDLSPSEA0.995unspPCHAS_0721300181 SNSFLSMKEM0.991unsp

PCHAS_072130      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India