PCHAS_0731400 | lysophospholipase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0731400OTHER0.9998120.0000770.000112
No Results

  • Fasta :-

    >PCHAS_0731400 MEGIELNNDELRSTTISKLDGDPKIGWICNKKGLLLKTYGWLVKNAAGIILLIHGFRVHT RLTFMRINLQMPNNNEDIVVDTNNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQAWNNV RGEFSSFDDLVDDVIQYMNQIQDEISNDNQTNDDILNNNQTNDDILNNNQMNDESYDIVA TKKKKLPMYVIGYSMGGNIALRMLQVLNKEKGYNINTGESDNYKKCKAILDNSNHINEID NDMNNSKNDDPGTSSAGTSATANASTSDKHVEYDNYLDKFNIKGCISLSSMITLNETRNV GNILIKYLYLPVTSLLSRVAPNAKFPSDPDYKQFEYINNTYRYDKFRNPDETKFKYVYEL LKATVDVNYNINYMPKDIPLLFLHSSDDSVCHYQGTVSFHSKAKVETKNIYIFDKLDHAI TAAPGNEEVLNLIINWINNLRMNDGDKIKHEIEDKKKNEI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0731400.fa Sequence name : PCHAS_0731400 Sequence length : 460 VALUES OF COMPUTED PARAMETERS Coef20 : 3.537 CoefTot : 0.000 ChDiff : -15 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.912 1.400 0.015 0.624 MesoH : -0.812 0.061 -0.456 0.150 MuHd_075 : 16.444 14.921 4.377 4.759 MuHd_095 : 14.461 8.837 3.854 1.775 MuHd_100 : 16.052 4.092 2.658 1.636 MuHd_105 : 26.015 7.869 6.145 3.801 Hmax_075 : -7.233 2.100 -4.183 1.528 Hmax_095 : -3.500 6.000 -2.119 1.210 Hmax_100 : -4.300 -0.900 -3.396 0.600 Hmax_105 : -0.117 3.267 -1.080 2.193 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9065 0.0935 DFMC : 0.9525 0.0475
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 460 PCHAS_0731400 MEGIELNNDELRSTTISKLDGDPKIGWICNKKGLLLKTYGWLVKNAAGIILLIHGFRVHTRLTFMRINLQMPNNNEDIVV 80 DTNNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQAWNNVRGEFSSFDDLVDDVIQYMNQIQDEISNDNQTNDDILNNNQ 160 TNDDILNNNQMNDESYDIVATKKKKLPMYVIGYSMGGNIALRMLQVLNKEKGYNINTGESDNYKKCKAILDNSNHINEID 240 NDMNNSKNDDPGTSSAGTSATANASTSDKHVEYDNYLDKFNIKGCISLSSMITLNETRNVGNILIKYLYLPVTSLLSRVA 320 PNAKFPSDPDYKQFEYINNTYRYDKFRNPDETKFKYVYELLKATVDVNYNINYMPKDIPLLFLHSSDDSVCHYQGTVSFH 400 SKAKVETKNIYIFDKLDHAITAAPGNEEVLNLIINWINNLRMNDGDKIKHEIEDKKKNEI 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0731400 12 LNNDELR|ST 0.146 . PCHAS_0731400 18 RSTTISK|LD 0.063 . PCHAS_0731400 24 KLDGDPK|IG 0.059 . PCHAS_0731400 31 IGWICNK|KG 0.054 . PCHAS_0731400 32 GWICNKK|GL 0.090 . PCHAS_0731400 37 KKGLLLK|TY 0.067 . PCHAS_0731400 44 TYGWLVK|NA 0.070 . PCHAS_0731400 57 LLIHGFR|VH 0.075 . PCHAS_0731400 61 GFRVHTR|LT 0.109 . PCHAS_0731400 66 TRLTFMR|IN 0.108 . PCHAS_0731400 89 NNYYIYK|DS 0.074 . PCHAS_0731400 95 KDSWIEK|FN 0.080 . PCHAS_0731400 121 QAWNNVR|GE 0.105 . PCHAS_0731400 182 YDIVATK|KK 0.056 . PCHAS_0731400 183 DIVATKK|KK 0.078 . PCHAS_0731400 184 IVATKKK|KL 0.101 . PCHAS_0731400 185 VATKKKK|LP 0.091 . PCHAS_0731400 202 GGNIALR|ML 0.086 . PCHAS_0731400 209 MLQVLNK|EK 0.076 . PCHAS_0731400 211 QVLNKEK|GY 0.064 . PCHAS_0731400 224 GESDNYK|KC 0.079 . PCHAS_0731400 225 ESDNYKK|CK 0.082 . PCHAS_0731400 227 DNYKKCK|AI 0.086 . PCHAS_0731400 247 NDMNNSK|ND 0.070 . PCHAS_0731400 269 NASTSDK|HV 0.087 . PCHAS_0731400 279 YDNYLDK|FN 0.073 . PCHAS_0731400 283 LDKFNIK|GC 0.064 . PCHAS_0731400 298 ITLNETR|NV 0.117 . PCHAS_0731400 306 VGNILIK|YL 0.067 . PCHAS_0731400 318 VTSLLSR|VA 0.083 . PCHAS_0731400 324 RVAPNAK|FP 0.066 . PCHAS_0731400 332 PSDPDYK|QF 0.069 . PCHAS_0731400 342 YINNTYR|YD 0.087 . PCHAS_0731400 345 NTYRYDK|FR 0.137 . PCHAS_0731400 347 YRYDKFR|NP 0.103 . PCHAS_0731400 353 RNPDETK|FK 0.067 . PCHAS_0731400 355 PDETKFK|YV 0.099 . PCHAS_0731400 362 YVYELLK|AT 0.061 . PCHAS_0731400 376 NINYMPK|DI 0.075 . PCHAS_0731400 402 TVSFHSK|AK 0.073 . PCHAS_0731400 404 SFHSKAK|VE 0.071 . PCHAS_0731400 408 KAKVETK|NI 0.069 . PCHAS_0731400 415 NIYIFDK|LD 0.068 . PCHAS_0731400 441 NWINNLR|MN 0.075 . PCHAS_0731400 447 RMNDGDK|IK 0.070 . PCHAS_0731400 449 NDGDKIK|HE 0.061 . PCHAS_0731400 455 KHEIEDK|KK 0.061 . PCHAS_0731400 456 HEIEDKK|KN 0.106 . PCHAS_0731400 457 EIEDKKK|NE 0.087 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0731400 ATGGAAGGAATTGAATTGAATAATGATGAATTAAGAAGTACTACAATAAGTAAATTAGAT GGTGATCCTAAGATAGGTTGGATATGTAATAAAAAGGGTTTACTTTTAAAAACATATGGG TGGCTAGTTAAAAATGCTGCAGGAATTATATTGTTAATACATGGATTCAGAGTTCATACT CGATTAACTTTTATGAGAATAAATTTACAAATGCCAAATAACAATGAAGACATTGTAGTA GACACTAATAATTACTATATTTATAAAGATAGTTGGATTGAAAAATTTAATCAAAATGGT TATTCAGTGTATGCACTAGATTTACAAGGACACGGCGAATCACAAGCATGGAATAATGTA AGAGGTGAATTTAGTTCTTTTGATGATCTAGTTGATGATGTAATACAATATATGAATCAA ATTCAAGATGAAATCTCAAATGATAATCAAACGAATGATGATATTCTAAATAATAATCAA ACGAATGATGATATCCTAAATAATAATCAAATGAATGATGAATCTTATGATATAGTGGCA ACTAAAAAAAAAAAACTTCCTATGTATGTTATTGGATATTCGATGGGGGGAAATATTGCT TTAAGAATGTTACAAGTATTAAATAAAGAAAAAGGATATAACATTAATACTGGAGAGTCA GATAACTATAAAAAATGTAAAGCCATATTAGACAATTCTAATCATATTAATGAAATTGAT AATGATATGAATAATTCTAAAAATGACGATCCAGGTACTTCTAGTGCTGGTACCTCTGCT ACGGCAAATGCTAGTACTAGTGACAAACATGTAGAATACGATAATTATTTAGATAAATTC AATATTAAAGGTTGTATATCTTTATCTAGTATGATTACATTAAATGAAACGCGAAATGTT GGAAATATATTAATTAAGTATTTGTATTTACCTGTAACAAGCTTACTGTCTCGTGTCGCG CCTAATGCAAAATTCCCGTCAGATCCAGATTACAAGCAGTTCGAATATATTAATAATACA TATAGATATGATAAATTTAGAAATCCTGATGAAACAAAATTTAAATATGTATATGAACTT CTAAAAGCAACAGTCGACGTGAATTATAATATTAATTATATGCCAAAAGATATTCCTTTA TTATTTCTTCATTCATCAGATGATAGTGTTTGTCATTATCAAGGGACTGTTTCGTTTCAT AGTAAAGCAAAAGTTGAAACAAAAAATATATATATTTTTGATAAGCTGGATCATGCTATA ACGGCAGCACCAGGAAATGAAGAAGTTTTAAACTTAATTATTAATTGGATTAATAATTTA AGAATGAATGATGGAGATAAAATAAAACATGAAATAGAAGACAAAAAAAAAAATGAAATA TAA
  • Download Fasta

  • Fasta :-

    MEGIELNNDELRSTTISKLDGDPKIGWICNKKGLLLKTYGWLVKNAAGIILLIHGFRVHT RLTFMRINLQMPNNNEDIVVDTNNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQAWNNV RGEFSSFDDLVDDVIQYMNQIQDEISNDNQTNDDILNNNQTNDDILNNNQMNDESYDIVA TKKKKLPMYVIGYSMGGNIALRMLQVLNKEKGYNINTGESDNYKKCKAILDNSNHINEID NDMNNSKNDDPGTSSAGTSATANASTSDKHVEYDNYLDKFNIKGCISLSSMITLNETRNV GNILIKYLYLPVTSLLSRVAPNAKFPSDPDYKQFEYINNTYRYDKFRNPDETKFKYVYEL LKATVDVNYNINYMPKDIPLLFLHSSDDSVCHYQGTVSFHSKAKVETKNIYIFDKLDHAI TAAPGNEEVLNLIINWINNLRMNDGDKIKHEIEDKKKNEI

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_073140017 SSTTISKLDG0.994unsp

PCHAS_073140      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India