PCHAS_0800300 | lysophospholipase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0800300OTHER0.9997190.0000600.000221
No Results

  • Fasta :-

    >PCHAS_0800300 MEEIELNNGELRSTTLSKLDGDPKTGWLCNKNGLLLKTYRWLADNAVGIILLIHGFRTHT RLAFMRINLRMPNNNEGLIVDTNNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQSQKNV KGDFSSYDDLVDDVLQYMNQIQDEISNDNQMNDESYDILTTKKKNLPMYVIGYSIGGNIA LRILQLLNKEKGNNINVGESDNNKKCNIMLDNSTNTNKIGKDMNNSNDYGSDNSCDSTSA TTNAIVNASDKHEGCNNCLDKFNIKGCITISGMIRIKSRLDPGNKSLKYFYLPLANFLSF VLPHVRIFSKSYKKSDYAANVSKYDKFRNHSGIKFKYIAEIIKATTALDYNINYMPKDIP LLFVHSKDDRVCSYEWTALFHNKVKVDKKDLHPVDGMGHATTIEPGNEDILKKIIDWIYD LRRNDEDEIEDG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0800300.fa Sequence name : PCHAS_0800300 Sequence length : 432 VALUES OF COMPUTED PARAMETERS Coef20 : 3.542 CoefTot : 0.000 ChDiff : -5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.182 1.359 0.065 0.601 MesoH : -1.023 0.031 -0.478 0.102 MuHd_075 : 24.219 16.138 6.522 5.601 MuHd_095 : 11.663 9.038 4.203 1.590 MuHd_100 : 3.200 4.519 1.420 0.331 MuHd_105 : 12.451 3.809 2.827 2.129 Hmax_075 : -7.233 2.100 -4.182 1.528 Hmax_095 : -3.800 5.300 -2.467 1.295 Hmax_100 : -7.900 -1.400 -3.716 0.840 Hmax_105 : -2.500 1.300 -3.456 1.190 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9349 0.0651 DFMC : 0.9541 0.0459
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 432 PCHAS_0800300 MEEIELNNGELRSTTLSKLDGDPKTGWLCNKNGLLLKTYRWLADNAVGIILLIHGFRTHTRLAFMRINLRMPNNNEGLIV 80 DTNNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQSQKNVKGDFSSYDDLVDDVLQYMNQIQDEISNDNQMNDESYDILT 160 TKKKNLPMYVIGYSIGGNIALRILQLLNKEKGNNINVGESDNNKKCNIMLDNSTNTNKIGKDMNNSNDYGSDNSCDSTSA 240 TTNAIVNASDKHEGCNNCLDKFNIKGCITISGMIRIKSRLDPGNKSLKYFYLPLANFLSFVLPHVRIFSKSYKKSDYAAN 320 VSKYDKFRNHSGIKFKYIAEIIKATTALDYNINYMPKDIPLLFVHSKDDRVCSYEWTALFHNKVKVDKKDLHPVDGMGHA 400 TTIEPGNEDILKKIIDWIYDLRRNDEDEIEDG 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0800300 12 LNNGELR|ST 0.124 . PCHAS_0800300 18 RSTTLSK|LD 0.068 . PCHAS_0800300 24 KLDGDPK|TG 0.057 . PCHAS_0800300 31 TGWLCNK|NG 0.055 . PCHAS_0800300 37 KNGLLLK|TY 0.058 . PCHAS_0800300 40 LLLKTYR|WL 0.091 . PCHAS_0800300 57 LLIHGFR|TH 0.075 . PCHAS_0800300 61 GFRTHTR|LA 0.107 . PCHAS_0800300 66 TRLAFMR|IN 0.100 . PCHAS_0800300 70 FMRINLR|MP 0.075 . PCHAS_0800300 89 NNYYIYK|DS 0.074 . PCHAS_0800300 95 KDSWIEK|FN 0.080 . PCHAS_0800300 118 GESQSQK|NV 0.096 . PCHAS_0800300 121 QSQKNVK|GD 0.077 . PCHAS_0800300 162 YDILTTK|KK 0.057 . PCHAS_0800300 163 DILTTKK|KN 0.073 . PCHAS_0800300 164 ILTTKKK|NL 0.091 . PCHAS_0800300 182 GGNIALR|IL 0.076 . PCHAS_0800300 189 ILQLLNK|EK 0.065 . PCHAS_0800300 191 QLLNKEK|GN 0.069 . PCHAS_0800300 204 GESDNNK|KC 0.070 . PCHAS_0800300 205 ESDNNKK|CN 0.087 . PCHAS_0800300 218 NSTNTNK|IG 0.060 . PCHAS_0800300 221 NTNKIGK|DM 0.075 . PCHAS_0800300 251 IVNASDK|HE 0.066 . PCHAS_0800300 261 CNNCLDK|FN 0.089 . PCHAS_0800300 265 LDKFNIK|GC 0.069 . PCHAS_0800300 275 TISGMIR|IK 0.107 . PCHAS_0800300 277 SGMIRIK|SR 0.071 . PCHAS_0800300 279 MIRIKSR|LD 0.083 . PCHAS_0800300 285 RLDPGNK|SL 0.061 . PCHAS_0800300 288 PGNKSLK|YF 0.065 . PCHAS_0800300 306 FVLPHVR|IF 0.081 . PCHAS_0800300 310 HVRIFSK|SY 0.090 . PCHAS_0800300 313 IFSKSYK|KS 0.084 . PCHAS_0800300 314 FSKSYKK|SD 0.132 . PCHAS_0800300 323 YAANVSK|YD 0.065 . PCHAS_0800300 326 NVSKYDK|FR 0.071 . PCHAS_0800300 328 SKYDKFR|NH 0.121 . PCHAS_0800300 334 RNHSGIK|FK 0.073 . PCHAS_0800300 336 HSGIKFK|YI 0.111 . PCHAS_0800300 343 YIAEIIK|AT 0.065 . PCHAS_0800300 357 NINYMPK|DI 0.075 . PCHAS_0800300 367 LLFVHSK|DD 0.070 . PCHAS_0800300 370 VHSKDDR|VC 0.092 . PCHAS_0800300 383 TALFHNK|VK 0.067 . PCHAS_0800300 385 LFHNKVK|VD 0.065 . PCHAS_0800300 388 NKVKVDK|KD 0.062 . PCHAS_0800300 389 KVKVDKK|DL 0.186 . PCHAS_0800300 412 GNEDILK|KI 0.070 . PCHAS_0800300 413 NEDILKK|II 0.124 . PCHAS_0800300 422 DWIYDLR|RN 0.074 . PCHAS_0800300 423 WIYDLRR|ND 0.143 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0800300 ATGGAAGAAATTGAATTGAACAATGGTGAATTAAGAAGTACTACACTAAGTAAATTAGAT GGCGATCCTAAGACAGGTTGGTTATGTAATAAAAATGGTTTACTTTTAAAAACATATAGA TGGCTAGCTGACAATGCTGTAGGAATTATATTGTTAATACATGGATTTAGAACTCATACA CGATTAGCTTTTATGAGAATAAATTTACGAATGCCAAATAACAATGAAGGCTTAATAGTA GACACTAATAATTACTATATTTACAAAGATAGTTGGATTGAAAAATTTAATCAAAATGGT TATTCAGTATATGCACTCGATTTACAAGGACATGGTGAATCACAATCACAGAAAAATGTA AAAGGCGATTTTAGTTCTTATGATGATCTAGTTGATGATGTATTACAATATATGAATCAA ATTCAAGATGAAATCTCAAATGATAATCAAATGAATGATGAATCTTATGATATACTGACA ACTAAAAAAAAAAACCTTCCTATGTATGTTATTGGGTATTCGATTGGAGGGAATATTGCT TTAAGAATATTACAATTATTAAATAAAGAAAAAGGAAATAACATTAATGTTGGAGAATCA GATAACAATAAAAAATGTAACATCATGTTAGACAATTCTACTAATACTAATAAAATTGGC AAGGATATGAATAATTCTAATGATTATGGTTCCGATAATTCCTGCGATAGTACCTCTGCT ACTACAAATGCTATTGTTAACGCCAGTGATAAACATGAAGGATGCAATAATTGTTTAGAT AAATTCAATATTAAAGGATGCATAACTATATCTGGTATGATAAGAATAAAATCAAGATTG GATCCTGGAAACAAATCACTTAAGTATTTTTATTTACCTCTAGCAAACTTCCTGTCTTTT GTCTTACCTCATGTACGAATTTTTTCAAAATCATATAAAAAGTCCGATTATGCTGCTAAT GTAAGTAAATATGATAAATTTAGAAATCATAGTGGAATAAAATTTAAATACATAGCTGAA ATTATAAAAGCGACAACTGCATTGGATTATAATATTAATTATATGCCAAAAGATATTCCT TTATTATTTGTGCATTCAAAAGATGATAGAGTTTGTTCTTATGAATGGACCGCTTTGTTT CATAATAAAGTGAAAGTTGATAAAAAAGATTTACATCCTGTTGATGGTATGGGCCATGCT ACAACGATAGAGCCAGGAAATGAAGACATTTTAAAAAAAATTATTGATTGGATTTATGAT TTAAGAAGGAATGACGAAGACGAAATAGAAGATGGATAA
  • Download Fasta

  • Fasta :-

    MEEIELNNGELRSTTLSKLDGDPKTGWLCNKNGLLLKTYRWLADNAVGIILLIHGFRTHT RLAFMRINLRMPNNNEGLIVDTNNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQSQKNV KGDFSSYDDLVDDVLQYMNQIQDEISNDNQMNDESYDILTTKKKNLPMYVIGYSIGGNIA LRILQLLNKEKGNNINVGESDNNKKCNIMLDNSTNTNKIGKDMNNSNDYGSDNSCDSTSA TTNAIVNASDKHEGCNNCLDKFNIKGCITISGMIRIKSRLDPGNKSLKYFYLPLANFLSF VLPHVRIFSKSYKKSDYAANVSKYDKFRNHSGIKFKYIAEIIKATTALDYNINYMPKDIP LLFVHSKDDRVCSYEWTALFHNKVKVDKKDLHPVDGMGHATTIEPGNEDILKKIIDWIYD LRRNDEDEIEDG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0800300278 SIRIKSRLDP0.992unspPCHAS_0800300278 SIRIKSRLDP0.992unspPCHAS_0800300278 SIRIKSRLDP0.992unspPCHAS_0800300311 SIFSKSYKKS0.997unspPCHAS_0800300373 SDRVCSYEWT0.994unspPCHAS_080030017 SSTTLSKLDG0.995unspPCHAS_0800300125 SKGDFSSYDD0.991unsp

PCHAS_080030      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India