PCHAS_0807700 | 26S proteasome non-ATPase regulatory subunit 9, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0807700OTHER0.9999720.0000150.000013
No Results

  • Fasta :-

    >PCHAS_0807700 MEINEFNELVKQRECIENEIKENLEFLESPENKNIGMHGKLIDPEGFPRNDIDIYKIRIA RNKIICLKNDYLNINKKIEEYLHEIHSSKPAIRVERNKGNYSNTNEDTTSINIKPITNKE DIEYAKNNIFALVDEIVENSPSHKAGIKLNDQIFEFADIKKEGNNIDMNNTDNIFKKISD FMKQNPSKIQLKILRQEAIYHYNIFPDKTPTGLYIGCHLAPITKLSS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0807700.fa Sequence name : PCHAS_0807700 Sequence length : 227 VALUES OF COMPUTED PARAMETERS Coef20 : 3.275 CoefTot : 0.000 ChDiff : -4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.653 0.641 -0.013 0.378 MesoH : -1.671 -0.438 -0.755 0.008 MuHd_075 : 32.348 19.940 9.644 5.743 MuHd_095 : 6.981 2.851 1.835 0.834 MuHd_100 : 7.242 11.923 3.182 3.031 MuHd_105 : 21.830 21.092 8.250 5.310 Hmax_075 : -5.483 6.300 -1.864 2.042 Hmax_095 : -13.300 -0.350 -4.803 0.166 Hmax_100 : -9.200 3.800 -3.162 1.100 Hmax_105 : -5.200 11.800 -1.478 2.960 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9211 0.0789 DFMC : 0.8813 0.1187
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 227 PCHAS_0807700 MEINEFNELVKQRECIENEIKENLEFLESPENKNIGMHGKLIDPEGFPRNDIDIYKIRIARNKIICLKNDYLNINKKIEE 80 YLHEIHSSKPAIRVERNKGNYSNTNEDTTSINIKPITNKEDIEYAKNNIFALVDEIVENSPSHKAGIKLNDQIFEFADIK 160 KEGNNIDMNNTDNIFKKISDFMKQNPSKIQLKILRQEAIYHYNIFPDKTPTGLYIGCHLAPITKLSS 240 ................................................................................ 80 ................................................................................ 160 ................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0807700 11 EFNELVK|QR 0.073 . PCHAS_0807700 13 NELVKQR|EC 0.100 . PCHAS_0807700 21 CIENEIK|EN 0.058 . PCHAS_0807700 33 LESPENK|NI 0.095 . PCHAS_0807700 40 NIGMHGK|LI 0.085 . PCHAS_0807700 49 DPEGFPR|ND 0.091 . PCHAS_0807700 56 NDIDIYK|IR 0.059 . PCHAS_0807700 58 IDIYKIR|IA 0.125 . PCHAS_0807700 61 YKIRIAR|NK 0.235 . PCHAS_0807700 63 IRIARNK|II 0.074 . PCHAS_0807700 68 NKIICLK|ND 0.057 . PCHAS_0807700 76 DYLNINK|KI 0.063 . PCHAS_0807700 77 YLNINKK|IE 0.092 . PCHAS_0807700 89 HEIHSSK|PA 0.085 . PCHAS_0807700 93 SSKPAIR|VE 0.091 . PCHAS_0807700 96 PAIRVER|NK 0.275 . PCHAS_0807700 98 IRVERNK|GN 0.071 . PCHAS_0807700 114 TTSINIK|PI 0.099 . PCHAS_0807700 119 IKPITNK|ED 0.059 . PCHAS_0807700 126 EDIEYAK|NN 0.067 . PCHAS_0807700 144 ENSPSHK|AG 0.079 . PCHAS_0807700 148 SHKAGIK|LN 0.069 . PCHAS_0807700 160 FEFADIK|KE 0.062 . PCHAS_0807700 161 EFADIKK|EG 0.084 . PCHAS_0807700 176 NTDNIFK|KI 0.069 . PCHAS_0807700 177 TDNIFKK|IS 0.141 . PCHAS_0807700 183 KISDFMK|QN 0.075 . PCHAS_0807700 188 MKQNPSK|IQ 0.081 . PCHAS_0807700 192 PSKIQLK|IL 0.069 . PCHAS_0807700 195 IQLKILR|QE 0.075 . PCHAS_0807700 208 YNIFPDK|TP 0.057 . PCHAS_0807700 224 HLAPITK|LS 0.064 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0807700 ATGGAGATAAACGAATTTAACGAACTTGTCAAACAACGGGAATGTATAGAAAATGAGATA AAAGAGAATCTTGAATTTTTAGAAAGTCCTGAAAATAAAAATATTGGAATGCATGGAAAA TTAATAGATCCAGAAGGGTTTCCACGTAATGATATAGATATATATAAAATTCGAATTGCT AGGAATAAAATAATATGTCTAAAAAATGACTATTTAAATATAAATAAGAAAATAGAAGAA TATTTACATGAAATACATAGCTCAAAACCCGCTATAAGAGTAGAAAGAAATAAAGGAAAT TATTCAAACACCAATGAGGATACAACTAGTATTAATATTAAACCGATAACTAACAAAGAG GATATTGAATATGCAAAAAATAATATTTTTGCTTTAGTAGATGAAATTGTAGAAAATTCT CCATCCCATAAAGCGGGTATAAAACTTAATGATCAAATTTTCGAATTTGCAGATATAAAA AAAGAAGGGAATAATATTGATATGAATAATACAGATAATATATTTAAAAAAATATCCGAT TTTATGAAACAAAATCCGTCAAAAATTCAACTCAAAATTCTAAGACAGGAAGCTATATAT CATTATAATATTTTTCCTGATAAAACACCTACAGGCTTATATATTGGATGTCATTTAGCA CCGATAACAAAATTATCAAGTTAG
  • Download Fasta

  • Fasta :-

    MEINEFNELVKQRECIENEIKENLEFLESPENKNIGMHGKLIDPEGFPRNDIDIYKIRIA RNKIICLKNDYLNINKKIEEYLHEIHSSKPAIRVERNKGNYSNTNEDTTSINIKPITNKE DIEYAKNNIFALVDEIVENSPSHKAGIKLNDQIFEFADIKKEGNNIDMNNTDNIFKKISD FMKQNPSKIQLKILRQEAIYHYNIFPDKTPTGLYIGCHLAPITKLSS

    No Results
No Results
No Results
No Results

PCHAS_080770      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India