PCHAS_0824300 | OTU domain-containing protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:  protein deubiquitination      

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0824300OTHER0.9991970.0001080.000695
No Results

  • Fasta :-

    >PCHAS_0824300 MTNFLTTKWKKIKYKYMATKLKIAKRDENDDKIEQKINNNLNVNNFEYILKSIQESKHKD RIKKCNSLDRYISFLLGKNKLNKENYKYKRNILQIHLLAIGCELVKIIGDGNCLFRSISY NLFGKQIYHMYIRQACVDYMLNYKDEYSIYFEEGDFSKYIKNMLNDGCWGDELCIKAIAD TFDCVVYIITSNPDQWLLKYEPKYKTNHQPKKCVFLAYSCPIHYDSLKLIKL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0824300.fa Sequence name : PCHAS_0824300 Sequence length : 232 VALUES OF COMPUTED PARAMETERS Coef20 : 4.101 CoefTot : -0.691 ChDiff : 13 ZoneTo : 26 KR : 9 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.576 1.865 0.144 0.612 MesoH : -1.087 0.116 -0.469 0.170 MuHd_075 : 33.928 17.519 9.569 6.898 MuHd_095 : 29.974 14.485 7.656 6.759 MuHd_100 : 22.572 12.109 5.296 5.094 MuHd_105 : 16.931 12.843 4.818 3.574 Hmax_075 : -1.983 5.717 -3.619 1.797 Hmax_095 : 1.400 6.900 -2.131 2.940 Hmax_100 : -8.300 3.900 -5.044 1.490 Hmax_105 : -0.233 5.483 0.195 4.048 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4564 0.5436 DFMC : 0.7769 0.2231
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 232 PCHAS_0824300 MTNFLTTKWKKIKYKYMATKLKIAKRDENDDKIEQKINNNLNVNNFEYILKSIQESKHKDRIKKCNSLDRYISFLLGKNK 80 LNKENYKYKRNILQIHLLAIGCELVKIIGDGNCLFRSISYNLFGKQIYHMYIRQACVDYMLNYKDEYSIYFEEGDFSKYI 160 KNMLNDGCWGDELCIKAIADTFDCVVYIITSNPDQWLLKYEPKYKTNHQPKKCVFLAYSCPIHYDSLKLIKL 240 ................................................................................ 80 ................................................................................ 160 ........................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0824300 8 TNFLTTK|WK 0.067 . PCHAS_0824300 10 FLTTKWK|KI 0.070 . PCHAS_0824300 11 LTTKWKK|IK 0.102 . PCHAS_0824300 13 TKWKKIK|YK 0.081 . PCHAS_0824300 15 WKKIKYK|YM 0.097 . PCHAS_0824300 20 YKYMATK|LK 0.069 . PCHAS_0824300 22 YMATKLK|IA 0.073 . PCHAS_0824300 25 TKLKIAK|RD 0.063 . PCHAS_0824300 26 KLKIAKR|DE 0.187 . PCHAS_0824300 32 RDENDDK|IE 0.066 . PCHAS_0824300 36 DDKIEQK|IN 0.061 . PCHAS_0824300 51 NFEYILK|SI 0.073 . PCHAS_0824300 57 KSIQESK|HK 0.069 . PCHAS_0824300 59 IQESKHK|DR 0.072 . PCHAS_0824300 61 ESKHKDR|IK 0.083 . PCHAS_0824300 63 KHKDRIK|KC 0.065 . PCHAS_0824300 64 HKDRIKK|CN 0.266 . PCHAS_0824300 70 KCNSLDR|YI 0.121 . PCHAS_0824300 78 ISFLLGK|NK 0.062 . PCHAS_0824300 80 FLLGKNK|LN 0.058 . PCHAS_0824300 83 GKNKLNK|EN 0.073 . PCHAS_0824300 87 LNKENYK|YK 0.075 . PCHAS_0824300 89 KENYKYK|RN 0.075 . PCHAS_0824300 90 ENYKYKR|NI 0.195 . PCHAS_0824300 106 IGCELVK|II 0.073 . PCHAS_0824300 116 DGNCLFR|SI 0.192 . PCHAS_0824300 125 SYNLFGK|QI 0.071 . PCHAS_0824300 133 IYHMYIR|QA 0.094 . PCHAS_0824300 144 DYMLNYK|DE 0.062 . PCHAS_0824300 158 EEGDFSK|YI 0.074 . PCHAS_0824300 161 DFSKYIK|NM 0.063 . PCHAS_0824300 176 GDELCIK|AI 0.072 . PCHAS_0824300 199 PDQWLLK|YE 0.062 . PCHAS_0824300 203 LLKYEPK|YK 0.073 . PCHAS_0824300 205 KYEPKYK|TN 0.064 . PCHAS_0824300 211 KTNHQPK|KC 0.063 . PCHAS_0824300 212 TNHQPKK|CV 0.199 . PCHAS_0824300 228 IHYDSLK|LI 0.062 . PCHAS_0824300 231 DSLKLIK|L- 0.060 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0824300 ATGACCAACTTCTTGACAACAAAATGGAAAAAAATAAAATACAAGTATATGGCAACGAAA TTGAAAATTGCAAAACGAGATGAAAATGATGATAAAATAGAACAAAAAATAAATAATAAT TTAAATGTAAATAATTTTGAATATATATTAAAATCTATACAAGAATCAAAACATAAGGAT AGAATAAAAAAATGTAATAGTCTAGATAGATATATATCATTTTTATTAGGAAAAAATAAA TTAAATAAAGAAAATTATAAATATAAAAGAAATATATTACAAATTCATTTATTAGCTATA GGTTGTGAATTAGTTAAAATAATAGGAGATGGAAATTGTTTATTTCGATCTATTTCATAT AATTTATTTGGAAAACAAATATATCATATGTATATCCGTCAAGCATGTGTTGATTATATG TTAAACTATAAAGATGAATATTCTATATATTTTGAAGAAGGAGATTTTAGTAAATATATA AAAAATATGTTAAATGATGGATGTTGGGGTGATGAACTATGTATTAAAGCCATAGCTGAT ACTTTCGATTGTGTTGTATATATAATAACATCAAATCCCGATCAATGGTTATTAAAATAT GAACCGAAATATAAAACTAATCATCAACCCAAGAAATGCGTTTTTTTAGCTTATTCATGT CCTATTCATTATGACTCGCTCAAATTAATCAAATTGTGA
  • Download Fasta

  • Fasta :-

    MTNFLTTKWKKIKYKYMATKLKIAKRDENDDKIEQKINNNLNVNNFEYILKSIQESKHKD RIKKCNSLDRYISFLLGKNKLNKENYKYKRNILQIHLLAIGCELVKIIGDGNCLFRSISY NLFGKQIYHMYIRQACVDYMLNYKDEYSIYFEEGDFSKYIKNMLNDGCWGDELCIKAIAD TFDCVVYIITSNPDQWLLKYEPKYKTNHQPKKCVFLAYSCPIHYDSLKLIKL

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PCHAS_082430      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India