PCHAS_0832900 | proteasome subunit beta type-6, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0832900OTHER0.9999890.0000090.000002
No Results

  • Fasta :-

    >PCHAS_0832900 MEVEPMKMYKINQDSINNEYDIRTPISDGTTIIGIIYEHGVMLACDTRTSSGTFVSNKCS RKINRINENIYVCRSGASAHSQKVIEVIKHYCASMKSENRKKGRFHEDEIITDDINDEEI DVNQINNINNNSVIAQNKYYYDDKFMDYNPLVENVAYITKKLIYANNNFLSCGLIFGGYD KVKKQQLYSVNLNGSIIQKHDYAVSGSGSIYIQSYLQDKYKQNMTKKECFDLILNCVKYA IYNDNSSGGIIRILNITKLFVEEYTVTNTQIHFDY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0832900.fa Sequence name : PCHAS_0832900 Sequence length : 275 VALUES OF COMPUTED PARAMETERS Coef20 : 2.940 CoefTot : 0.000 ChDiff : -2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.271 0.161 0.577 MesoH : -0.925 -0.040 -0.447 0.142 MuHd_075 : 19.407 15.548 5.719 3.622 MuHd_095 : 25.940 13.652 7.245 4.339 MuHd_100 : 25.895 8.997 6.624 4.156 MuHd_105 : 23.392 6.622 6.158 3.702 Hmax_075 : 1.750 2.333 -2.710 1.307 Hmax_095 : 0.600 5.000 -2.335 2.380 Hmax_100 : 4.800 1.100 -1.701 2.100 Hmax_105 : -4.550 2.683 -3.283 2.112 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9692 0.0308 DFMC : 0.9664 0.0336
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 275 PCHAS_0832900 MEVEPMKMYKINQDSINNEYDIRTPISDGTTIIGIIYEHGVMLACDTRTSSGTFVSNKCSRKINRINENIYVCRSGASAH 80 SQKVIEVIKHYCASMKSENRKKGRFHEDEIITDDINDEEIDVNQINNINNNSVIAQNKYYYDDKFMDYNPLVENVAYITK 160 KLIYANNNFLSCGLIFGGYDKVKKQQLYSVNLNGSIIQKHDYAVSGSGSIYIQSYLQDKYKQNMTKKECFDLILNCVKYA 240 IYNDNSSGGIIRILNITKLFVEEYTVTNTQIHFDY 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0832900 7 MEVEPMK|MY 0.070 . PCHAS_0832900 10 EPMKMYK|IN 0.081 . PCHAS_0832900 23 NNEYDIR|TP 0.077 . PCHAS_0832900 48 MLACDTR|TS 0.092 . PCHAS_0832900 58 GTFVSNK|CS 0.070 . PCHAS_0832900 61 VSNKCSR|KI 0.110 . PCHAS_0832900 62 SNKCSRK|IN 0.106 . PCHAS_0832900 65 CSRKINR|IN 0.114 . PCHAS_0832900 74 ENIYVCR|SG 0.119 . PCHAS_0832900 83 ASAHSQK|VI 0.082 . PCHAS_0832900 89 KVIEVIK|HY 0.071 . PCHAS_0832900 96 HYCASMK|SE 0.083 . PCHAS_0832900 100 SMKSENR|KK 0.088 . PCHAS_0832900 101 MKSENRK|KG 0.106 . PCHAS_0832900 102 KSENRKK|GR 0.112 . PCHAS_0832900 104 ENRKKGR|FH 0.203 . PCHAS_0832900 138 SVIAQNK|YY 0.073 . PCHAS_0832900 144 KYYYDDK|FM 0.066 . PCHAS_0832900 160 NVAYITK|KL 0.064 . PCHAS_0832900 161 VAYITKK|LI 0.108 . PCHAS_0832900 181 IFGGYDK|VK 0.060 . PCHAS_0832900 183 GGYDKVK|KQ 0.060 . PCHAS_0832900 184 GYDKVKK|QQ 0.081 . PCHAS_0832900 199 NGSIIQK|HD 0.072 . PCHAS_0832900 219 QSYLQDK|YK 0.066 . PCHAS_0832900 221 YLQDKYK|QN 0.079 . PCHAS_0832900 226 YKQNMTK|KE 0.061 . PCHAS_0832900 227 KQNMTKK|EC 0.124 . PCHAS_0832900 238 LILNCVK|YA 0.066 . PCHAS_0832900 252 SSGGIIR|IL 0.084 . PCHAS_0832900 258 RILNITK|LF 0.057 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0832900 ATGGAGGTAGAACCCATGAAGATGTACAAAATAAACCAAGACTCAATTAATAATGAATAT GATATTAGGACCCCTATATCTGATGGTACAACAATTATCGGGATAATATATGAACATGGT GTTATGCTAGCTTGTGATACTCGAACATCATCTGGAACTTTTGTTAGTAATAAGTGTTCA AGAAAAATAAATAGAATCAATGAAAATATTTATGTATGTAGAAGTGGTGCATCTGCACAT AGCCAAAAAGTAATTGAAGTAATAAAACATTATTGTGCATCTATGAAAAGTGAAAATCGT AAAAAAGGTCGATTCCATGAAGATGAAATCATAACAGATGATATAAATGATGAAGAAATT GATGTTAACCAAATTAATAATATAAATAATAATAGTGTAATAGCTCAAAATAAGTATTAC TATGATGATAAATTTATGGATTATAATCCATTAGTAGAAAATGTTGCATATATAACAAAA AAACTTATATATGCAAATAATAATTTTTTATCGTGTGGTTTAATATTTGGTGGTTATGAT AAAGTAAAAAAACAACAATTATATTCTGTTAATTTAAATGGGAGTATAATTCAGAAACAT GATTATGCAGTTAGTGGAAGTGGAAGTATCTATATTCAATCTTATTTACAAGATAAATAT AAACAAAATATGACGAAAAAAGAATGTTTTGATCTCATTCTAAATTGTGTTAAATATGCT ATATATAATGATAATAGTAGTGGTGGTATTATAAGAATTTTAAATATTACAAAACTTTTT GTTGAAGAATATACAGTCACTAACACTCAAATACATTTCGATTACTAA
  • Download Fasta

  • Fasta :-

    MEVEPMKMYKINQDSINNEYDIRTPISDGTTIIGIIYEHGVMLACDTRTSSGTFVSNKCS RKINRINENIYVCRSGASAHSQKVIEVIKHYCASMKSENRKKGRFHEDEIITDDINDEEI DVNQINNINNNSVIAQNKYYYDDKFMDYNPLVENVAYITKKLIYANNNFLSCGLIFGGYD KVKKQQLYSVNLNGSIIQKHDYAVSGSGSIYIQSYLQDKYKQNMTKKECFDLILNCVKYA IYNDNSSGGIIRILNITKLFVEEYTVTNTQIHFDY

  • title: active site
  • coordinates: T30,D46,R48,K62
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_083290081 SASAHSQKVI0.995unsp

PCHAS_083290      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India