PCHAS_0837400 | lysophospholipase, putative

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_0837400OTHER0.9999170.0000400.000043
No Results

  • Fasta :-

    >PCHAS_0837400 MMKEIELNNDESMDKTCNLDGNPMVGWLCNKHGLLLKTYRWLSKNAAGIILLIHGYRFHI RLTFMRTNLKIPNHNESFVVDSNTYYIYKDSWIEKFNQSGYSVYGIDLQGHGESQSWKNV NGDFSRFDDLVDDVIQYMNQIHDEISNENQTDGESYDIVSTKKKRLPMYIIGYSMGANIA LRILQLLNKEKEDKIKTYNSNNYKKCSIMLNNSTDVNEIDNDMHNMNNSKYGDSGTSSGS TSATISAIVSTSDKHEGCYNDLDKFNIKGCASLSGMIRIKSIFNPGNISLKYFYLPIINF LSYILPNLQNLLEPHNNTSGYFSNICKYYIFRNINGKKYKYIYELAKATVTLDRNIKYMP KDVPLLFVHSQDDSICSYERAVAFYNKVNVSKKELYPVDGMDHNITTNPGNEEILKKVID WISDVRSNDEDGKENEL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0837400.fa Sequence name : PCHAS_0837400 Sequence length : 437 VALUES OF COMPUTED PARAMETERS Coef20 : 3.186 CoefTot : -0.113 ChDiff : -5 ZoneTo : 3 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.318 1.224 0.145 0.605 MesoH : -0.340 0.232 -0.322 0.220 MuHd_075 : 25.688 12.097 6.783 3.030 MuHd_095 : 41.194 18.096 10.926 5.666 MuHd_100 : 37.246 14.840 9.040 4.578 MuHd_105 : 23.561 6.658 4.817 1.966 Hmax_075 : -1.400 1.900 -2.087 0.840 Hmax_095 : 10.762 6.738 0.871 2.275 Hmax_100 : 10.300 5.200 -0.811 2.310 Hmax_105 : -1.300 -0.200 -3.389 0.930 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9223 0.0777 DFMC : 0.8341 0.1659
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 437 PCHAS_0837400 MMKEIELNNDESMDKTCNLDGNPMVGWLCNKHGLLLKTYRWLSKNAAGIILLIHGYRFHIRLTFMRTNLKIPNHNESFVV 80 DSNTYYIYKDSWIEKFNQSGYSVYGIDLQGHGESQSWKNVNGDFSRFDDLVDDVIQYMNQIHDEISNENQTDGESYDIVS 160 TKKKRLPMYIIGYSMGANIALRILQLLNKEKEDKIKTYNSNNYKKCSIMLNNSTDVNEIDNDMHNMNNSKYGDSGTSSGS 240 TSATISAIVSTSDKHEGCYNDLDKFNIKGCASLSGMIRIKSIFNPGNISLKYFYLPIINFLSYILPNLQNLLEPHNNTSG 320 YFSNICKYYIFRNINGKKYKYIYELAKATVTLDRNIKYMPKDVPLLFVHSQDDSICSYERAVAFYNKVNVSKKELYPVDG 400 MDHNITTNPGNEEILKKVIDWISDVRSNDEDGKENEL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0837400 3 ----MMK|EI 0.068 . PCHAS_0837400 15 NDESMDK|TC 0.056 . PCHAS_0837400 31 VGWLCNK|HG 0.052 . PCHAS_0837400 37 KHGLLLK|TY 0.057 . PCHAS_0837400 40 LLLKTYR|WL 0.111 . PCHAS_0837400 44 TYRWLSK|NA 0.075 . PCHAS_0837400 57 LLIHGYR|FH 0.089 . PCHAS_0837400 61 GYRFHIR|LT 0.100 . PCHAS_0837400 66 IRLTFMR|TN 0.100 . PCHAS_0837400 70 FMRTNLK|IP 0.058 . PCHAS_0837400 89 NTYYIYK|DS 0.070 . PCHAS_0837400 95 KDSWIEK|FN 0.079 . PCHAS_0837400 118 GESQSWK|NV 0.099 . PCHAS_0837400 126 VNGDFSR|FD 0.102 . PCHAS_0837400 162 YDIVSTK|KK 0.061 . PCHAS_0837400 163 DIVSTKK|KR 0.070 . PCHAS_0837400 164 IVSTKKK|RL 0.116 . PCHAS_0837400 165 VSTKKKR|LP 0.163 . PCHAS_0837400 182 GANIALR|IL 0.079 . PCHAS_0837400 189 ILQLLNK|EK 0.070 . PCHAS_0837400 191 QLLNKEK|ED 0.059 . PCHAS_0837400 194 NKEKEDK|IK 0.060 . PCHAS_0837400 196 EKEDKIK|TY 0.065 . PCHAS_0837400 204 YNSNNYK|KC 0.079 . PCHAS_0837400 205 NSNNYKK|CS 0.112 . PCHAS_0837400 230 HNMNNSK|YG 0.073 . PCHAS_0837400 254 IVSTSDK|HE 0.070 . PCHAS_0837400 264 CYNDLDK|FN 0.075 . PCHAS_0837400 268 LDKFNIK|GC 0.062 . PCHAS_0837400 278 SLSGMIR|IK 0.110 . PCHAS_0837400 280 SGMIRIK|SI 0.094 . PCHAS_0837400 291 PGNISLK|YF 0.063 . PCHAS_0837400 327 YFSNICK|YY 0.064 . PCHAS_0837400 332 CKYYIFR|NI 0.086 . PCHAS_0837400 337 FRNINGK|KY 0.067 . PCHAS_0837400 338 RNINGKK|YK 0.124 . PCHAS_0837400 340 INGKKYK|YI 0.090 . PCHAS_0837400 347 YIYELAK|AT 0.067 . PCHAS_0837400 354 ATVTLDR|NI 0.090 . PCHAS_0837400 357 TLDRNIK|YM 0.109 . PCHAS_0837400 361 NIKYMPK|DV 0.078 . PCHAS_0837400 380 SICSYER|AV 0.096 . PCHAS_0837400 387 AVAFYNK|VN 0.056 . PCHAS_0837400 392 NKVNVSK|KE 0.060 . PCHAS_0837400 393 KVNVSKK|EL 0.152 . PCHAS_0837400 416 GNEEILK|KV 0.079 . PCHAS_0837400 417 NEEILKK|VI 0.111 . PCHAS_0837400 426 DWISDVR|SN 0.104 . PCHAS_0837400 433 SNDEDGK|EN 0.064 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0837400 ATGATGAAAGAAATTGAATTGAATAATGATGAATCAATGGATAAAACATGTAATTTAGAT GGTAATCCTATGGTAGGCTGGTTATGCAATAAACATGGTTTACTTTTAAAAACATATAGA TGGCTATCTAAAAATGCTGCAGGAATTATATTGTTAATACATGGATACAGATTTCATATT CGATTAACTTTTATGAGAACAAATTTAAAAATTCCAAATCACAATGAAAGCTTCGTAGTA GATAGTAATACTTATTATATTTATAAAGATAGTTGGATTGAAAAATTTAATCAAAGTGGT TATTCAGTATATGGAATAGATTTGCAAGGACATGGGGAATCACAATCATGGAAAAATGTA AACGGTGATTTTAGTCGTTTTGATGATTTAGTTGATGATGTAATACAATATATGAATCAA ATTCACGATGAAATTTCGAATGAAAATCAAACGGATGGTGAATCTTATGATATAGTGTCA ACTAAAAAAAAAAGACTTCCTATGTATATTATTGGGTATTCAATGGGAGCAAATATTGCT TTAAGAATATTACAATTATTAAATAAAGAAAAAGAAGATAAAATTAAGACGTATAATTCA AATAACTATAAAAAATGTAGCATCATGCTAAACAATTCTACTGATGTTAATGAAATTGAT AATGATATGCATAATATGAATAATTCTAAATATGGCGATTCAGGTACTTCTAGTGGTAGT ACCTCTGCTACGATAAGTGCTATTGTTAGTACTAGTGATAAACATGAAGGATGCTATAAC GATTTAGATAAATTCAATATTAAAGGTTGCGCATCTTTATCTGGCATGATAAGAATAAAA TCAATATTTAATCCTGGAAATATATCGCTAAAGTATTTTTATTTACCTATAATAAACTTC CTGTCTTATATCTTACCTAATTTACAAAATTTGTTAGAACCACATAATAACACGTCCGGA TATTTTTCTAATATATGTAAATATTATATATTTCGAAATATTAATGGAAAAAAATATAAA TATATATATGAACTTGCAAAGGCAACTGTCACATTGGATCGTAATATTAAATATATGCCA AAAGATGTTCCTTTATTATTTGTGCATTCACAAGACGATAGTATTTGTTCTTATGAACGG GCAGTTGCGTTTTATAATAAAGTAAATGTTAGTAAAAAAGAATTATATCCTGTTGATGGT ATGGATCATAATATAACGACAAACCCAGGAAATGAAGAAATTTTAAAAAAAGTTATTGAT TGGATTTCTGATGTAAGAAGCAACGATGAAGATGGAAAGGAAAATGAACTATAA
  • Download Fasta

  • Fasta :-

    MMKEIELNNDESMDKTCNLDGNPMVGWLCNKHGLLLKTYRWLSKNAAGIILLIHGYRFHI RLTFMRTNLKIPNHNESFVVDSNTYYIYKDSWIEKFNQSGYSVYGIDLQGHGESQSWKNV NGDFSRFDDLVDDVIQYMNQIHDEISNENQTDGESYDIVSTKKKRLPMYIIGYSMGANIA LRILQLLNKEKEDKIKTYNSNNYKKCSIMLNNSTDVNEIDNDMHNMNNSKYGDSGTSSGS TSATISAIVSTSDKHEGCYNDLDKFNIKGCASLSGMIRIKSIFNPGNISLKYFYLPIINF LSYILPNLQNLLEPHNNTSGYFSNICKYYIFRNINGKKYKYIYELAKATVTLDRNIKYMP KDVPLLFVHSQDDSICSYERAVAFYNKVNVSKKELYPVDGMDHNITTNPGNEEILKKVID WISDVRSNDEDGKENEL

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_0837400391 SKVNVSKKEL0.994unsp

PCHAS_083740      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India