PCHAS_0911900 | chabaupain 2

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0911900OTHER0.9997780.0000540.000168
No Results

  • Fasta :-

    >PCHAS_0911900 MNYHSSHIRPEEEMFVDKGIQNARLRKKNQMLIVTLAIVLSMFGFTVIYFNKTNKSSFNN LNVQNYSNDDYLINYLLKSKVVKKFMGSKIEELIVESEKNAKNANIVKNANDEHNKNYNK KTPLFKKNNDGKKFSANLYDMKFIMSNLESVNIFYNFMKKFNKQYNSAEEMQERFYIFTE NLKKVEKHNKEKKYMYKKGINPFSDMRPEEFKMRYLNSKLSESTIIDLRHLIPYSAAISK YKSPTDKVNYKSFDWREHNAIIAVKDQKRCASCWAFATAGVIEAQYAIRQNKKISLSEQQ LVDCSQNNDGCEGGILPYAFEDLIDMGGLCEDKYYPYVADVPELCEINKCKEKYTAIEYA LVPYDNYKEAIQYLGPLTIAVGASEDFQDYDGGIFDGECTGFANHAVILVGYGVESVFDE SLKKNVDQYYYIIRNSWSDAWGEEGYMRLKTDESGALRNCVLVQAYVPIIE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0911900.fa Sequence name : PCHAS_0911900 Sequence length : 471 VALUES OF COMPUTED PARAMETERS Coef20 : 3.021 CoefTot : -0.663 ChDiff : 0 ZoneTo : 10 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.482 2.600 0.475 0.862 MesoH : -0.851 0.165 -0.406 0.255 MuHd_075 : 33.180 13.087 8.502 4.057 MuHd_095 : 18.788 14.461 4.194 4.948 MuHd_100 : 16.240 13.531 3.561 3.888 MuHd_105 : 9.554 8.918 2.289 2.379 Hmax_075 : 13.417 3.967 0.012 2.613 Hmax_095 : 2.200 5.900 -2.495 3.020 Hmax_100 : 2.200 5.900 -2.495 3.020 Hmax_105 : -8.225 -0.800 -5.179 0.735 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9923 0.0077 DFMC : 0.9877 0.0123
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 471 PCHAS_0911900 MNYHSSHIRPEEEMFVDKGIQNARLRKKNQMLIVTLAIVLSMFGFTVIYFNKTNKSSFNNLNVQNYSNDDYLINYLLKSK 80 VVKKFMGSKIEELIVESEKNAKNANIVKNANDEHNKNYNKKTPLFKKNNDGKKFSANLYDMKFIMSNLESVNIFYNFMKK 160 FNKQYNSAEEMQERFYIFTENLKKVEKHNKEKKYMYKKGINPFSDMRPEEFKMRYLNSKLSESTIIDLRHLIPYSAAISK 240 YKSPTDKVNYKSFDWREHNAIIAVKDQKRCASCWAFATAGVIEAQYAIRQNKKISLSEQQLVDCSQNNDGCEGGILPYAF 320 EDLIDMGGLCEDKYYPYVADVPELCEINKCKEKYTAIEYALVPYDNYKEAIQYLGPLTIAVGASEDFQDYDGGIFDGECT 400 GFANHAVILVGYGVESVFDESLKKNVDQYYYIIRNSWSDAWGEEGYMRLKTDESGALRNCVLVQAYVPIIE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0911900 9 YHSSHIR|PE 0.116 . PCHAS_0911900 18 EEMFVDK|GI 0.072 . PCHAS_0911900 24 KGIQNAR|LR 0.081 . PCHAS_0911900 26 IQNARLR|KK 0.097 . PCHAS_0911900 27 QNARLRK|KN 0.201 . PCHAS_0911900 28 NARLRKK|NQ 0.097 . PCHAS_0911900 52 TVIYFNK|TN 0.064 . PCHAS_0911900 55 YFNKTNK|SS 0.089 . PCHAS_0911900 78 LINYLLK|SK 0.078 . PCHAS_0911900 80 NYLLKSK|VV 0.063 . PCHAS_0911900 83 LKSKVVK|KF 0.082 . PCHAS_0911900 84 KSKVVKK|FM 0.179 . PCHAS_0911900 89 KKFMGSK|IE 0.064 . PCHAS_0911900 99 LIVESEK|NA 0.062 . PCHAS_0911900 102 ESEKNAK|NA 0.075 . PCHAS_0911900 108 KNANIVK|NA 0.074 . PCHAS_0911900 116 ANDEHNK|NY 0.067 . PCHAS_0911900 120 HNKNYNK|KT 0.056 . PCHAS_0911900 121 NKNYNKK|TP 0.093 . PCHAS_0911900 126 KKTPLFK|KN 0.067 . PCHAS_0911900 127 KTPLFKK|NN 0.111 . PCHAS_0911900 132 KKNNDGK|KF 0.087 . PCHAS_0911900 133 KNNDGKK|FS 0.124 . PCHAS_0911900 142 ANLYDMK|FI 0.074 . PCHAS_0911900 159 IFYNFMK|KF 0.071 . PCHAS_0911900 160 FYNFMKK|FN 0.117 . PCHAS_0911900 163 FMKKFNK|QY 0.075 . PCHAS_0911900 174 AEEMQER|FY 0.101 . PCHAS_0911900 183 IFTENLK|KV 0.066 . PCHAS_0911900 184 FTENLKK|VE 0.067 . PCHAS_0911900 187 NLKKVEK|HN 0.066 . PCHAS_0911900 190 KVEKHNK|EK 0.060 . PCHAS_0911900 192 EKHNKEK|KY 0.069 . PCHAS_0911900 193 KHNKEKK|YM 0.168 . PCHAS_0911900 197 EKKYMYK|KG 0.063 . PCHAS_0911900 198 KKYMYKK|GI 0.120 . PCHAS_0911900 207 NPFSDMR|PE 0.080 . PCHAS_0911900 212 MRPEEFK|MR 0.060 . PCHAS_0911900 214 PEEFKMR|YL 0.120 . PCHAS_0911900 219 MRYLNSK|LS 0.069 . PCHAS_0911900 229 STIIDLR|HL 0.079 . PCHAS_0911900 240 YSAAISK|YK 0.071 . PCHAS_0911900 242 AAISKYK|SP 0.093 . PCHAS_0911900 247 YKSPTDK|VN 0.079 . PCHAS_0911900 251 TDKVNYK|SF 0.113 . PCHAS_0911900 256 YKSFDWR|EH 0.124 . PCHAS_0911900 265 NAIIAVK|DQ 0.064 . PCHAS_0911900 268 IAVKDQK|RC 0.055 . PCHAS_0911900 269 AVKDQKR|CA 0.225 . PCHAS_0911900 289 EAQYAIR|QN 0.086 . PCHAS_0911900 292 YAIRQNK|KI 0.205 . PCHAS_0911900 293 AIRQNKK|IS 0.094 . PCHAS_0911900 333 GGLCEDK|YY 0.058 . PCHAS_0911900 349 ELCEINK|CK 0.064 . PCHAS_0911900 351 CEINKCK|EK 0.075 . PCHAS_0911900 353 INKCKEK|YT 0.073 . PCHAS_0911900 368 VPYDNYK|EA 0.080 . PCHAS_0911900 423 VFDESLK|KN 0.056 . PCHAS_0911900 424 FDESLKK|NV 0.138 . PCHAS_0911900 434 QYYYIIR|NS 0.074 . PCHAS_0911900 448 GEEGYMR|LK 0.084 . PCHAS_0911900 450 EGYMRLK|TD 0.057 . PCHAS_0911900 458 DESGALR|NC 0.075 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0911900 ATGAATTATCATTCTAGTCACATTAGACCCGAGGAGGAAATGTTTGTTGACAAGGGTATA CAAAATGCAAGGTTACGAAAAAAAAACCAAATGCTTATAGTTACCCTAGCCATAGTTTTA AGTATGTTTGGTTTTACTGTCATATATTTTAATAAAACCAATAAATCATCATTTAATAAT TTAAATGTTCAAAATTATTCGAATGATGACTATTTAATTAATTACTTATTAAAAAGCAAA GTAGTAAAGAAATTTATGGGATCTAAAATTGAAGAACTTATAGTAGAAAGTGAAAAAAAT GCAAAAAATGCCAATATAGTTAAAAATGCTAATGATGAACATAATAAGAACTATAACAAA AAAACTCCATTATTTAAGAAAAATAATGACGGCAAAAAATTCTCAGCAAATTTATATGAT ATGAAATTTATTATGAGCAATTTAGAATCTGTAAACATTTTTTACAACTTCATGAAAAAA TTTAACAAGCAATATAACTCAGCTGAAGAAATGCAAGAAAGATTTTATATCTTTACTGAA AATTTAAAAAAAGTTGAAAAACATAATAAAGAAAAAAAATATATGTATAAAAAAGGTATT AATCCATTTAGTGACATGCGCCCAGAAGAATTTAAAATGAGATATTTAAATAGTAAACTA AGCGAAAGCACCATTATTGATCTTCGCCATTTAATTCCTTATTCTGCTGCAATTAGCAAG TATAAGTCTCCAACCGATAAAGTTAACTATAAAAGTTTTGATTGGAGAGAACATAATGCC ATCATAGCTGTTAAAGATCAAAAAAGATGCGCTTCATGTTGGGCGTTTGCTACTGCTGGT GTTATCGAAGCCCAATACGCTATTAGACAAAATAAAAAGATTTCTTTAAGTGAACAACAA TTAGTTGATTGTTCACAAAATAATGATGGATGTGAAGGAGGAATCCTTCCATATGCTTTT GAAGATCTTATAGATATGGGAGGCTTATGTGAAGATAAATATTATCCATATGTAGCTGAT GTTCCTGAATTATGCGAAATTAACAAATGCAAAGAAAAATACACAGCTATAGAATATGCA TTAGTACCATATGATAATTATAAAGAAGCTATTCAATATTTAGGTCCACTCACAATAGCT GTAGGTGCAAGTGAAGATTTCCAAGATTACGATGGCGGTATATTCGATGGAGAATGCACA GGTTTTGCAAACCACGCAGTTATACTTGTTGGATATGGTGTTGAAAGCGTATTTGATGAA TCTCTTAAAAAAAATGTTGATCAATATTATTATATAATTAGAAACTCATGGAGTGATGCA TGGGGAGAAGAAGGTTACATGAGACTAAAGACCGACGAATCAGGAGCACTCAGAAATTGT GTATTAGTACAAGCTTATGTTCCTATAATTGAATAA
  • Download Fasta

  • Fasta :-

    MNYHSSHIRPEEEMFVDKGIQNARLRKKNQMLIVTLAIVLSMFGFTVIYFNKTNKSSFNN LNVQNYSNDDYLINYLLKSKVVKKFMGSKIEELIVESEKNAKNANIVKNANDEHNKNYNK KTPLFKKNNDGKKFSANLYDMKFIMSNLESVNIFYNFMKKFNKQYNSAEEMQERFYIFTE NLKKVEKHNKEKKYMYKKGINPFSDMRPEEFKMRYLNSKLSESTIIDLRHLIPYSAAISK YKSPTDKVNYKSFDWREHNAIIAVKDQKRCASCWAFATAGVIEAQYAIRQNKKISLSEQQ LVDCSQNNDGCEGGILPYAFEDLIDMGGLCEDKYYPYVADVPELCEINKCKEKYTAIEYA LVPYDNYKEAIQYLGPLTIAVGASEDFQDYDGGIFDGECTGFANHAVILVGYGVESVFDE SLKKNVDQYYYIIRNSWSDAWGEEGYMRLKTDESGALRNCVLVQAYVPIIE

  • title: active site
  • coordinates: Q267,C273,H405,N435
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0911900436 SIIRNSWSDA0.995unspPCHAS_0911900436 SIIRNSWSDA0.995unspPCHAS_0911900436 SIIRNSWSDA0.995unspPCHAS_091190071 YSNDDYLINY0.991unspPCHAS_0911900243 SSKYKSPTDK0.998unsp

PCHAS_091190      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India