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Computed_GO_Component_IDs:
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Computed_GO_Components:
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Computed_GO_Function_IDs:
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Computed_GO_Functions:
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Computed_GO_Process_IDs:
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Computed_GO_Processes:
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Curated_GO_Component_IDs: GO:1990225
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Curated_GO_Function_IDs:
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Curated_GO_Functions:
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Curated_GO_Processes:
No Results
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Fasta :-
>PCHAS_0912300
MSGIRLFYVCIFIVLSTFIHTAKSFQDNDDFWGFSFFDKNGDNNAENEKVEEGSHQNMQH
TDDAANTGNEQQNVVNGSEHHANNTEELKNHEEHGEDQYEHTSQQINNEIEDSNNNNNNN
NSDNTPEHNPSNQTNNSDIQESNHNDMSHQNATTENEHNTEHVPTEDTPADQAPTEQAPT
EHVPTEDTPADQAPTEQAPTDQAPTDQAPTDQAPTDQAPADQAPAEQAPTEQAPAEQAPT
EQAPTEQAPADQAPTEHGHNGEDEGEHSAEGDQINKNNNSKDHSDTTSSSSSSLDSAQFS
DTTSSSSSSSGYSNLRKPVFGSPSNPLKGFSHNVTSQSSSSMPLFNYGQNIKKHATEMFT
DITDKGLDSISDPHKYHLLKKKYIYLSVAERAILEIIDASKKGLDAIRGLKDHELFHKIY
KDAVIRSNLNTHSIARGFDVITLEECDKILSEMFKILTQLSYDNYPKFYKSMNINKSALN
ASFPEIKMKILKKIGVTYSKLPPIFKDTNGNKCPVSDFIISITPRELTQRLAIMFSNWLS
ANEYGSIENFENNVELNVLCSGASILVQQWKYYQNILGFEDNNDHAFLGLIDELLTIDKK
YSKNEEHTESLEKMKKSKVFNYCTKLMRTSGNISTIPFNHENNKTPSSSIIGSLGNLVKA
HISGYYAATAQRINSYFNYSDKKNKKKTLPKVISICTLLNLTDILFNCTDPHSTHTPNWN
LLKLNVLNTKGKDILNHLNNLNYLLNSENEAIKEVCNPKNDTVDKTLQNLLVLISSQSHD
VLAQEVEKKGLGTGYIKDEIKNINEYYYNKIAEGEDDVEKAIFDDL
- Download Fasta
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MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0912300.fa
Sequence name : PCHAS_0912300
Sequence length : 826
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.697
CoefTot : -0.058
ChDiff : -50
ZoneTo : 26
KR : 2
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 2.006 2.188 0.381 0.746
MesoH : -0.532 0.092 -0.444 0.195
MuHd_075 : 15.909 12.137 2.807 3.678
MuHd_095 : 24.543 19.742 7.802 6.634
MuHd_100 : 20.673 13.832 6.425 5.361
MuHd_105 : 20.889 15.702 5.972 5.792
Hmax_075 : 16.800 19.017 2.591 7.860
Hmax_095 : 20.600 24.400 5.436 8.120
Hmax_100 : 20.200 22.200 4.536 7.880
Hmax_105 : 21.700 23.000 4.113 6.210
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.7474 0.2526
DFMC : 0.8427 0.1573
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##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
826 PCHAS_0912300
MSGIRLFYVCIFIVLSTFIHTAKSFQDNDDFWGFSFFDKNGDNNAENEKVEEGSHQNMQHTDDAANTGNEQQNVVNGSEH 80
HANNTEELKNHEEHGEDQYEHTSQQINNEIEDSNNNNNNNNSDNTPEHNPSNQTNNSDIQESNHNDMSHQNATTENEHNT 160
EHVPTEDTPADQAPTEQAPTEHVPTEDTPADQAPTEQAPTDQAPTDQAPTDQAPTDQAPADQAPAEQAPTEQAPAEQAPT 240
EQAPTEQAPADQAPTEHGHNGEDEGEHSAEGDQINKNNNSKDHSDTTSSSSSSLDSAQFSDTTSSSSSSSGYSNLRKPVF 320
GSPSNPLKGFSHNVTSQSSSSMPLFNYGQNIKKHATEMFTDITDKGLDSISDPHKYHLLKKKYIYLSVAERAILEIIDAS 400
KKGLDAIRGLKDHELFHKIYKDAVIRSNLNTHSIARGFDVITLEECDKILSEMFKILTQLSYDNYPKFYKSMNINKSALN 480
ASFPEIKMKILKKIGVTYSKLPPIFKDTNGNKCPVSDFIISITPRELTQRLAIMFSNWLSANEYGSIENFENNVELNVLC 560
SGASILVQQWKYYQNILGFEDNNDHAFLGLIDELLTIDKKYSKNEEHTESLEKMKKSKVFNYCTKLMRTSGNISTIPFNH 640
ENNKTPSSSIIGSLGNLVKAHISGYYAATAQRINSYFNYSDKKNKKKTLPKVISICTLLNLTDILFNCTDPHSTHTPNWN 720
LLKLNVLNTKGKDILNHLNNLNYLLNSENEAIKEVCNPKNDTVDKTLQNLLVLISSQSHDVLAQEVEKKGLGTGYIKDEI 800
KNINEYYYNKIAEGEDDVEKAIFDDL 880
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................................................ 560
................................................................................ 640
................................................................................ 720
................................................................................ 800
.......................... 880
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PCHAS_0912300 5 --MSGIR|LF 0.074 .
PCHAS_0912300 23 TFIHTAK|SF 0.092 .
PCHAS_0912300 39 GFSFFDK|NG 0.071 .
PCHAS_0912300 49 NNAENEK|VE 0.061 .
PCHAS_0912300 89 NNTEELK|NH 0.061 .
PCHAS_0912300 276 EGDQINK|NN 0.056 .
PCHAS_0912300 281 NKNNNSK|DH 0.086 .
PCHAS_0912300 316 SGYSNLR|KP 0.070 .
PCHAS_0912300 317 GYSNLRK|PV 0.143 .
PCHAS_0912300 328 SPSNPLK|GF 0.101 .
PCHAS_0912300 352 NYGQNIK|KH 0.058 .
PCHAS_0912300 353 YGQNIKK|HA 0.126 .
PCHAS_0912300 365 FTDITDK|GL 0.065 .
PCHAS_0912300 375 SISDPHK|YH 0.066 .
PCHAS_0912300 380 HKYHLLK|KK 0.068 .
PCHAS_0912300 381 KYHLLKK|KY 0.086 .
PCHAS_0912300 382 YHLLKKK|YI 0.112 .
PCHAS_0912300 391 YLSVAER|AI 0.120 .
PCHAS_0912300 401 EIIDASK|KG 0.061 .
PCHAS_0912300 402 IIDASKK|GL 0.125 .
PCHAS_0912300 408 KGLDAIR|GL 0.098 .
PCHAS_0912300 411 DAIRGLK|DH 0.095 .
PCHAS_0912300 418 DHELFHK|IY 0.063 .
PCHAS_0912300 421 LFHKIYK|DA 0.071 .
PCHAS_0912300 426 YKDAVIR|SN 0.091 .
PCHAS_0912300 436 NTHSIAR|GF 0.120 .
PCHAS_0912300 448 TLEECDK|IL 0.073 .
PCHAS_0912300 455 ILSEMFK|IL 0.073 .
PCHAS_0912300 467 SYDNYPK|FY 0.061 .
PCHAS_0912300 470 NYPKFYK|SM 0.075 .
PCHAS_0912300 476 KSMNINK|SA 0.084 .
PCHAS_0912300 487 ASFPEIK|MK 0.061 .
PCHAS_0912300 489 FPEIKMK|IL 0.092 .
PCHAS_0912300 492 IKMKILK|KI 0.071 .
PCHAS_0912300 493 KMKILKK|IG 0.081 .
PCHAS_0912300 500 IGVTYSK|LP 0.054 .
PCHAS_0912300 506 KLPPIFK|DT 0.066 .
PCHAS_0912300 512 KDTNGNK|CP 0.053 .
PCHAS_0912300 525 IISITPR|EL 0.128 .
PCHAS_0912300 530 PRELTQR|LA 0.091 .
PCHAS_0912300 571 ILVQQWK|YY 0.082 .
PCHAS_0912300 599 ELLTIDK|KY 0.064 .
PCHAS_0912300 600 LLTIDKK|YS 0.113 .
PCHAS_0912300 603 IDKKYSK|NE 0.063 .
PCHAS_0912300 613 HTESLEK|MK 0.059 .
PCHAS_0912300 615 ESLEKMK|KS 0.062 .
PCHAS_0912300 616 SLEKMKK|SK 0.126 .
PCHAS_0912300 618 EKMKKSK|VF 0.070 .
PCHAS_0912300 625 VFNYCTK|LM 0.068 .
PCHAS_0912300 628 YCTKLMR|TS 0.088 .
PCHAS_0912300 644 FNHENNK|TP 0.067 .
PCHAS_0912300 659 SLGNLVK|AH 0.065 .
PCHAS_0912300 672 YAATAQR|IN 0.081 .
PCHAS_0912300 682 YFNYSDK|KN 0.063 .
PCHAS_0912300 683 FNYSDKK|NK 0.091 .
PCHAS_0912300 685 YSDKKNK|KK 0.058 .
PCHAS_0912300 686 SDKKNKK|KT 0.114 .
PCHAS_0912300 687 DKKNKKK|TL 0.130 .
PCHAS_0912300 691 KKKTLPK|VI 0.068 .
PCHAS_0912300 723 PNWNLLK|LN 0.056 .
PCHAS_0912300 730 LNVLNTK|GK 0.065 .
PCHAS_0912300 732 VLNTKGK|DI 0.092 .
PCHAS_0912300 753 SENEAIK|EV 0.072 .
PCHAS_0912300 759 KEVCNPK|ND 0.059 .
PCHAS_0912300 765 KNDTVDK|TL 0.066 .
PCHAS_0912300 788 LAQEVEK|KG 0.056 .
PCHAS_0912300 789 AQEVEKK|GL 0.146 .
PCHAS_0912300 797 LGTGYIK|DE 0.062 .
PCHAS_0912300 801 YIKDEIK|NI 0.061 .
PCHAS_0912300 810 NEYYYNK|IA 0.072 .
PCHAS_0912300 820 GEDDVEK|AI 0.070 .
____________________________^_________________
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Fasta :-
>PCHAS_0912300
ATGTCTGGCATAAGGTTATTTTATGTATGCATTTTCATAGTGCTCTCTACATTTATTCAT
ACCGCAAAATCATTTCAAGATAATGATGATTTTTGGGGATTTTCCTTTTTTGACAAAAAT
GGCGATAATAACGCGGAAAATGAAAAAGTAGAAGAGGGCTCTCATCAAAATATGCAGCAC
ACTGATGATGCTGCCAATACAGGAAATGAACAACAAAATGTAGTAAATGGTTCTGAGCAT
CATGCAAATAATACTGAAGAATTAAAAAACCATGAAGAACATGGTGAAGATCAATATGAA
CATACTTCTCAACAAATAAATAACGAAATCGAGGATAGCAATAATAACAATAACAATAAT
AACAGTGACAATACTCCAGAGCATAATCCTTCGAACCAAACAAATAATTCAGATATTCAA
GAATCAAATCATAATGACATGAGCCATCAAAATGCTACAACCGAGAATGAACACAACACT
GAACATGTACCAACTGAAGATACACCAGCTGACCAAGCACCAACTGAGCAAGCACCAACT
GAACATGTACCAACTGAAGATACACCAGCTGACCAAGCACCAACTGAACAAGCACCAACT
GATCAAGCACCAACTGATCAAGCACCAACTGATCAAGCACCAACTGATCAAGCACCAGCT
GATCAAGCACCAGCTGAACAAGCACCAACTGAACAAGCACCAGCTGAACAAGCACCAACT
GAACAAGCACCAACTGAACAAGCACCAGCTGATCAAGCACCAACTGAACATGGACATAAT
GGTGAAGATGAAGGTGAACACAGTGCGGAAGGAGACCAAATCAACAAAAACAATAATAGC
AAGGATCACAGTGATACAACTTCAAGCAGCAGTTCTAGTTTAGATAGTGCTCAATTTAGC
GATACCACAAGTTCAAGCTCATCTAGTTCAGGGTACTCGAATTTAAGAAAACCGGTTTTT
GGAAGTCCTTCAAATCCTCTTAAAGGATTTTCACATAATGTTACGTCACAAAGCTCCTCA
AGCATGCCATTATTTAATTATGGGCAAAATATTAAAAAACATGCTACTGAAATGTTTACT
GATATTACGGATAAAGGATTGGACAGTATTTCCGATCCTCATAAATATCATTTATTAAAA
AAAAAATATATATATTTATCAGTAGCAGAAAGAGCAATACTCGAAATTATAGATGCTTCT
AAAAAAGGATTAGATGCAATTCGTGGTTTGAAAGATCATGAATTGTTTCATAAAATATAT
AAGGACGCTGTAATAAGATCAAATTTGAATACCCATTCTATTGCCAGAGGATTCGACGTG
ATCACACTTGAAGAATGTGATAAAATATTATCAGAAATGTTTAAAATATTAACTCAATTG
TCCTATGATAATTATCCGAAATTTTATAAATCTATGAATATTAATAAATCAGCATTAAAC
GCATCGTTTCCAGAAATAAAAATGAAAATATTAAAAAAAATTGGTGTTACATATTCAAAA
TTACCACCAATTTTTAAAGATACAAATGGAAATAAATGCCCAGTTAGTGATTTTATTATA
AGTATAACACCAAGAGAATTAACACAACGACTTGCTATTATGTTTAGTAATTGGCTATCT
GCTAATGAATATGGTTCTATAGAAAATTTTGAAAATAATGTCGAACTAAATGTTTTATGT
TCAGGTGCATCCATATTAGTGCAACAATGGAAATATTATCAAAATATTTTAGGGTTTGAA
GATAATAATGATCATGCCTTTTTAGGTTTAATCGATGAATTGTTAACAATAGACAAAAAA
TATAGTAAAAATGAAGAACATACTGAATCTTTAGAAAAAATGAAAAAATCAAAAGTATTT
AATTATTGTACTAAACTTATGAGAACAAGTGGAAACATTTCGACAATACCATTTAATCAT
GAAAACAATAAAACTCCAAGTTCATCTATTATTGGTTCATTAGGAAATTTAGTTAAGGCA
CACATAAGTGGATATTATGCAGCAACTGCTCAAAGAATTAACTCTTATTTTAATTATTCG
GACAAGAAAAATAAAAAGAAAACACTGCCTAAAGTCATTTCAATTTGTACTCTCTTAAAT
TTAACAGATATATTATTTAATTGTACAGATCCACATTCAACTCATACCCCAAATTGGAAC
CTCTTGAAGCTAAATGTATTAAATACTAAAGGAAAAGATATTCTAAATCATCTTAATAAC
CTAAACTACCTATTAAATAGCGAAAACGAAGCAATTAAAGAAGTGTGTAATCCTAAAAAT
GACACAGTTGATAAAACCTTGCAAAATTTGTTAGTTTTAATTTCATCACAATCACACGAT
GTATTAGCACAAGAAGTAGAAAAGAAAGGTCTCGGTACTGGTTATATTAAGGATGAAATA
AAAAATATAAATGAATATTACTACAATAAGATTGCCGAAGGAGAAGATGATGTTGAGAAA
GCCATTTTTGATGATTTATGA
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| ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method |
| PCHAS_0912300 | 307 S | TSSSSSSSG | 0.992 | unsp | PCHAS_0912300 | 307 S | TSSSSSSSG | 0.992 | unsp | PCHAS_0912300 | 307 S | TSSSSSSSG | 0.992 | unsp | PCHAS_0912300 | 308 S | SSSSSSSGY | 0.991 | unsp | PCHAS_0912300 | 369 S | KGLDSISDP | 0.994 | unsp | PCHAS_0912300 | 528 T | PRELTQRLA | 0.993 | unsp | PCHAS_0912300 | 24 S | HTAKSFQDN | 0.995 | unsp | PCHAS_0912300 | 292 S | SSSSSSLDS | 0.997 | unsp |