PCHAS_0924900 | GPI-anchor transamidase, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0924900SP0.0571760.9422660.000557CS pos: 20-21. VIG-SI. Pr: 0.9407
No Results

  • Fasta :-

    >PCHAS_0924900 MELKIGIVIYLLVAIKCVIGSIYFSGVDIKNMKSKYDEIKNSNNKKYVNEILLKELKKNN YINSNVIALSTSRHYFNYRHTANLLIAYKYLKNNGDIIDKNILLMVPFDQACNCRNIIEG TIFKKYEKFPNEYLNKNMEENLYNKLNIDYKNDNINDEQLRKIIRHRYNSFTPSKNRLYT NEYNEKNLFIYITGHGGINFLKIQEFNILSSSEFNLYIQELLIKNIYKNIFVVIDTCQGY SFYDDILAFINQNKIKNVFLLSSSDRNENSYSFFSSKYLSVSTVDRFTYNFFDYMENIHQ MQSKEIYKNLKLFSLQNILNYLKTKNLMSHPSINNSKFNVSSFLHDQNIIFYDSSMLFPK FFISKLNNTNDSNNNHDSVHSEHACFGYLGICGHIKSQIYLNMESLYHDRSYYNNDDVHN SYEIYFTDIGFNFKYFDIYYMITFLILLFFILLFLTLFVLN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0924900.fa Sequence name : PCHAS_0924900 Sequence length : 461 VALUES OF COMPUTED PARAMETERS Coef20 : 4.111 CoefTot : -0.792 ChDiff : 5 ZoneTo : 27 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.994 3.347 0.571 1.097 MesoH : -0.317 0.480 -0.341 0.339 MuHd_075 : 15.084 17.700 5.259 5.522 MuHd_095 : 12.926 14.394 4.515 4.584 MuHd_100 : 14.333 18.518 4.218 4.447 MuHd_105 : 15.234 21.034 4.415 5.105 Hmax_075 : 18.317 27.300 6.490 7.157 Hmax_095 : 17.413 25.287 4.510 8.015 Hmax_100 : 20.400 30.200 5.949 8.900 Hmax_105 : 20.767 29.750 6.099 8.750 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9927 0.0073 DFMC : 0.9973 0.0027
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 461 PCHAS_0924900 MELKIGIVIYLLVAIKCVIGSIYFSGVDIKNMKSKYDEIKNSNNKKYVNEILLKELKKNNYINSNVIALSTSRHYFNYRH 80 TANLLIAYKYLKNNGDIIDKNILLMVPFDQACNCRNIIEGTIFKKYEKFPNEYLNKNMEENLYNKLNIDYKNDNINDEQL 160 RKIIRHRYNSFTPSKNRLYTNEYNEKNLFIYITGHGGINFLKIQEFNILSSSEFNLYIQELLIKNIYKNIFVVIDTCQGY 240 SFYDDILAFINQNKIKNVFLLSSSDRNENSYSFFSSKYLSVSTVDRFTYNFFDYMENIHQMQSKEIYKNLKLFSLQNILN 320 YLKTKNLMSHPSINNSKFNVSSFLHDQNIIFYDSSMLFPKFFISKLNNTNDSNNNHDSVHSEHACFGYLGICGHIKSQIY 400 LNMESLYHDRSYYNNDDVHNSYEIYFTDIGFNFKYFDIYYMITFLILLFFILLFLTLFVLN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0924900 4 ---MELK|IG 0.057 . PCHAS_0924900 16 YLLVAIK|CV 0.068 . PCHAS_0924900 30 FSGVDIK|NM 0.060 . PCHAS_0924900 33 VDIKNMK|SK 0.087 . PCHAS_0924900 35 IKNMKSK|YD 0.096 . PCHAS_0924900 40 SKYDEIK|NS 0.065 . PCHAS_0924900 45 IKNSNNK|KY 0.059 . PCHAS_0924900 46 KNSNNKK|YV 0.276 . PCHAS_0924900 54 VNEILLK|EL 0.056 . PCHAS_0924900 57 ILLKELK|KN 0.058 . PCHAS_0924900 58 LLKELKK|NN 0.086 . PCHAS_0924900 73 IALSTSR|HY 0.091 . PCHAS_0924900 79 RHYFNYR|HT 0.098 . PCHAS_0924900 89 NLLIAYK|YL 0.065 . PCHAS_0924900 92 IAYKYLK|NN 0.074 . PCHAS_0924900 100 NGDIIDK|NI 0.054 . PCHAS_0924900 115 DQACNCR|NI 0.105 . PCHAS_0924900 124 IEGTIFK|KY 0.063 . PCHAS_0924900 125 EGTIFKK|YE 0.073 . PCHAS_0924900 128 IFKKYEK|FP 0.060 . PCHAS_0924900 136 PNEYLNK|NM 0.064 . PCHAS_0924900 145 EENLYNK|LN 0.060 . PCHAS_0924900 151 KLNIDYK|ND 0.066 . PCHAS_0924900 161 INDEQLR|KI 0.086 . PCHAS_0924900 162 NDEQLRK|II 0.080 . PCHAS_0924900 165 QLRKIIR|HR 0.086 . PCHAS_0924900 167 RKIIRHR|YN 0.101 . PCHAS_0924900 175 NSFTPSK|NR 0.053 . PCHAS_0924900 177 FTPSKNR|LY 0.076 . PCHAS_0924900 186 TNEYNEK|NL 0.072 . PCHAS_0924900 202 GGINFLK|IQ 0.064 . PCHAS_0924900 224 IQELLIK|NI 0.064 . PCHAS_0924900 228 LIKNIYK|NI 0.082 . PCHAS_0924900 254 AFINQNK|IK 0.064 . PCHAS_0924900 256 INQNKIK|NV 0.090 . PCHAS_0924900 266 LLSSSDR|NE 0.085 . PCHAS_0924900 277 YSFFSSK|YL 0.080 . PCHAS_0924900 286 SVSTVDR|FT 0.134 . PCHAS_0924900 304 IHQMQSK|EI 0.090 . PCHAS_0924900 308 QSKEIYK|NL 0.056 . PCHAS_0924900 311 EIYKNLK|LF 0.059 . PCHAS_0924900 323 NILNYLK|TK 0.051 . PCHAS_0924900 325 LNYLKTK|NL 0.067 . PCHAS_0924900 337 PSINNSK|FN 0.065 . PCHAS_0924900 360 SSMLFPK|FF 0.084 . PCHAS_0924900 365 PKFFISK|LN 0.061 . PCHAS_0924900 396 GICGHIK|SQ 0.077 . PCHAS_0924900 410 ESLYHDR|SY 0.111 . PCHAS_0924900 434 DIGFNFK|YF 0.068 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0924900 ATGGAACTAAAAATAGGGATAGTTATATATTTATTGGTAGCAATAAAATGTGTAATTGGA TCAATTTATTTTTCGGGTGTAGACATAAAAAATATGAAAAGTAAATATGATGAAATAAAA AATAGTAATAATAAAAAATATGTAAACGAAATATTATTAAAAGAATTAAAAAAAAATAAT TATATTAATAGTAATGTTATAGCATTAAGTACATCAAGACATTATTTTAATTACAGACAT ACAGCTAATTTATTAATTGCATATAAATATTTAAAAAATAATGGAGATATTATAGATAAA AATATTTTACTTATGGTACCATTTGATCAAGCTTGCAATTGTAGAAATATTATAGAAGGT ACAATTTTTAAAAAATATGAAAAATTTCCAAATGAATATCTTAATAAAAATATGGAAGAA AATTTATATAATAAATTAAATATCGATTATAAAAATGATAATATAAATGATGAACAATTA AGAAAAATTATAAGACATAGGTACAACAGTTTTACACCTTCTAAAAATAGATTATATACT AACGAATATAATGAAAAGAATTTATTTATTTATATTACAGGGCATGGTGGAATAAATTTT TTAAAAATTCAAGAATTTAACATTTTAAGTTCTTCTGAATTTAATTTATATATTCAAGAA TTACTTATAAAAAATATATATAAAAACATTTTTGTAGTAATCGACACATGTCAAGGTTAT AGTTTTTATGATGACATACTAGCATTTATAAACCAAAATAAAATAAAGAATGTTTTTTTA TTGTCATCATCGGATAGAAATGAAAACAGCTATAGCTTTTTCTCAAGTAAATATTTAAGT GTTTCAACGGTAGACAGATTTACTTATAATTTTTTTGATTATATGGAAAACATCCATCAA ATGCAATCAAAAGAAATATATAAAAATTTGAAATTATTTTCATTACAAAATATATTGAAT TATTTAAAAACAAAAAATTTAATGTCACACCCCTCAATAAATAATTCAAAATTTAATGTA TCATCATTTTTACATGATCAAAATATTATTTTTTACGATTCAAGTATGTTGTTTCCAAAA TTTTTTATTAGCAAGCTTAATAATACAAATGATTCCAACAACAATCATGATAGTGTTCAT TCCGAGCATGCATGCTTTGGTTATTTAGGTATATGTGGTCATATAAAAAGTCAAATATAT TTAAATATGGAAAGTTTATATCATGATCGAAGTTATTACAACAACGACGATGTGCATAAT AGTTATGAAATTTATTTCACTGATATAGGCTTTAATTTTAAATATTTTGATATATATTAT ATGATAACATTTTTGATTTTGTTATTTTTTATTTTACTTTTTCTTACACTATTTGTATTA AACTAA
  • Download Fasta

  • Fasta :-

    MELKIGIVIYLLVAIKCVIGSIYFSGVDIKNMKSKYDEIKNSNNKKYVNEILLKELKKNN YINSNVIALSTSRHYFNYRHTANLLIAYKYLKNNGDIIDKNILLMVPFDQACNCRNIIEG TIFKKYEKFPNEYLNKNMEENLYNKLNIDYKNDNINDEQLRKIIRHRYNSFTPSKNRLYT NEYNEKNLFIYITGHGGINFLKIQEFNILSSSEFNLYIQELLIKNIYKNIFVVIDTCQGY SFYDDILAFINQNKIKNVFLLSSSDRNENSYSFFSSKYLSVSTVDRFTYNFFDYMENIHQ MQSKEIYKNLKLFSLQNILNYLKTKNLMSHPSINNSKFNVSSFLHDQNIIFYDSSMLFPK FFISKLNNTNDSNNNHDSVHSEHACFGYLGICGHIKSQIYLNMESLYHDRSYYNNDDVHN SYEIYFTDIGFNFKYFDIYYMITFLILLFFILLFLTLFVLN

    No Results
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IDSitePeptideScoreMethod
PCHAS_092490034 SKNMKSKYDE0.995unsp

PCHAS_092490      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India