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_IDPredictionOTHERSPmTPCS_Position
PCHAS_0933600OTHER0.9999890.0000030.000008
No Results
  • Fasta :-

    >PCHAS_0933600 MTQQYKAEVKGNDNEKRNDSDMVEAGEMKEEDNCTNEQAENSKTSEKRTYKTIFKDIISP KNDNMCYDDAKDLDDKTKKAEKSKSKNENDNDNDNENKTGTDEKFITYKVPKYLRKRNIK CPFIYKQVFYGKYGIVNYDLQGSNKETLVITFHGLNGTNLTFFEIQKVLIRYKFQVLNFD LYGHGLSACPKYSHKNKTYGIDFFLSQTEELLTHLNLLDRNFYLIGFSMGCIIATSFAKK YINQVKKIILISPVGALEKKPFLVKLLKLFPYIINISSFFMLPYLISKRNFKKKKNKNDM DSEDEASYYMHNRIMWQAFVKKNITHSILGCINNLKMWSSHETFKEVGLHHIPVLILCGD KDNICSLHVLKNTSKLFVNSHLIIFKNASHLVLVDKSREINSCVLIFFLSSNTTNLKSCQ HMFPSDNIET
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0933600.fa Sequence name : PCHAS_0933600 Sequence length : 430 VALUES OF COMPUTED PARAMETERS Coef20 : 2.943 CoefTot : -0.439 ChDiff : 13 ZoneTo : 7 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.088 1.724 0.406 0.699 MesoH : 0.046 0.871 -0.238 0.369 MuHd_075 : 13.781 7.337 2.855 2.953 MuHd_095 : 12.083 6.442 2.882 3.269 MuHd_100 : 18.385 7.930 4.046 4.718 MuHd_105 : 19.354 6.337 4.129 4.826 Hmax_075 : -19.250 -7.117 -8.114 -1.190 Hmax_095 : -20.600 -9.600 -8.442 -1.870 Hmax_100 : -15.300 -6.800 -6.899 -1.070 Hmax_105 : -14.700 -6.400 -6.484 -0.310 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9653 0.0347 DFMC : 0.9236 0.0764
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 430 PCHAS_0933600 MTQQYKAEVKGNDNEKRNDSDMVEAGEMKEEDNCTNEQAENSKTSEKRTYKTIFKDIISPKNDNMCYDDAKDLDDKTKKA 80 EKSKSKNENDNDNDNENKTGTDEKFITYKVPKYLRKRNIKCPFIYKQVFYGKYGIVNYDLQGSNKETLVITFHGLNGTNL 160 TFFEIQKVLIRYKFQVLNFDLYGHGLSACPKYSHKNKTYGIDFFLSQTEELLTHLNLLDRNFYLIGFSMGCIIATSFAKK 240 YINQVKKIILISPVGALEKKPFLVKLLKLFPYIINISSFFMLPYLISKRNFKKKKNKNDMDSEDEASYYMHNRIMWQAFV 320 KKNITHSILGCINNLKMWSSHETFKEVGLHHIPVLILCGDKDNICSLHVLKNTSKLFVNSHLIIFKNASHLVLVDKSREI 400 NSCVLIFFLSSNTTNLKSCQHMFPSDNIET 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .............................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0933600 6 -MTQQYK|AE 0.062 . PCHAS_0933600 10 QYKAEVK|GN 0.067 . PCHAS_0933600 16 KGNDNEK|RN 0.064 . PCHAS_0933600 17 GNDNEKR|ND 0.259 . PCHAS_0933600 29 VEAGEMK|EE 0.061 . PCHAS_0933600 43 EQAENSK|TS 0.061 . PCHAS_0933600 47 NSKTSEK|RT 0.063 . PCHAS_0933600 48 SKTSEKR|TY 0.238 . PCHAS_0933600 51 SEKRTYK|TI 0.149 . PCHAS_0933600 55 TYKTIFK|DI 0.067 . PCHAS_0933600 61 KDIISPK|ND 0.067 . PCHAS_0933600 71 MCYDDAK|DL 0.091 . PCHAS_0933600 76 AKDLDDK|TK 0.056 . PCHAS_0933600 78 DLDDKTK|KA 0.080 . PCHAS_0933600 79 LDDKTKK|AE 0.082 . PCHAS_0933600 82 KTKKAEK|SK 0.101 . PCHAS_0933600 84 KKAEKSK|SK 0.093 . PCHAS_0933600 86 AEKSKSK|NE 0.065 . PCHAS_0933600 98 DNDNENK|TG 0.059 . PCHAS_0933600 104 KTGTDEK|FI 0.073 . PCHAS_0933600 109 EKFITYK|VP 0.056 . PCHAS_0933600 112 ITYKVPK|YL 0.073 . PCHAS_0933600 115 KVPKYLR|KR 0.068 . PCHAS_0933600 116 VPKYLRK|RN 0.082 . PCHAS_0933600 117 PKYLRKR|NI 0.141 . PCHAS_0933600 120 LRKRNIK|CP 0.133 . PCHAS_0933600 126 KCPFIYK|QV 0.075 . PCHAS_0933600 132 KQVFYGK|YG 0.065 . PCHAS_0933600 145 DLQGSNK|ET 0.066 . PCHAS_0933600 167 TFFEIQK|VL 0.061 . PCHAS_0933600 171 IQKVLIR|YK 0.106 . PCHAS_0933600 173 KVLIRYK|FQ 0.057 . PCHAS_0933600 191 GLSACPK|YS 0.087 . PCHAS_0933600 195 CPKYSHK|NK 0.072 . PCHAS_0933600 197 KYSHKNK|TY 0.095 . PCHAS_0933600 220 HLNLLDR|NF 0.092 . PCHAS_0933600 239 IATSFAK|KY 0.066 . PCHAS_0933600 240 ATSFAKK|YI 0.203 . PCHAS_0933600 246 KYINQVK|KI 0.067 . PCHAS_0933600 247 YINQVKK|II 0.121 . PCHAS_0933600 259 PVGALEK|KP 0.055 . PCHAS_0933600 260 VGALEKK|PF 0.084 . PCHAS_0933600 265 KKPFLVK|LL 0.054 . PCHAS_0933600 268 FLVKLLK|LF 0.059 . PCHAS_0933600 288 LPYLISK|RN 0.062 . PCHAS_0933600 289 PYLISKR|NF 0.118 . PCHAS_0933600 292 ISKRNFK|KK 0.126 . PCHAS_0933600 293 SKRNFKK|KK 0.127 . PCHAS_0933600 294 KRNFKKK|KN 0.171 . PCHAS_0933600 295 RNFKKKK|NK 0.127 . PCHAS_0933600 297 FKKKKNK|ND 0.085 . PCHAS_0933600 313 SYYMHNR|IM 0.110 . PCHAS_0933600 321 MWQAFVK|KN 0.066 . PCHAS_0933600 322 WQAFVKK|NI 0.135 . PCHAS_0933600 336 GCINNLK|MW 0.071 . PCHAS_0933600 345 SSHETFK|EV 0.092 . PCHAS_0933600 361 LILCGDK|DN 0.064 . PCHAS_0933600 371 CSLHVLK|NT 0.067 . PCHAS_0933600 375 VLKNTSK|LF 0.056 . PCHAS_0933600 386 SHLIIFK|NA 0.066 . PCHAS_0933600 396 HLVLVDK|SR 0.076 . PCHAS_0933600 398 VLVDKSR|EI 0.094 . PCHAS_0933600 417 SNTTNLK|SC 0.076 . ____________________________^_________________
  • Fasta :-

    >PCHAS_0933600 ATGACACAACAATACAAAGCTGAAGTAAAAGGCAATGATAACGAAAAGCGAAATGATAGT GATATGGTGGAGGCCGGAGAAATGAAGGAAGAAGACAATTGCACAAATGAACAAGCTGAA AATAGTAAGACAAGTGAAAAACGAACTTACAAAACAATTTTTAAAGATATAATATCACCA AAAAATGATAATATGTGCTATGATGATGCAAAGGATTTAGACGATAAAACAAAGAAAGCG GAAAAGAGCAAGAGCAAGAACGAAAATGATAATGATAATGATAATGAGAATAAAACGGGG ACGGATGAAAAGTTTATTACATATAAAGTGCCAAAATATTTAAGAAAAAGAAATATAAAA TGCCCATTTATATATAAACAAGTATTTTATGGAAAGTATGGTATAGTGAATTATGATTTA CAAGGAAGTAATAAAGAAACATTGGTTATAACTTTTCATGGATTGAATGGCACTAATTTA ACATTTTTTGAAATTCAAAAAGTATTAATTCGATATAAATTTCAAGTTCTTAATTTTGAT TTGTATGGACATGGATTATCTGCATGTCCAAAATATAGTCATAAAAACAAAACATATGGC ATTGATTTTTTTTTATCTCAAACTGAAGAATTATTAACACATTTAAATTTATTAGACAGA AATTTTTATTTGATTGGCTTTTCTATGGGATGTATTATTGCTACTAGCTTTGCAAAAAAA TATATTAATCAAGTTAAAAAAATTATTTTAATATCACCTGTTGGAGCTTTAGAAAAAAAA CCATTTTTAGTAAAATTATTAAAACTTTTCCCATACATAATTAATATATCCTCTTTCTTT ATGTTACCATATCTTATTTCAAAACGAAATTTCAAAAAAAAAAAAAATAAAAATGATATG GATTCTGAAGATGAGGCATCTTACTATATGCACAACAGAATTATGTGGCAAGCTTTTGTT AAAAAAAATATTACACATTCTATTTTAGGTTGTATTAATAACTTAAAAATGTGGAGTTCC CATGAAACATTTAAAGAAGTTGGACTTCATCATATACCCGTTTTAATTTTATGCGGGGAT AAAGATAATATATGTAGTCTACATGTACTTAAAAATACATCCAAGCTTTTTGTTAATTCT CATCTTATTATATTTAAAAATGCTTCTCACTTAGTTCTTGTAGATAAAAGCAGAGAAATT AATTCATGTGTTCTTATATTTTTCCTATCCTCAAATACTACAAATTTGAAATCATGTCAA CATATGTTTCCAAGTGATAATATAGAGACATAA
  • Download Fasta
  • Fasta :-

    MTQQYKAEVKGNDNEKRNDSDMVEAGEMKEEDNCTNEQAENSKTSEKRTYKTIFKDIISP KNDNMCYDDAKDLDDKTKKAEKSKSKNENDNDNDNENKTGTDEKFITYKVPKYLRKRNIK CPFIYKQVFYGKYGIVNYDLQGSNKETLVITFHGLNGTNLTFFEIQKVLIRYKFQVLNFD LYGHGLSACPKYSHKNKTYGIDFFLSQTEELLTHLNLLDRNFYLIGFSMGCIIATSFAKK YINQVKKIILISPVGALEKKPFLVKLLKLFPYIINISSFFMLPYLISKRNFKKKKNKNDM DSEDEASYYMHNRIMWQAFVKKNITHSILGCINNLKMWSSHETFKEVGLHHIPVLILCGD KDNICSLHVLKNTSKLFVNSHLIIFKNASHLVLVDKSREINSCVLIFFLSSNTTNLKSCQ HMFPSDNIET

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0933600143 SDLQGSNKET0.991unspPCHAS_0933600143 SDLQGSNKET0.991unspPCHAS_0933600143 SDLQGSNKET0.991unspPCHAS_0933600302 SNDMDSEDEA0.995unspPCHAS_093360045 SNSKTSEKRT0.998unspPCHAS_093360085 SEKSKSKNEN0.996unsp

PCHAS_093360      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India