PCHAS_0933700 | SPRY domain, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0933700OTHER0.9999920.0000010.000007
No Results

  • Fasta :-

    >PCHAS_0933700 MEPYKQNSVTTNNSTEYSNSSIKDIDEKNETNDINRSNKKRKVEPLDDGQSEIQKMHQGG VKNEYIENMEKDNKNQCLNNSDESGHEKNANNSNKNNDKPDKTGNSSNNEYTKRDTINML EKSKELKKDNYKYYIDYRKYRNKNNVAFSTKYKDSCISLSSDKLTCYGDKGWSSVFVNNG ADVGKWYYEIKIEEPVEKFNFLGYKDTILKVNPYVRVGFACRYMRYDYPIGTDKYSYCVN SKNGKIFNNSISYDCMEPIKVGDIIGCYINLKNKNSYTFDPRSDKKLYEYLQNGILCDPK NPPILKKNYGSFIFFSLNGQIKKNAFIDIYEGFYHPSVSLYMGASAKINLGPKFTYRHLN DYVPCIYMDPPIIL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0933700.fa Sequence name : PCHAS_0933700 Sequence length : 374 VALUES OF COMPUTED PARAMETERS Coef20 : 3.390 CoefTot : -1.089 ChDiff : 8 ZoneTo : 15 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.541 0.871 -0.075 0.413 MesoH : -0.644 0.054 -0.444 0.212 MuHd_075 : 21.214 13.724 7.034 2.701 MuHd_095 : 17.682 2.898 5.124 0.907 MuHd_100 : 25.308 5.590 6.893 1.807 MuHd_105 : 25.601 6.277 6.660 2.252 Hmax_075 : 0.233 -0.000 -2.345 0.600 Hmax_095 : -0.200 -6.900 -2.926 -0.860 Hmax_100 : 1.500 -5.900 -2.642 -0.340 Hmax_105 : 1.838 -5.862 -2.416 -0.030 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9912 0.0088 DFMC : 0.9673 0.0327
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 374 PCHAS_0933700 MEPYKQNSVTTNNSTEYSNSSIKDIDEKNETNDINRSNKKRKVEPLDDGQSEIQKMHQGGVKNEYIENMEKDNKNQCLNN 80 SDESGHEKNANNSNKNNDKPDKTGNSSNNEYTKRDTINMLEKSKELKKDNYKYYIDYRKYRNKNNVAFSTKYKDSCISLS 160 SDKLTCYGDKGWSSVFVNNGADVGKWYYEIKIEEPVEKFNFLGYKDTILKVNPYVRVGFACRYMRYDYPIGTDKYSYCVN 240 SKNGKIFNNSISYDCMEPIKVGDIIGCYINLKNKNSYTFDPRSDKKLYEYLQNGILCDPKNPPILKKNYGSFIFFSLNGQ 320 IKKNAFIDIYEGFYHPSVSLYMGASAKINLGPKFTYRHLNDYVPCIYMDPPIIL 400 ........................................P....................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0933700 5 --MEPYK|QN 0.069 . PCHAS_0933700 23 YSNSSIK|DI 0.099 . PCHAS_0933700 28 IKDIDEK|NE 0.057 . PCHAS_0933700 36 ETNDINR|SN 0.105 . PCHAS_0933700 39 DINRSNK|KR 0.110 . PCHAS_0933700 40 INRSNKK|RK 0.089 . PCHAS_0933700 41 NRSNKKR|KV 0.605 *ProP* PCHAS_0933700 42 RSNKKRK|VE 0.089 . PCHAS_0933700 55 GQSEIQK|MH 0.074 . PCHAS_0933700 62 MHQGGVK|NE 0.062 . PCHAS_0933700 71 YIENMEK|DN 0.059 . PCHAS_0933700 74 NMEKDNK|NQ 0.054 . PCHAS_0933700 88 DESGHEK|NA 0.078 . PCHAS_0933700 95 NANNSNK|NN 0.085 . PCHAS_0933700 99 SNKNNDK|PD 0.069 . PCHAS_0933700 102 NNDKPDK|TG 0.061 . PCHAS_0933700 113 SNNEYTK|RD 0.065 . PCHAS_0933700 114 NNEYTKR|DT 0.249 . PCHAS_0933700 122 TINMLEK|SK 0.092 . PCHAS_0933700 124 NMLEKSK|EL 0.057 . PCHAS_0933700 127 EKSKELK|KD 0.064 . PCHAS_0933700 128 KSKELKK|DN 0.124 . PCHAS_0933700 132 LKKDNYK|YY 0.071 . PCHAS_0933700 138 KYYIDYR|KY 0.081 . PCHAS_0933700 139 YYIDYRK|YR 0.074 . PCHAS_0933700 141 IDYRKYR|NK 0.310 . PCHAS_0933700 143 YRKYRNK|NN 0.063 . PCHAS_0933700 151 NVAFSTK|YK 0.072 . PCHAS_0933700 153 AFSTKYK|DS 0.100 . PCHAS_0933700 163 ISLSSDK|LT 0.063 . PCHAS_0933700 170 LTCYGDK|GW 0.070 . PCHAS_0933700 185 NGADVGK|WY 0.072 . PCHAS_0933700 191 KWYYEIK|IE 0.077 . PCHAS_0933700 198 IEEPVEK|FN 0.075 . PCHAS_0933700 205 FNFLGYK|DT 0.069 . PCHAS_0933700 210 YKDTILK|VN 0.056 . PCHAS_0933700 216 KVNPYVR|VG 0.087 . PCHAS_0933700 222 RVGFACR|YM 0.082 . PCHAS_0933700 225 FACRYMR|YD 0.308 . PCHAS_0933700 234 YPIGTDK|YS 0.064 . PCHAS_0933700 242 SYCVNSK|NG 0.058 . PCHAS_0933700 245 VNSKNGK|IF 0.069 . PCHAS_0933700 260 DCMEPIK|VG 0.061 . PCHAS_0933700 272 GCYINLK|NK 0.057 . PCHAS_0933700 274 YINLKNK|NS 0.064 . PCHAS_0933700 282 SYTFDPR|SD 0.098 . PCHAS_0933700 285 FDPRSDK|KL 0.117 . PCHAS_0933700 286 DPRSDKK|LY 0.109 . PCHAS_0933700 300 GILCDPK|NP 0.055 . PCHAS_0933700 306 KNPPILK|KN 0.060 . PCHAS_0933700 307 NPPILKK|NY 0.125 . PCHAS_0933700 322 SLNGQIK|KN 0.066 . PCHAS_0933700 323 LNGQIKK|NA 0.107 . PCHAS_0933700 347 YMGASAK|IN 0.061 . PCHAS_0933700 353 KINLGPK|FT 0.075 . PCHAS_0933700 357 GPKFTYR|HL 0.143 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0933700 ATGGAACCATATAAACAAAATTCTGTAACAACAAATAATAGTACAGAATACAGTAACAGT AGCATAAAAGACATCGATGAAAAAAATGAAACAAATGATATTAATAGGTCTAATAAAAAA AGGAAAGTCGAGCCATTAGATGATGGCCAATCAGAGATACAAAAAATGCATCAAGGTGGA GTTAAAAATGAATATATTGAAAATATGGAAAAAGACAATAAAAATCAATGTTTAAATAAT AGTGATGAATCAGGACATGAAAAAAATGCAAATAATTCAAATAAAAATAATGATAAACCC GATAAGACTGGCAATAGCAGTAATAATGAATATACGAAAAGAGATACTATTAATATGTTA GAAAAATCGAAAGAATTAAAAAAAGATAATTATAAATATTATATTGATTATAGAAAATAT CGAAACAAAAACAATGTGGCATTTTCAACGAAATATAAAGATAGCTGTATTAGTTTAAGT AGTGATAAACTTACATGTTATGGAGATAAAGGATGGTCTAGTGTTTTTGTTAATAATGGT GCGGATGTAGGGAAATGGTATTATGAAATAAAGATTGAAGAGCCTGTAGAAAAATTTAAT TTTTTGGGTTATAAAGATACAATTTTAAAAGTAAACCCATATGTAAGAGTTGGATTTGCT TGTAGATATATGAGATATGATTATCCAATAGGAACTGATAAATATAGTTATTGTGTTAAT AGTAAAAATGGAAAAATATTTAATAATTCAATAAGTTATGATTGTATGGAACCTATTAAA GTTGGTGATATAATTGGATGTTATATTAATTTAAAAAATAAAAATAGTTATACTTTTGAT CCACGATCAGATAAAAAACTCTATGAATATTTACAAAATGGAATTTTATGTGATCCAAAA AACCCACCTATATTAAAGAAAAATTATGGCTCCTTTATATTTTTTTCCTTAAATGGTCAA ATAAAAAAAAATGCATTTATTGATATTTATGAAGGATTTTATCATCCGTCGGTTAGCTTA TATATGGGAGCTTCTGCTAAAATTAATTTAGGGCCAAAATTTACATATCGTCATTTAAAT GATTATGTCCCATGTATATATATGGACCCACCAATTATTTTGTAA
  • Download Fasta

  • Fasta :-

    MEPYKQNSVTTNNSTEYSNSSIKDIDEKNETNDINRSNKKRKVEPLDDGQSEIQKMHQGG VKNEYIENMEKDNKNQCLNNSDESGHEKNANNSNKNNDKPDKTGNSSNNEYTKRDTINML EKSKELKKDNYKYYIDYRKYRNKNNVAFSTKYKDSCISLSSDKLTCYGDKGWSSVFVNNG ADVGKWYYEIKIEEPVEKFNFLGYKDTILKVNPYVRVGFACRYMRYDYPIGTDKYSYCVN SKNGKIFNNSISYDCMEPIKVGDIIGCYINLKNKNSYTFDPRSDKKLYEYLQNGILCDPK NPPILKKNYGSFIFFSLNGQIKKNAFIDIYEGFYHPSVSLYMGASAKINLGPKFTYRHLN DYVPCIYMDPPIIL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0933700283 SFDPRSDKKL0.99unspPCHAS_0933700283 SFDPRSDKKL0.99unspPCHAS_0933700283 SFDPRSDKKL0.99unspPCHAS_093370021 SYSNSSIKDI0.998unspPCHAS_093370093 SNANNSNKNN0.99unsp

PCHAS_093370      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India