PCHAS_1001200 | lysophospholipase, putative

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1001200OTHER0.9998410.0000450.000114
No Results

  • Fasta :-

    >PCHAS_1001200 MEEIELNNDELRSATVSKLDGDPKIGWLCNKNGLLLKTYGWVVQNAIGIILLIHGLKSHT RLTFMRINLKMPNNNEGIIVDTDNYYIYKDSWIEKFNQNGYSVYALDFQGHGESQSLGNV RGDFNYYDDLVDDVIQYMNQIQDEIENDNQTNGDISNDSQMNDESYIVPTKKKRLPMYII GHSMGGSIAIRILQLLQKEKKNSIQSGDANNYKTCKAILDNSTNINEMDNDMYYMNNSNG YGSDNSCASTSATINDIASGKDKGCYNYLDNLNIKGCVTLSCMLRLKTPFDSGNKSFKYF YLPITNFLSRVAPHTLISSESHYKRSEYVANICKYDKFRNNNGIKFKCMSELMKATITLN GDINYMPKNIPILFVHSRDDNICCYKGTVLFHSKAKVKKNNIHIVDDMGHAITSESGNEE LLKTIIDWISDVRSHGEYEDEEEEEDEDGICFNNAYINSCFVFL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1001200.fa Sequence name : PCHAS_1001200 Sequence length : 464 VALUES OF COMPUTED PARAMETERS Coef20 : 3.554 CoefTot : 0.000 ChDiff : -16 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.212 1.606 0.063 0.702 MesoH : -0.808 0.110 -0.420 0.171 MuHd_075 : 24.811 17.154 6.704 5.820 MuHd_095 : 11.471 7.386 3.618 1.150 MuHd_100 : 11.832 5.167 1.751 1.612 MuHd_105 : 21.870 8.532 4.504 3.647 Hmax_075 : -7.233 2.100 -4.183 1.528 Hmax_095 : -4.000 5.700 -2.369 0.910 Hmax_100 : -7.900 -1.400 -5.194 0.050 Hmax_105 : -2.100 3.800 -3.106 1.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9480 0.0520 DFMC : 0.9609 0.0391
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 464 PCHAS_1001200 MEEIELNNDELRSATVSKLDGDPKIGWLCNKNGLLLKTYGWVVQNAIGIILLIHGLKSHTRLTFMRINLKMPNNNEGIIV 80 DTDNYYIYKDSWIEKFNQNGYSVYALDFQGHGESQSLGNVRGDFNYYDDLVDDVIQYMNQIQDEIENDNQTNGDISNDSQ 160 MNDESYIVPTKKKRLPMYIIGHSMGGSIAIRILQLLQKEKKNSIQSGDANNYKTCKAILDNSTNINEMDNDMYYMNNSNG 240 YGSDNSCASTSATINDIASGKDKGCYNYLDNLNIKGCVTLSCMLRLKTPFDSGNKSFKYFYLPITNFLSRVAPHTLISSE 320 SHYKRSEYVANICKYDKFRNNNGIKFKCMSELMKATITLNGDINYMPKNIPILFVHSRDDNICCYKGTVLFHSKAKVKKN 400 NIHIVDDMGHAITSESGNEELLKTIIDWISDVRSHGEYEDEEEEEDEDGICFNNAYINSCFVFL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1001200 12 LNNDELR|SA 0.168 . PCHAS_1001200 18 RSATVSK|LD 0.075 . PCHAS_1001200 24 KLDGDPK|IG 0.058 . PCHAS_1001200 31 IGWLCNK|NG 0.053 . PCHAS_1001200 37 KNGLLLK|TY 0.070 . PCHAS_1001200 57 LLIHGLK|SH 0.069 . PCHAS_1001200 61 GLKSHTR|LT 0.094 . PCHAS_1001200 66 TRLTFMR|IN 0.105 . PCHAS_1001200 70 FMRINLK|MP 0.060 . PCHAS_1001200 89 DNYYIYK|DS 0.073 . PCHAS_1001200 95 KDSWIEK|FN 0.080 . PCHAS_1001200 121 QSLGNVR|GD 0.091 . PCHAS_1001200 171 SYIVPTK|KK 0.056 . PCHAS_1001200 172 YIVPTKK|KR 0.077 . PCHAS_1001200 173 IVPTKKK|RL 0.093 . PCHAS_1001200 174 VPTKKKR|LP 0.180 . PCHAS_1001200 191 GGSIAIR|IL 0.089 . PCHAS_1001200 198 ILQLLQK|EK 0.061 . PCHAS_1001200 200 QLLQKEK|KN 0.065 . PCHAS_1001200 201 LLQKEKK|NS 0.130 . PCHAS_1001200 213 GDANNYK|TC 0.075 . PCHAS_1001200 216 NNYKTCK|AI 0.068 . PCHAS_1001200 261 NDIASGK|DK 0.074 . PCHAS_1001200 263 IASGKDK|GC 0.091 . PCHAS_1001200 275 LDNLNIK|GC 0.063 . PCHAS_1001200 285 TLSCMLR|LK 0.090 . PCHAS_1001200 287 SCMLRLK|TP 0.064 . PCHAS_1001200 295 PFDSGNK|SF 0.054 . PCHAS_1001200 298 SGNKSFK|YF 0.076 . PCHAS_1001200 310 ITNFLSR|VA 0.097 . PCHAS_1001200 324 SSESHYK|RS 0.066 . PCHAS_1001200 325 SESHYKR|SE 0.349 . PCHAS_1001200 334 YVANICK|YD 0.056 . PCHAS_1001200 337 NICKYDK|FR 0.060 . PCHAS_1001200 339 CKYDKFR|NN 0.099 . PCHAS_1001200 345 RNNNGIK|FK 0.086 . PCHAS_1001200 347 NNGIKFK|CM 0.079 . PCHAS_1001200 354 CMSELMK|AT 0.077 . PCHAS_1001200 368 DINYMPK|NI 0.069 . PCHAS_1001200 378 ILFVHSR|DD 0.099 . PCHAS_1001200 386 DNICCYK|GT 0.057 . PCHAS_1001200 394 TVLFHSK|AK 0.063 . PCHAS_1001200 396 LFHSKAK|VK 0.070 . PCHAS_1001200 398 HSKAKVK|KN 0.072 . PCHAS_1001200 399 SKAKVKK|NN 0.166 . PCHAS_1001200 423 GNEELLK|TI 0.074 . PCHAS_1001200 433 DWISDVR|SH 0.132 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1001200 ATGGAAGAAATTGAATTGAATAATGATGAGTTAAGAAGTGCTACAGTAAGTAAATTAGAT GGCGATCCTAAGATAGGTTGGCTATGTAATAAAAATGGTCTACTTTTAAAAACATATGGG TGGGTAGTTCAAAATGCTATAGGAATTATATTGTTAATACATGGATTAAAATCTCATACT CGATTAACTTTTATGAGAATAAATTTAAAAATGCCAAATAACAATGAAGGCATAATAGTA GATACTGATAATTACTATATTTATAAAGATAGTTGGATTGAAAAATTTAATCAAAATGGT TATTCAGTATATGCACTAGATTTCCAAGGACATGGCGAATCACAATCATTAGGAAATGTA AGAGGTGATTTTAACTATTATGATGATCTAGTTGATGATGTAATACAATATATGAATCAA ATTCAAGATGAAATCGAAAATGATAACCAAACGAATGGTGACATCTCAAATGATAGTCAA ATGAATGATGAATCTTATATAGTACCAACTAAAAAAAAAAGACTTCCTATGTATATTATT GGGCATTCGATGGGAGGAAGTATTGCTATACGAATATTACAATTATTACAGAAAGAAAAA AAAAATAGCATTCAATCTGGAGATGCAAATAACTATAAAACATGTAAAGCCATATTAGAC AATTCTACTAATATTAATGAAATGGACAATGATATGTATTATATGAATAATTCTAATGGG TATGGTTCTGATAATTCCTGTGCTAGTACATCTGCTACAATAAATGATATTGCTAGTGGT AAAGATAAAGGATGTTATAATTATTTAGATAACTTAAATATTAAGGGGTGCGTAACTTTA TCTTGTATGCTGAGATTAAAAACACCATTTGATTCTGGAAACAAATCATTTAAGTATTTT TATTTGCCTATAACGAATTTCCTGTCTCGTGTCGCGCCTCATACACTAATTTCGTCGGAA TCACATTATAAAAGGTCCGAATATGTTGCTAATATATGTAAATATGATAAATTTCGAAAT AATAATGGAATAAAATTTAAATGCATGTCTGAACTTATGAAAGCAACGATCACATTGAAT GGTGATATTAATTATATGCCAAAAAATATTCCTATATTGTTTGTGCATTCAAGAGATGAT AATATTTGTTGTTATAAAGGGACAGTTTTGTTTCATAGTAAAGCAAAAGTTAAAAAAAAT AATATACATATTGTTGATGATATGGGTCATGCTATAACGTCAGAGTCAGGAAATGAAGAA CTCTTAAAAACAATTATTGATTGGATTTCTGATGTAAGAAGCCATGGTGAATATGAAGAT GAAGAAGAAGAGGAAGATGAAGATGGAATATGTTTTAATAATGCTTATATTAATTCTTGT TTTGTATTTTTATAA
  • Download Fasta

  • Fasta :-

    MEEIELNNDELRSATVSKLDGDPKIGWLCNKNGLLLKTYGWVVQNAIGIILLIHGLKSHT RLTFMRINLKMPNNNEGIIVDTDNYYIYKDSWIEKFNQNGYSVYALDFQGHGESQSLGNV RGDFNYYDDLVDDVIQYMNQIQDEIENDNQTNGDISNDSQMNDESYIVPTKKKRLPMYII GHSMGGSIAIRILQLLQKEKKNSIQSGDANNYKTCKAILDNSTNINEMDNDMYYMNNSNG YGSDNSCASTSATINDIASGKDKGCYNYLDNLNIKGCVTLSCMLRLKTPFDSGNKSFKYF YLPITNFLSRVAPHTLISSESHYKRSEYVANICKYDKFRNNNGIKFKCMSELMKATITLN GDINYMPKNIPILFVHSRDDNICCYKGTVLFHSKAKVKKNNIHIVDDMGHAITSESGNEE LLKTIIDWISDVRSHGEYEDEEEEEDEDGICFNNAYINSCFVFL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1001200377 SLFVHSRDDN0.991unspPCHAS_1001200377 SLFVHSRDDN0.991unspPCHAS_1001200377 SLFVHSRDDN0.991unspPCHAS_1001200434 SSDVRSHGEY0.996unspPCHAS_100120017 SSATVSKLDG0.995unspPCHAS_1001200259 SNDIASGKDK0.996unsp

PCHAS_100120      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India