PCHAS_1007400 | tRNA N6-adenosine threonylcarbamoyltransferase, putative

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1007400SP0.0367950.9630520.000154CS pos: 23-24. FNS-YK. Pr: 0.4841
No Results

  • Fasta :-

    >PCHAS_1007400 MKLRVSTCIVFFLLFFIPCLFNSYKIDSIKVKNLYFSDTLKGTVNKINKQFKNNNDDYDV CKYNKIPKILIDRDKIKNNDKDSGYIVGIENTCDDTCVCIIDSKLRIIKHFIISHYKVVH KYGGVYPFFISSINSVFLNHYVNKILEGIDASKIKCFGFSVCPGISQNMDTARNYIGNFK KRHKHITASSVNHVYAHVLSPLFFSFYNDENTFTNNYEYKNESTKNDDPTDHINMNLFDT IKKDKIQMDKINSVLKVLNNNDVTKTKLKTITTEDFLNYGSYILKKKKIDDNNTKLDETK NDVNQVEGNNNMGKIPFSYIKNGYICVLVSGGSTQVYRVQKDKQNDINVCKISQTVDISI GDIIDKVARLLNLPVGLGGGPFLEQESEKYIKTLNGQKINEDVSFDLFEPFPVPFAPNNK INFSFSGILNHLSKIIKELKKDKNFENEKSKYAYYCQKYIFKHLLDQLNKIMYFSELHFN IKNIFIVGGVGCNKFLFESLKNLALNRNNIENQLKEYTKLKKRLKKKIKKIENSNFLTKK NPTPNDINDEIELRSSFAWNFYLKNLLKKKTANDILLALKAFDFDSFTKLKEKGSFLLQD QFLTSSVTKPWNVYRTPINLSRDNAAMICFNTLLNMHNKTNIHEDISEIKIKSTIKTQLQ NNFLLLSDIIVFDVFLDYFDHNLA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1007400.fa Sequence name : PCHAS_1007400 Sequence length : 684 VALUES OF COMPUTED PARAMETERS Coef20 : 4.977 CoefTot : 0.077 ChDiff : 25 ZoneTo : 26 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.582 2.629 0.609 0.869 MesoH : -0.392 0.530 -0.309 0.269 MuHd_075 : 19.703 11.885 3.653 4.255 MuHd_095 : 16.119 18.588 6.393 5.445 MuHd_100 : 16.689 15.968 6.090 5.156 MuHd_105 : 18.158 17.020 6.721 4.759 Hmax_075 : 22.283 25.667 6.274 7.290 Hmax_095 : 19.425 25.550 5.201 8.488 Hmax_100 : 20.800 24.400 5.941 7.390 Hmax_105 : 21.933 22.800 4.217 7.455 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7472 0.2528 DFMC : 0.7876 0.2124
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 684 PCHAS_1007400 MKLRVSTCIVFFLLFFIPCLFNSYKIDSIKVKNLYFSDTLKGTVNKINKQFKNNNDDYDVCKYNKIPKILIDRDKIKNND 80 KDSGYIVGIENTCDDTCVCIIDSKLRIIKHFIISHYKVVHKYGGVYPFFISSINSVFLNHYVNKILEGIDASKIKCFGFS 160 VCPGISQNMDTARNYIGNFKKRHKHITASSVNHVYAHVLSPLFFSFYNDENTFTNNYEYKNESTKNDDPTDHINMNLFDT 240 IKKDKIQMDKINSVLKVLNNNDVTKTKLKTITTEDFLNYGSYILKKKKIDDNNTKLDETKNDVNQVEGNNNMGKIPFSYI 320 KNGYICVLVSGGSTQVYRVQKDKQNDINVCKISQTVDISIGDIIDKVARLLNLPVGLGGGPFLEQESEKYIKTLNGQKIN 400 EDVSFDLFEPFPVPFAPNNKINFSFSGILNHLSKIIKELKKDKNFENEKSKYAYYCQKYIFKHLLDQLNKIMYFSELHFN 480 IKNIFIVGGVGCNKFLFESLKNLALNRNNIENQLKEYTKLKKRLKKKIKKIENSNFLTKKNPTPNDINDEIELRSSFAWN 560 FYLKNLLKKKTANDILLALKAFDFDSFTKLKEKGSFLLQDQFLTSSVTKPWNVYRTPINLSRDNAAMICFNTLLNMHNKT 640 NIHEDISEIKIKSTIKTQLQNNFLLLSDIIVFDVFLDYFDHNLA 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .............................................P.................................. 560 ................................................................................ 640 ............................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1007400 2 -----MK|LR 0.053 . PCHAS_1007400 4 ---MKLR|VS 0.089 . PCHAS_1007400 25 CLFNSYK|ID 0.072 . PCHAS_1007400 30 YKIDSIK|VK 0.061 . PCHAS_1007400 32 IDSIKVK|NL 0.076 . PCHAS_1007400 41 YFSDTLK|GT 0.067 . PCHAS_1007400 46 LKGTVNK|IN 0.065 . PCHAS_1007400 49 TVNKINK|QF 0.066 . PCHAS_1007400 52 KINKQFK|NN 0.074 . PCHAS_1007400 62 DDYDVCK|YN 0.064 . PCHAS_1007400 65 DVCKYNK|IP 0.054 . PCHAS_1007400 68 KYNKIPK|IL 0.068 . PCHAS_1007400 73 PKILIDR|DK 0.088 . PCHAS_1007400 75 ILIDRDK|IK 0.064 . PCHAS_1007400 77 IDRDKIK|NN 0.072 . PCHAS_1007400 81 KIKNNDK|DS 0.084 . PCHAS_1007400 104 VCIIDSK|LR 0.054 . PCHAS_1007400 106 IIDSKLR|II 0.091 . PCHAS_1007400 109 SKLRIIK|HF 0.113 . PCHAS_1007400 117 FIISHYK|VV 0.081 . PCHAS_1007400 121 HYKVVHK|YG 0.078 . PCHAS_1007400 144 LNHYVNK|IL 0.092 . PCHAS_1007400 153 EGIDASK|IK 0.059 . PCHAS_1007400 155 IDASKIK|CF 0.078 . PCHAS_1007400 173 QNMDTAR|NY 0.113 . PCHAS_1007400 180 NYIGNFK|KR 0.061 . PCHAS_1007400 181 YIGNFKK|RH 0.099 . PCHAS_1007400 182 IGNFKKR|HK 0.292 . PCHAS_1007400 184 NFKKRHK|HI 0.073 . PCHAS_1007400 220 TNNYEYK|NE 0.089 . PCHAS_1007400 225 YKNESTK|ND 0.069 . PCHAS_1007400 242 NLFDTIK|KD 0.059 . PCHAS_1007400 243 LFDTIKK|DK 0.100 . PCHAS_1007400 245 DTIKKDK|IQ 0.072 . PCHAS_1007400 250 DKIQMDK|IN 0.061 . PCHAS_1007400 256 KINSVLK|VL 0.065 . PCHAS_1007400 265 NNNDVTK|TK 0.073 . PCHAS_1007400 267 NDVTKTK|LK 0.063 . PCHAS_1007400 269 VTKTKLK|TI 0.066 . PCHAS_1007400 285 YGSYILK|KK 0.060 . PCHAS_1007400 286 GSYILKK|KK 0.115 . PCHAS_1007400 287 SYILKKK|KI 0.124 . PCHAS_1007400 288 YILKKKK|ID 0.090 . PCHAS_1007400 295 IDDNNTK|LD 0.063 . PCHAS_1007400 300 TKLDETK|ND 0.062 . PCHAS_1007400 314 GNNNMGK|IP 0.073 . PCHAS_1007400 321 IPFSYIK|NG 0.060 . PCHAS_1007400 338 GSTQVYR|VQ 0.105 . PCHAS_1007400 341 QVYRVQK|DK 0.145 . PCHAS_1007400 343 YRVQKDK|QN 0.079 . PCHAS_1007400 351 NDINVCK|IS 0.068 . PCHAS_1007400 366 IGDIIDK|VA 0.056 . PCHAS_1007400 369 IIDKVAR|LL 0.077 . PCHAS_1007400 389 LEQESEK|YI 0.078 . PCHAS_1007400 392 ESEKYIK|TL 0.065 . PCHAS_1007400 398 KTLNGQK|IN 0.060 . PCHAS_1007400 420 PFAPNNK|IN 0.057 . PCHAS_1007400 434 ILNHLSK|II 0.070 . PCHAS_1007400 437 HLSKIIK|EL 0.068 . PCHAS_1007400 440 KIIKELK|KD 0.059 . PCHAS_1007400 441 IIKELKK|DK 0.098 . PCHAS_1007400 443 KELKKDK|NF 0.063 . PCHAS_1007400 449 KNFENEK|SK 0.076 . PCHAS_1007400 451 FENEKSK|YA 0.089 . PCHAS_1007400 458 YAYYCQK|YI 0.082 . PCHAS_1007400 462 CQKYIFK|HL 0.069 . PCHAS_1007400 470 LLDQLNK|IM 0.061 . PCHAS_1007400 482 ELHFNIK|NI 0.077 . PCHAS_1007400 494 GGVGCNK|FL 0.072 . PCHAS_1007400 501 FLFESLK|NL 0.061 . PCHAS_1007400 507 KNLALNR|NN 0.077 . PCHAS_1007400 515 NIENQLK|EY 0.060 . PCHAS_1007400 519 QLKEYTK|LK 0.058 . PCHAS_1007400 521 KEYTKLK|KR 0.057 . PCHAS_1007400 522 EYTKLKK|RL 0.087 . PCHAS_1007400 523 YTKLKKR|LK 0.153 . PCHAS_1007400 525 KLKKRLK|KK 0.067 . PCHAS_1007400 526 LKKRLKK|KI 0.502 *ProP* PCHAS_1007400 527 KKRLKKK|IK 0.125 . PCHAS_1007400 529 RLKKKIK|KI 0.082 . PCHAS_1007400 530 LKKKIKK|IE 0.093 . PCHAS_1007400 539 NSNFLTK|KN 0.062 . PCHAS_1007400 540 SNFLTKK|NP 0.090 . PCHAS_1007400 554 NDEIELR|SS 0.105 . PCHAS_1007400 564 AWNFYLK|NL 0.062 . PCHAS_1007400 568 YLKNLLK|KK 0.057 . PCHAS_1007400 569 LKNLLKK|KT 0.093 . PCHAS_1007400 570 KNLLKKK|TA 0.141 . PCHAS_1007400 580 DILLALK|AF 0.054 . PCHAS_1007400 589 DFDSFTK|LK 0.060 . PCHAS_1007400 591 DSFTKLK|EK 0.069 . PCHAS_1007400 593 FTKLKEK|GS 0.066 . PCHAS_1007400 609 LTSSVTK|PW 0.075 . PCHAS_1007400 615 KPWNVYR|TP 0.084 . PCHAS_1007400 622 TPINLSR|DN 0.117 . PCHAS_1007400 639 LLNMHNK|TN 0.074 . PCHAS_1007400 650 EDISEIK|IK 0.070 . PCHAS_1007400 652 ISEIKIK|ST 0.123 . PCHAS_1007400 656 KIKSTIK|TQ 0.057 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1007400 ATGAAATTAAGAGTATCAACATGTATTGTTTTTTTTTTGTTGTTTTTTATTCCATGTTTA TTCAATTCATACAAAATAGATAGTATAAAAGTTAAGAATTTATATTTTAGTGACACTTTA AAAGGAACAGTAAATAAAATTAATAAACAATTTAAAAATAACAATGATGATTATGATGTT TGTAAATACAACAAAATTCCCAAAATATTAATAGATAGAGATAAAATTAAAAATAATGAT AAAGATTCAGGATATATTGTTGGGATAGAAAATACTTGTGATGATACATGTGTCTGTATA ATCGATTCCAAACTTCGAATAATCAAACACTTTATTATATCCCATTATAAAGTAGTTCAC AAATATGGGGGTGTATACCCCTTTTTTATTAGCTCCATTAATAGTGTATTTTTAAACCAT TATGTGAACAAAATACTCGAAGGAATCGATGCATCAAAAATTAAATGCTTCGGATTCAGT GTCTGTCCTGGTATATCTCAGAACATGGATACAGCTAGAAATTATATAGGAAATTTCAAA AAAAGACATAAGCATATAACAGCTAGCTCAGTAAATCATGTATATGCCCATGTTTTATCG CCATTATTTTTCAGCTTTTATAATGACGAAAATACATTTACAAATAACTATGAGTATAAA AATGAAAGCACAAAGAATGATGACCCTACAGATCATATTAATATGAATCTATTTGATACT ATAAAAAAGGATAAAATCCAAATGGATAAAATAAATTCGGTTTTAAAAGTTTTAAATAAT AACGATGTAACAAAAACAAAATTAAAAACGATAACTACAGAAGATTTTTTAAATTATGGT TCATATATTTTAAAAAAAAAAAAAATTGATGATAATAATACTAAATTAGATGAAACAAAA AATGATGTAAATCAAGTAGAAGGAAATAATAATATGGGAAAAATACCATTCAGTTATATA AAAAATGGATATATTTGTGTTTTAGTTTCTGGTGGAAGTACACAAGTTTATAGAGTCCAA AAGGATAAACAAAATGACATTAATGTGTGTAAAATATCGCAAACAGTTGATATATCTATT GGTGATATAATTGATAAAGTTGCCAGGCTTCTTAATCTCCCTGTTGGTTTAGGAGGAGGA CCATTTCTTGAACAAGAATCCGAAAAATATATTAAAACATTGAATGGTCAAAAAATTAAT GAAGATGTATCATTCGATCTTTTTGAGCCATTTCCCGTCCCATTTGCTCCCAATAATAAA ATTAATTTTTCATTTTCAGGAATTTTAAACCACCTTAGTAAAATAATAAAAGAGCTAAAA AAAGACAAGAATTTCGAAAACGAAAAAAGTAAATATGCATATTATTGCCAAAAATATATA TTCAAGCATTTGCTAGATCAGCTTAATAAAATTATGTATTTTTCAGAACTGCATTTTAAT ATAAAAAACATATTCATAGTAGGAGGTGTTGGATGTAATAAATTTTTGTTTGAGAGTTTA AAAAATTTGGCATTAAATAGAAATAACATAGAAAATCAATTAAAAGAATATACTAAATTA AAAAAACGATTAAAAAAAAAAATAAAAAAAATTGAAAATAGTAATTTTTTAACAAAAAAA AATCCAACACCAAATGATATAAATGATGAAATTGAATTACGTTCGTCTTTTGCTTGGAAT TTTTATTTAAAAAATCTTTTAAAAAAAAAAACAGCAAATGATATTTTATTAGCCCTAAAA GCCTTTGATTTTGATTCCTTTACAAAACTCAAAGAGAAGGGTTCCTTTTTATTACAGGAT CAGTTTCTCACGTCTTCAGTAACAAAACCATGGAATGTCTATAGAACCCCCATAAATCTT AGTCGGGATAATGCGGCAATGATTTGCTTTAACACACTCTTAAATATGCACAACAAAACA AACATCCACGAAGATATTTCTGAGATTAAAATTAAGTCGACTATAAAAACGCAGCTTCAA AACAATTTCCTTCTTTTATCCGATATAATTGTTTTTGATGTATTTTTAGATTATTTTGAT CATAACTTGGCATAA
  • Download Fasta

  • Fasta :-

    MKLRVSTCIVFFLLFFIPCLFNSYKIDSIKVKNLYFSDTLKGTVNKINKQFKNNNDDYDV CKYNKIPKILIDRDKIKNNDKDSGYIVGIENTCDDTCVCIIDSKLRIIKHFIISHYKVVH KYGGVYPFFISSINSVFLNHYVNKILEGIDASKIKCFGFSVCPGISQNMDTARNYIGNFK KRHKHITASSVNHVYAHVLSPLFFSFYNDENTFTNNYEYKNESTKNDDPTDHINMNLFDT IKKDKIQMDKINSVLKVLNNNDVTKTKLKTITTEDFLNYGSYILKKKKIDDNNTKLDETK NDVNQVEGNNNMGKIPFSYIKNGYICVLVSGGSTQVYRVQKDKQNDINVCKISQTVDISI GDIIDKVARLLNLPVGLGGGPFLEQESEKYIKTLNGQKINEDVSFDLFEPFPVPFAPNNK INFSFSGILNHLSKIIKELKKDKNFENEKSKYAYYCQKYIFKHLLDQLNKIMYFSELHFN IKNIFIVGGVGCNKFLFESLKNLALNRNNIENQLKEYTKLKKRLKKKIKKIENSNFLTKK NPTPNDINDEIELRSSFAWNFYLKNLLKKKTANDILLALKAFDFDSFTKLKEKGSFLLQD QFLTSSVTKPWNVYRTPINLSRDNAAMICFNTLLNMHNKTNIHEDISEIKIKSTIKTQLQ NNFLLLSDIIVFDVFLDYFDHNLA

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_1007400223 SYKNESTKND0.997unsp

PCHAS_100740      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India