PCHAS_1020100 | enoyl-CoA hydratase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      

  • Computed_GO_Functions:  catalytic activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1020100OTHER0.8059390.0003610.193700
No Results

  • Fasta :-

    >PCHAS_1020100 MGIQKMFFLTRCGKQPYSNINIRRNFKLLNTFKQYTTYLNKEENLNNSSQLIDEKNDNIN LCNKYVDFFRDESRNIGIVTFKNICDKKNIFPNFLEELKNVIDHINNIISNEENNKFYIN EFKNKDNYLVKNLKKAIPYYDNKLKVLIINGSDTNFKKNNNTFLNSVDFNSYLKCDEGTN ADISSMFRIICNNIQQLPLITVSNINGICYNSGMDLILSTDFRISNENSKYGYDKTYIGL YPYGGSIQKLFRHIPMNYSKYLLLTSQTINAFDALKFNLIDVCLNQNEEFYINNSNVHFD HNLTKKNKIEIIKENIIKYFNDIFINENFKLKTNDDSFIFTLFFAFQFLFTPTYILQNIK LSINEGMLLSDSNAYLDCDRMVFEKSINTPERLEILNYLKTKVSEYKPKEN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1020100.fa Sequence name : PCHAS_1020100 Sequence length : 411 VALUES OF COMPUTED PARAMETERS Coef20 : 3.763 CoefTot : -1.919 ChDiff : 4 ZoneTo : 41 KR : 8 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.124 1.571 0.183 0.718 MesoH : -0.700 0.253 -0.389 0.218 MuHd_075 : 31.576 20.428 11.531 7.906 MuHd_095 : 25.096 14.267 7.117 5.923 MuHd_100 : 33.995 23.731 9.021 8.336 MuHd_105 : 39.958 28.170 11.317 10.597 Hmax_075 : 13.400 10.100 3.286 4.650 Hmax_095 : -0.100 5.500 3.150 2.220 Hmax_100 : 11.600 14.500 1.196 5.070 Hmax_105 : 9.700 13.900 0.034 5.380 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2495 0.7505 DFMC : 0.1221 0.8779 This protein is probably imported in mitochondria. f(Ser) = 0.0244 f(Arg) = 0.0732 CMi = 0.14144 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 411 PCHAS_1020100 MGIQKMFFLTRCGKQPYSNINIRRNFKLLNTFKQYTTYLNKEENLNNSSQLIDEKNDNINLCNKYVDFFRDESRNIGIVT 80 FKNICDKKNIFPNFLEELKNVIDHINNIISNEENNKFYINEFKNKDNYLVKNLKKAIPYYDNKLKVLIINGSDTNFKKNN 160 NTFLNSVDFNSYLKCDEGTNADISSMFRIICNNIQQLPLITVSNINGICYNSGMDLILSTDFRISNENSKYGYDKTYIGL 240 YPYGGSIQKLFRHIPMNYSKYLLLTSQTINAFDALKFNLIDVCLNQNEEFYINNSNVHFDHNLTKKNKIEIIKENIIKYF 320 NDIFINENFKLKTNDDSFIFTLFFAFQFLFTPTYILQNIKLSINEGMLLSDSNAYLDCDRMVFEKSINTPERLEILNYLK 400 TKVSEYKPKEN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1020100 5 --MGIQK|MF 0.059 . PCHAS_1020100 11 KMFFLTR|CG 0.079 . PCHAS_1020100 14 FLTRCGK|QP 0.093 . PCHAS_1020100 23 YSNINIR|RN 0.118 . PCHAS_1020100 24 SNINIRR|NF 0.125 . PCHAS_1020100 27 NIRRNFK|LL 0.107 . PCHAS_1020100 33 KLLNTFK|QY 0.067 . PCHAS_1020100 41 YTTYLNK|EE 0.052 . PCHAS_1020100 55 SQLIDEK|ND 0.061 . PCHAS_1020100 64 NINLCNK|YV 0.084 . PCHAS_1020100 70 KYVDFFR|DE 0.109 . PCHAS_1020100 74 FFRDESR|NI 0.109 . PCHAS_1020100 82 IGIVTFK|NI 0.073 . PCHAS_1020100 87 FKNICDK|KN 0.059 . PCHAS_1020100 88 KNICDKK|NI 0.117 . PCHAS_1020100 99 NFLEELK|NV 0.067 . PCHAS_1020100 116 SNEENNK|FY 0.069 . PCHAS_1020100 123 FYINEFK|NK 0.062 . PCHAS_1020100 125 INEFKNK|DN 0.077 . PCHAS_1020100 131 KDNYLVK|NL 0.075 . PCHAS_1020100 134 YLVKNLK|KA 0.065 . PCHAS_1020100 135 LVKNLKK|AI 0.092 . PCHAS_1020100 143 IPYYDNK|LK 0.061 . PCHAS_1020100 145 YYDNKLK|VL 0.062 . PCHAS_1020100 157 GSDTNFK|KN 0.059 . PCHAS_1020100 158 SDTNFKK|NN 0.114 . PCHAS_1020100 174 DFNSYLK|CD 0.057 . PCHAS_1020100 188 DISSMFR|II 0.107 . PCHAS_1020100 223 ILSTDFR|IS 0.091 . PCHAS_1020100 230 ISNENSK|YG 0.070 . PCHAS_1020100 235 SKYGYDK|TY 0.067 . PCHAS_1020100 249 YGGSIQK|LF 0.059 . PCHAS_1020100 252 SIQKLFR|HI 0.095 . PCHAS_1020100 260 IPMNYSK|YL 0.064 . PCHAS_1020100 276 NAFDALK|FN 0.056 . PCHAS_1020100 305 FDHNLTK|KN 0.064 . PCHAS_1020100 306 DHNLTKK|NK 0.107 . PCHAS_1020100 308 NLTKKNK|IE 0.069 . PCHAS_1020100 313 NKIEIIK|EN 0.062 . PCHAS_1020100 318 IKENIIK|YF 0.079 . PCHAS_1020100 330 FINENFK|LK 0.057 . PCHAS_1020100 332 NENFKLK|TN 0.073 . PCHAS_1020100 360 YILQNIK|LS 0.057 . PCHAS_1020100 380 AYLDCDR|MV 0.086 . PCHAS_1020100 385 DRMVFEK|SI 0.113 . PCHAS_1020100 392 SINTPER|LE 0.079 . PCHAS_1020100 400 EILNYLK|TK 0.051 . PCHAS_1020100 402 LNYLKTK|VS 0.069 . PCHAS_1020100 407 TKVSEYK|PK 0.074 . PCHAS_1020100 409 VSEYKPK|EN 0.076 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1020100 ATGGGAATACAAAAAATGTTTTTTTTAACACGATGTGGGAAACAACCTTATTCAAATATA AACATAAGAAGGAACTTCAAACTGCTCAATACATTTAAACAGTATACAACTTATTTGAAT AAAGAAGAAAACCTAAATAATAGTTCTCAATTAATTGATGAGAAAAATGATAATATAAAT TTGTGTAATAAATATGTTGACTTTTTTAGAGATGAAAGTAGAAATATTGGGATAGTTACT TTTAAAAATATATGTGATAAAAAAAATATATTTCCTAATTTTTTAGAAGAATTGAAAAAT GTTATAGATCATATAAATAATATCATATCTAATGAAGAAAATAATAAATTCTATATCAAC GAATTTAAAAATAAGGATAATTATTTAGTTAAAAATTTGAAAAAAGCAATACCATATTAT GACAATAAATTAAAAGTATTAATCATTAATGGGAGTGACACCAACTTTAAAAAAAATAAT AATACATTCTTAAATTCAGTTGATTTTAATTCCTATTTAAAATGTGATGAAGGAACTAAT GCTGATATCTCAAGTATGTTTAGAATAATCTGCAATAATATTCAACAACTACCTTTAATA ACCGTTAGCAATATTAATGGCATTTGTTACAACAGTGGTATGGACTTAATTTTGTCAACC GATTTTAGAATCTCAAATGAAAATAGTAAATATGGATATGATAAAACTTATATTGGTTTA TATCCATATGGTGGTAGTATACAAAAACTATTTAGACATATTCCTATGAATTATTCAAAA TATTTATTATTAACAAGTCAGACAATTAATGCATTTGATGCATTAAAATTTAATTTAATA GATGTATGCCTAAATCAAAATGAAGAATTTTATATAAATAATTCGAATGTTCATTTTGAT CATAATTTAACTAAAAAAAATAAAATCGAAATTATAAAAGAAAATATTATAAAATATTTC AATGATATTTTCATAAATGAAAATTTTAAATTAAAAACAAATGATGATAGCTTTATTTTT ACACTTTTTTTTGCTTTTCAATTTTTATTTACCCCTACTTATATTCTACAAAATATCAAA CTCTCTATCAATGAAGGAATGCTACTAAGCGATTCAAATGCATATTTAGATTGCGACCGA ATGGTATTCGAAAAATCTATAAATACACCTGAACGATTAGAAATACTAAATTATTTAAAA ACAAAAGTAAGCGAATACAAACCGAAGGAAAATTAA
  • Download Fasta

  • Fasta :-

    MGIQKMFFLTRCGKQPYSNINIRRNFKLLNTFKQYTTYLNKEENLNNSSQLIDEKNDNIN LCNKYVDFFRDESRNIGIVTFKNICDKKNIFPNFLEELKNVIDHINNIISNEENNKFYIN EFKNKDNYLVKNLKKAIPYYDNKLKVLIINGSDTNFKKNNNTFLNSVDFNSYLKCDEGTN ADISSMFRIICNNIQQLPLITVSNINGICYNSGMDLILSTDFRISNENSKYGYDKTYIGL YPYGGSIQKLFRHIPMNYSKYLLLTSQTINAFDALKFNLIDVCLNQNEEFYINNSNVHFD HNLTKKNKIEIIKENIIKYFNDIFINENFKLKTNDDSFIFTLFFAFQFLFTPTYILQNIK LSINEGMLLSDSNAYLDCDRMVFEKSINTPERLEILNYLKTKVSEYKPKEN

  • title: trimer interface
  • coordinates: N192,I200,D221,F222,R223,I224,T236,Y237,I238,G239,G245,I247,Q248,K249,F251,R252,N257,Y258,K260,Y261,L263,L264,Q267,N278,D281
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_1020100225 SDFRISNENS0.997unsp

PCHAS_102010      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India