PCHAS_1033200 | alpha/beta hydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1033200OTHER0.9994350.0001400.000425
No Results

  • Fasta :-

    >PCHAS_1033200 MLSSNEILNEYVTCSKGITYAVYSNNLIQKNKTLNNETALNENNNQSNNQKAIVLLLHGL NGGTHQFANIFKTLFDLDYQFISIDFYGHGNSSLFGNPNKYTEKLYTEQIYDVLKTKSLL NEKFIVIGFSMGCIIATHLSKDNKINIGKFCLISAAGMAKPRYRFLVFLLKYNIRLCLKL AKRYSRSVISEDTVKKEYYNFEKNFEEAAKQYEILKQNHEKFMETFLKVLIGIKLQNSKK YYFSLFKTNADVLFIYGKNDALTSYIYTQKFLEQKKEYSKNVKMIIIPECCHLVIHEKSH ELDHHLIYFLK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1033200.fa Sequence name : PCHAS_1033200 Sequence length : 311 VALUES OF COMPUTED PARAMETERS Coef20 : 3.816 CoefTot : 0.212 ChDiff : 12 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.976 1.853 0.359 0.700 MesoH : -0.662 0.549 -0.369 0.212 MuHd_075 : 28.196 20.672 8.832 5.983 MuHd_095 : 17.502 11.994 7.127 3.241 MuHd_100 : 25.526 16.153 9.128 4.600 MuHd_105 : 29.998 19.169 9.868 5.746 Hmax_075 : 15.050 16.537 3.384 5.556 Hmax_095 : 10.100 9.100 3.005 3.620 Hmax_100 : 12.900 12.400 3.747 4.440 Hmax_105 : 14.300 15.100 4.002 4.910 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8451 0.1549 DFMC : 0.7798 0.2202
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 311 PCHAS_1033200 MLSSNEILNEYVTCSKGITYAVYSNNLIQKNKTLNNETALNENNNQSNNQKAIVLLLHGLNGGTHQFANIFKTLFDLDYQ 80 FISIDFYGHGNSSLFGNPNKYTEKLYTEQIYDVLKTKSLLNEKFIVIGFSMGCIIATHLSKDNKINIGKFCLISAAGMAK 160 PRYRFLVFLLKYNIRLCLKLAKRYSRSVISEDTVKKEYYNFEKNFEEAAKQYEILKQNHEKFMETFLKVLIGIKLQNSKK 240 YYFSLFKTNADVLFIYGKNDALTSYIYTQKFLEQKKEYSKNVKMIIIPECCHLVIHEKSHELDHHLIYFLK 320 ................................................................................ 80 ................................................................................ 160 .........................P...................................................... 240 ....................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1033200 16 EYVTCSK|GI 0.062 . PCHAS_1033200 30 SNNLIQK|NK 0.066 . PCHAS_1033200 32 NLIQKNK|TL 0.065 . PCHAS_1033200 51 NQSNNQK|AI 0.077 . PCHAS_1033200 72 QFANIFK|TL 0.070 . PCHAS_1033200 100 LFGNPNK|YT 0.076 . PCHAS_1033200 104 PNKYTEK|LY 0.064 . PCHAS_1033200 115 QIYDVLK|TK 0.059 . PCHAS_1033200 117 YDVLKTK|SL 0.077 . PCHAS_1033200 123 KSLLNEK|FI 0.069 . PCHAS_1033200 141 IATHLSK|DN 0.069 . PCHAS_1033200 144 HLSKDNK|IN 0.075 . PCHAS_1033200 149 NKINIGK|FC 0.065 . PCHAS_1033200 160 SAAGMAK|PR 0.067 . PCHAS_1033200 162 AGMAKPR|YR 0.095 . PCHAS_1033200 164 MAKPRYR|FL 0.105 . PCHAS_1033200 171 FLVFLLK|YN 0.056 . PCHAS_1033200 175 LLKYNIR|LC 0.070 . PCHAS_1033200 179 NIRLCLK|LA 0.059 . PCHAS_1033200 182 LCLKLAK|RY 0.066 . PCHAS_1033200 183 CLKLAKR|YS 0.155 . PCHAS_1033200 186 LAKRYSR|SV 0.558 *ProP* PCHAS_1033200 195 ISEDTVK|KE 0.056 . PCHAS_1033200 196 SEDTVKK|EY 0.102 . PCHAS_1033200 203 EYYNFEK|NF 0.069 . PCHAS_1033200 210 NFEEAAK|QY 0.069 . PCHAS_1033200 216 KQYEILK|QN 0.066 . PCHAS_1033200 221 LKQNHEK|FM 0.095 . PCHAS_1033200 228 FMETFLK|VL 0.064 . PCHAS_1033200 234 KVLIGIK|LQ 0.053 . PCHAS_1033200 239 IKLQNSK|KY 0.059 . PCHAS_1033200 240 KLQNSKK|YY 0.127 . PCHAS_1033200 247 YYFSLFK|TN 0.061 . PCHAS_1033200 258 VLFIYGK|ND 0.053 . PCHAS_1033200 270 SYIYTQK|FL 0.076 . PCHAS_1033200 275 QKFLEQK|KE 0.058 . PCHAS_1033200 276 KFLEQKK|EY 0.114 . PCHAS_1033200 280 QKKEYSK|NV 0.068 . PCHAS_1033200 283 EYSKNVK|MI 0.076 . PCHAS_1033200 298 HLVIHEK|SH 0.076 . PCHAS_1033200 311 HLIYFLK|-- 0.067 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1033200 ATGCTTTCCTCAAATGAAATATTGAATGAATATGTTACATGCTCAAAGGGAATTACATAT GCAGTTTATTCTAACAATTTAATTCAAAAAAATAAAACATTAAATAATGAAACTGCATTA AATGAAAATAATAATCAGTCTAATAATCAAAAGGCTATTGTACTCCTTTTACATGGATTA AATGGAGGAACTCATCAATTTGCAAATATATTCAAAACATTATTTGATCTTGACTATCAA TTTATATCCATAGATTTTTATGGCCATGGGAATAGTAGCTTGTTTGGAAATCCAAACAAA TACACTGAAAAGCTATACACGGAACAAATTTACGATGTTTTAAAAACAAAAAGTCTTTTA AACGAAAAATTTATAGTTATTGGCTTTTCTATGGGATGCATTATAGCTACGCATTTGTCT AAGGATAATAAAATAAACATAGGCAAATTTTGCCTTATTAGTGCTGCTGGAATGGCTAAA CCTAGATATCGATTTTTGGTTTTTTTATTAAAATATAACATACGTCTTTGTCTAAAATTA GCAAAACGATATAGTCGCTCGGTCATTTCTGAGGACACAGTTAAAAAAGAATATTACAAT TTCGAGAAGAATTTCGAAGAAGCCGCAAAACAATATGAAATCCTTAAACAGAATCATGAA AAATTCATGGAGACATTTTTAAAGGTATTGATAGGAATTAAATTACAAAATTCTAAGAAG TATTATTTTTCGTTGTTCAAAACAAATGCCGATGTCCTTTTCATATATGGAAAAAATGAT GCCTTAACATCCTATATATATACCCAGAAATTTTTAGAACAAAAAAAGGAATATTCAAAA AATGTGAAAATGATAATTATACCAGAATGTTGTCATCTTGTTATACATGAAAAATCTCAT GAATTAGATCACCATCTTATTTATTTTTTGAAATAA
  • Download Fasta

  • Fasta :-

    MLSSNEILNEYVTCSKGITYAVYSNNLIQKNKTLNNETALNENNNQSNNQKAIVLLLHGL NGGTHQFANIFKTLFDLDYQFISIDFYGHGNSSLFGNPNKYTEKLYTEQIYDVLKTKSLL NEKFIVIGFSMGCIIATHLSKDNKINIGKFCLISAAGMAKPRYRFLVFLLKYNIRLCLKL AKRYSRSVISEDTVKKEYYNFEKNFEEAAKQYEILKQNHEKFMETFLKVLIGIKLQNSKK YYFSLFKTNADVLFIYGKNDALTSYIYTQKFLEQKKEYSKNVKMIIIPECCHLVIHEKSH ELDHHLIYFLK

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PCHAS_103320      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India