PCHAS_1034000 | DNA damage-inducible protein 1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1034000OTHER0.9999860.0000140.000001
No Results

  • Fasta :-

    >PCHAS_1034000 MVFITISDDNNIITSLDLHEDTEMSIIMSIIENDFSLNMNINELTYNGKAVDKSDTLKKL NMHEGDLLFIRKKINLDMLQEELNANGFGNIMNNSGVTNTSATNSSTPNPGSILPSGLNN AGQGNNAAFNGILEQFRIFQEMEYIKKEAEKLLQLKTDKAKMSILQIQDKKLYDAINTAN LEEIKKIVKEKYEMEKKEKQREQEMYEKALKDPLSEESQKYIYEHIYKNQINSNLALAQE HFPEAFGVVYMLYIPVEINKNVIHAFVDSGAQTSIISKRCAEKCNILRLMDTRFTGIAKG VGTKSILGKIHMIDIKIGNYFYAVALTIIDDYDIDFIFGLDLLKRHQCSIDLKKNALVIE DNEIPFLAEKDIVKRSFESINLDSQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1034000.fa Sequence name : PCHAS_1034000 Sequence length : 385 VALUES OF COMPUTED PARAMETERS Coef20 : 3.773 CoefTot : 0.112 ChDiff : -12 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.706 1.312 -0.024 0.625 MesoH : -0.689 0.480 -0.365 0.235 MuHd_075 : 9.266 11.104 1.603 3.151 MuHd_095 : 7.082 4.718 0.879 1.023 MuHd_100 : 3.663 8.770 1.776 2.106 MuHd_105 : 6.778 12.486 3.536 3.244 Hmax_075 : 5.483 13.100 0.112 4.700 Hmax_095 : 7.200 10.588 0.196 3.911 Hmax_100 : 7.200 17.300 1.871 5.450 Hmax_105 : 7.117 21.000 2.280 6.417 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9529 0.0471 DFMC : 0.9708 0.0292
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 385 PCHAS_1034000 MVFITISDDNNIITSLDLHEDTEMSIIMSIIENDFSLNMNINELTYNGKAVDKSDTLKKLNMHEGDLLFIRKKINLDMLQ 80 EELNANGFGNIMNNSGVTNTSATNSSTPNPGSILPSGLNNAGQGNNAAFNGILEQFRIFQEMEYIKKEAEKLLQLKTDKA 160 KMSILQIQDKKLYDAINTANLEEIKKIVKEKYEMEKKEKQREQEMYEKALKDPLSEESQKYIYEHIYKNQINSNLALAQE 240 HFPEAFGVVYMLYIPVEINKNVIHAFVDSGAQTSIISKRCAEKCNILRLMDTRFTGIAKGVGTKSILGKIHMIDIKIGNY 320 FYAVALTIIDDYDIDFIFGLDLLKRHQCSIDLKKNALVIEDNEIPFLAEKDIVKRSFESINLDSQ 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1034000 49 ELTYNGK|AV 0.080 . PCHAS_1034000 53 NGKAVDK|SD 0.072 . PCHAS_1034000 58 DKSDTLK|KL 0.076 . PCHAS_1034000 59 KSDTLKK|LN 0.109 . PCHAS_1034000 71 GDLLFIR|KK 0.072 . PCHAS_1034000 72 DLLFIRK|KI 0.073 . PCHAS_1034000 73 LLFIRKK|IN 0.103 . PCHAS_1034000 137 GILEQFR|IF 0.084 . PCHAS_1034000 146 QEMEYIK|KE 0.061 . PCHAS_1034000 147 EMEYIKK|EA 0.111 . PCHAS_1034000 151 IKKEAEK|LL 0.064 . PCHAS_1034000 156 EKLLQLK|TD 0.059 . PCHAS_1034000 159 LQLKTDK|AK 0.064 . PCHAS_1034000 161 LKTDKAK|MS 0.072 . PCHAS_1034000 170 ILQIQDK|KL 0.082 . PCHAS_1034000 171 LQIQDKK|LY 0.103 . PCHAS_1034000 185 ANLEEIK|KI 0.060 . PCHAS_1034000 186 NLEEIKK|IV 0.123 . PCHAS_1034000 189 EIKKIVK|EK 0.060 . PCHAS_1034000 191 KKIVKEK|YE 0.077 . PCHAS_1034000 196 EKYEMEK|KE 0.063 . PCHAS_1034000 197 KYEMEKK|EK 0.092 . PCHAS_1034000 199 EMEKKEK|QR 0.071 . PCHAS_1034000 201 EKKEKQR|EQ 0.127 . PCHAS_1034000 208 EQEMYEK|AL 0.062 . PCHAS_1034000 211 MYEKALK|DP 0.064 . PCHAS_1034000 220 LSEESQK|YI 0.072 . PCHAS_1034000 228 IYEHIYK|NQ 0.058 . PCHAS_1034000 260 IPVEINK|NV 0.081 . PCHAS_1034000 278 QTSIISK|RC 0.059 . PCHAS_1034000 279 TSIISKR|CA 0.376 . PCHAS_1034000 283 SKRCAEK|CN 0.068 . PCHAS_1034000 288 EKCNILR|LM 0.082 . PCHAS_1034000 293 LRLMDTR|FT 0.134 . PCHAS_1034000 299 RFTGIAK|GV 0.085 . PCHAS_1034000 304 AKGVGTK|SI 0.097 . PCHAS_1034000 309 TKSILGK|IH 0.084 . PCHAS_1034000 316 IHMIDIK|IG 0.057 . PCHAS_1034000 344 FGLDLLK|RH 0.052 . PCHAS_1034000 345 GLDLLKR|HQ 0.129 . PCHAS_1034000 353 QCSIDLK|KN 0.065 . PCHAS_1034000 354 CSIDLKK|NA 0.134 . PCHAS_1034000 370 IPFLAEK|DI 0.063 . PCHAS_1034000 374 AEKDIVK|RS 0.058 . PCHAS_1034000 375 EKDIVKR|SF 0.287 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1034000 ATGGTGTTCATAACGATATCTGATGATAATAATATAATAACCAGTCTAGATTTGCATGAA GATACTGAAATGTCTATAATAATGAGCATAATTGAAAATGATTTTTCTCTTAATATGAAT ATAAATGAATTAACGTATAATGGAAAGGCTGTAGATAAATCAGATACTTTAAAAAAATTG AACATGCATGAAGGTGATCTTTTATTTATCCGAAAAAAAATTAATCTTGATATGTTACAA GAAGAATTAAATGCAAACGGGTTTGGAAATATTATGAACAATAGTGGTGTCACTAACACA TCAGCTACTAATAGTAGTACACCCAATCCAGGGAGTATACTTCCAAGTGGTTTGAATAAT GCAGGGCAAGGTAATAACGCTGCATTTAATGGGATCTTGGAGCAGTTTCGAATTTTTCAA GAAATGGAATATATAAAAAAAGAAGCTGAAAAATTATTGCAATTAAAAACAGATAAAGCA AAGATGAGCATATTACAAATTCAAGATAAAAAATTATATGATGCTATAAATACTGCAAAT CTAGAAGAAATAAAAAAAATAGTAAAAGAAAAATATGAAATGGAAAAAAAAGAAAAACAA AGAGAACAAGAAATGTATGAAAAAGCATTAAAAGACCCACTATCTGAGGAATCACAAAAA TATATATATGAACATATATATAAAAATCAAATAAATTCAAATCTCGCATTAGCACAGGAG CATTTTCCTGAAGCATTTGGTGTAGTATATATGTTATATATACCTGTTGAAATAAATAAA AATGTTATACATGCATTTGTTGATTCAGGGGCACAAACAAGTATTATATCAAAAAGGTGT GCAGAAAAATGTAACATTCTAAGATTAATGGATACACGATTTACTGGTATAGCTAAAGGA GTTGGAACAAAATCTATACTAGGAAAAATACACATGATTGATATTAAAATTGGAAATTAT TTCTATGCTGTTGCATTAACTATAATAGATGATTATGATATCGATTTTATATTCGGTCTA GATTTATTAAAAAGACATCAATGCTCAATTGATTTGAAGAAAAATGCTTTAGTTATCGAA GATAATGAAATACCATTTCTGGCTGAAAAAGATATAGTCAAACGATCATTTGAAAGCATA AATTTAGACTCACAATAG
  • Download Fasta

  • Fasta :-

    MVFITISDDNNIITSLDLHEDTEMSIIMSIIENDFSLNMNINELTYNGKAVDKSDTLKKL NMHEGDLLFIRKKINLDMLQEELNANGFGNIMNNSGVTNTSATNSSTPNPGSILPSGLNN AGQGNNAAFNGILEQFRIFQEMEYIKKEAEKLLQLKTDKAKMSILQIQDKKLYDAINTAN LEEIKKIVKEKYEMEKKEKQREQEMYEKALKDPLSEESQKYIYEHIYKNQINSNLALAQE HFPEAFGVVYMLYIPVEINKNVIHAFVDSGAQTSIISKRCAEKCNILRLMDTRFTGIAKG VGTKSILGKIHMIDIKIGNYFYAVALTIIDDYDIDFIFGLDLLKRHQCSIDLKKNALVIE DNEIPFLAEKDIVKRSFESINLDSQ

  • title: catalytic motif
  • coordinates: D268,S269,G270
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_1034000215 SKDPLSEESQ0.995unsp

PCHAS_103400      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India