PCHAS_1035200 | plasmepsin IV, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1035200OTHER0.9997810.0001510.000068
No Results

  • Fasta :-

    >PCHAS_1035200 MEYSEKEPNYSNGLMRNGSAFGHLKFDNMKSFKIQKKFQALYFIIFVCIIGSIFAYLVGS NYYGSKTDIDKIIANSNYLTIRGKLERPRDKLIKKVMNKNISNYIKESFKLLKSGLLKRE HLVKNTDGIELDQVVGLMFYGTGEIGDNKQSFAFILDTGSSNLWVPSKACKSEGCSYKHT YDSEKSHTYEKDGTPVSIVYGSGGIKGFFSNDIFTLGHHTIPYKFIEVTQTDDLEPIYSG SPFDGILGLGWKSLAVGSVEPAIVEMKKKGQIENALFSFYFPAAEDANGYFTIGGIEESF YTGDITYEKLTNESYWQIQLDVAFGSVTLDNASIIVDSGTSAITAPSDFLDKFFNTITSI PVPFLPLRVVLCDDKTLPVLKFTSKGATYTIEPQQYLFDLDPTGGLCLIGITDVDIDAST FILGDVFFKKYYTIFDYDNERVGFALAKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1035200.fa Sequence name : PCHAS_1035200 Sequence length : 449 VALUES OF COMPUTED PARAMETERS Coef20 : 3.062 CoefTot : 0.000 ChDiff : -9 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.359 2.618 0.593 0.932 MesoH : -0.144 0.607 -0.226 0.316 MuHd_075 : 32.210 15.920 8.958 6.025 MuHd_095 : 25.157 11.912 7.403 4.509 MuHd_100 : 35.669 16.085 9.488 6.027 MuHd_105 : 36.381 16.625 9.111 6.336 Hmax_075 : 0.467 -0.817 -1.884 1.480 Hmax_095 : -0.500 -1.100 -2.147 1.820 Hmax_100 : 4.000 -1.100 -2.147 1.380 Hmax_105 : 2.975 0.438 -1.816 1.645 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9780 0.0220 DFMC : 0.9740 0.0260
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 449 PCHAS_1035200 MEYSEKEPNYSNGLMRNGSAFGHLKFDNMKSFKIQKKFQALYFIIFVCIIGSIFAYLVGSNYYGSKTDIDKIIANSNYLT 80 IRGKLERPRDKLIKKVMNKNISNYIKESFKLLKSGLLKREHLVKNTDGIELDQVVGLMFYGTGEIGDNKQSFAFILDTGS 160 SNLWVPSKACKSEGCSYKHTYDSEKSHTYEKDGTPVSIVYGSGGIKGFFSNDIFTLGHHTIPYKFIEVTQTDDLEPIYSG 240 SPFDGILGLGWKSLAVGSVEPAIVEMKKKGQIENALFSFYFPAAEDANGYFTIGGIEESFYTGDITYEKLTNESYWQIQL 320 DVAFGSVTLDNASIIVDSGTSAITAPSDFLDKFFNTITSIPVPFLPLRVVLCDDKTLPVLKFTSKGATYTIEPQQYLFDL 400 DPTGGLCLIGITDVDIDASTFILGDVFFKKYYTIFDYDNERVGFALAKN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1035200 6 -MEYSEK|EP 0.057 . PCHAS_1035200 16 YSNGLMR|NG 0.131 . PCHAS_1035200 25 SAFGHLK|FD 0.063 . PCHAS_1035200 30 LKFDNMK|SF 0.080 . PCHAS_1035200 33 DNMKSFK|IQ 0.065 . PCHAS_1035200 36 KSFKIQK|KF 0.063 . PCHAS_1035200 37 SFKIQKK|FQ 0.108 . PCHAS_1035200 66 SNYYGSK|TD 0.066 . PCHAS_1035200 71 SKTDIDK|II 0.062 . PCHAS_1035200 82 SNYLTIR|GK 0.087 . PCHAS_1035200 84 YLTIRGK|LE 0.057 . PCHAS_1035200 87 IRGKLER|PR 0.103 . PCHAS_1035200 89 GKLERPR|DK 0.100 . PCHAS_1035200 91 LERPRDK|LI 0.070 . PCHAS_1035200 94 PRDKLIK|KV 0.084 . PCHAS_1035200 95 RDKLIKK|VM 0.089 . PCHAS_1035200 99 IKKVMNK|NI 0.076 . PCHAS_1035200 106 NISNYIK|ES 0.079 . PCHAS_1035200 110 YIKESFK|LL 0.062 . PCHAS_1035200 113 ESFKLLK|SG 0.073 . PCHAS_1035200 118 LKSGLLK|RE 0.064 . PCHAS_1035200 119 KSGLLKR|EH 0.134 . PCHAS_1035200 124 KREHLVK|NT 0.090 . PCHAS_1035200 149 GEIGDNK|QS 0.062 . PCHAS_1035200 168 NLWVPSK|AC 0.066 . PCHAS_1035200 171 VPSKACK|SE 0.121 . PCHAS_1035200 178 SEGCSYK|HT 0.103 . PCHAS_1035200 185 HTYDSEK|SH 0.080 . PCHAS_1035200 191 KSHTYEK|DG 0.070 . PCHAS_1035200 206 YGSGGIK|GF 0.062 . PCHAS_1035200 224 HHTIPYK|FI 0.077 . PCHAS_1035200 252 ILGLGWK|SL 0.071 . PCHAS_1035200 267 PAIVEMK|KK 0.085 . PCHAS_1035200 268 AIVEMKK|KG 0.085 . PCHAS_1035200 269 IVEMKKK|GQ 0.104 . PCHAS_1035200 309 GDITYEK|LT 0.062 . PCHAS_1035200 352 PSDFLDK|FF 0.066 . PCHAS_1035200 368 VPFLPLR|VV 0.089 . PCHAS_1035200 375 VVLCDDK|TL 0.053 . PCHAS_1035200 381 KTLPVLK|FT 0.081 . PCHAS_1035200 385 VLKFTSK|GA 0.069 . PCHAS_1035200 429 LGDVFFK|KY 0.067 . PCHAS_1035200 430 GDVFFKK|YY 0.111 . PCHAS_1035200 441 FDYDNER|VG 0.069 . PCHAS_1035200 448 VGFALAK|N- 0.066 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1035200 ATGGAATATTCCGAAAAAGAACCAAACTACTCCAACGGGCTGATGCGAAACGGTTCGGCT TTTGGGCACTTAAAATTTGATAATATGAAAAGCTTTAAAATTCAAAAAAAATTTCAAGCA TTATATTTTATCATATTTGTTTGCATAATTGGATCCATATTTGCATATTTGGTCGGAAGT AACTATTATGGCTCCAAAACCGATATAGATAAAATTATTGCAAATTCCAATTATTTAACA ATTCGTGGAAAACTTGAAAGACCACGTGATAAATTAATAAAAAAAGTTATGAACAAAAAT ATATCTAATTACATTAAAGAATCATTTAAATTATTAAAATCCGGTTTATTAAAAAGAGAA CACCTTGTTAAAAACACTGATGGTATTGAATTAGACCAAGTCGTTGGTTTAATGTTTTAT GGTACTGGAGAAATCGGAGATAATAAACAATCATTTGCATTTATCCTTGATACCGGTTCA TCCAACTTATGGGTTCCAAGCAAAGCATGCAAATCCGAAGGTTGTTCATATAAACACACT TATGATTCAGAAAAATCACATACATATGAAAAAGATGGTACACCAGTAAGTATAGTATAT GGATCTGGTGGAATCAAAGGTTTTTTTAGTAATGATATATTTACTCTTGGACATCACACA ATACCATACAAATTTATTGAAGTAACTCAAACTGATGACTTAGAACCAATTTATAGTGGA TCTCCATTTGATGGTATATTAGGATTAGGATGGAAAAGTTTAGCTGTCGGAAGTGTAGAA CCAGCTATTGTTGAAATGAAAAAAAAAGGACAAATCGAAAATGCATTATTCTCATTCTAC TTCCCAGCAGCAGAAGATGCAAATGGTTATTTCACTATTGGTGGTATTGAAGAAAGCTTT TACACTGGTGATATTACCTATGAAAAATTAACCAATGAATCATACTGGCAAATTCAATTA GATGTAGCTTTTGGTTCAGTAACCCTTGATAATGCTAGTATCATTGTTGATAGTGGTACA AGTGCTATCACTGCCCCATCAGATTTTCTTGACAAATTCTTTAACACTATCACAAGTATC CCAGTACCTTTCCTTCCACTCAGAGTTGTTTTATGTGACGACAAAACCTTACCAGTTTTA AAATTCACATCTAAAGGCGCAACATACACTATTGAACCACAACAATACTTATTTGATCTT GACCCAACCGGTGGTCTATGCCTTATTGGAATTACAGATGTAGATATTGATGCTAGCACT TTCATTCTTGGAGATGTATTCTTTAAAAAATACTACACTATCTTCGATTATGATAATGAA AGAGTTGGTTTCGCACTTGCAAAAAACTAA
  • Download Fasta

  • Fasta :-

    MEYSEKEPNYSNGLMRNGSAFGHLKFDNMKSFKIQKKFQALYFIIFVCIIGSIFAYLVGS NYYGSKTDIDKIIANSNYLTIRGKLERPRDKLIKKVMNKNISNYIKESFKLLKSGLLKRE HLVKNTDGIELDQVVGLMFYGTGEIGDNKQSFAFILDTGSSNLWVPSKACKSEGCSYKHT YDSEKSHTYEKDGTPVSIVYGSGGIKGFFSNDIFTLGHHTIPYKFIEVTQTDDLEPIYSG SPFDGILGLGWKSLAVGSVEPAIVEMKKKGQIENALFSFYFPAAEDANGYFTIGGIEESF YTGDITYEKLTNESYWQIQLDVAFGSVTLDNASIIVDSGTSAITAPSDFLDKFFNTITSI PVPFLPLRVVLCDDKTLPVLKFTSKGATYTIEPQQYLFDLDPTGGLCLIGITDVDIDAST FILGDVFFKKYYTIFDYDNERVGFALAKN

  • title: catalytic residue
  • coordinates: D157,D337
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_1035200183 SHTYDSEKSH0.995unsp

PCHAS_103520      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India