PCHAS_1041500 | lysophospholipase, putative

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1041500OTHER0.9994390.0005180.000043
No Results

  • Fasta :-

    >PCHAS_1041500 MIIEGIELDDNILRENRSQIAGKPKEGWLFNKNGLLLKTYRWIVNSPIGIVLLLHGFQGD TQVTFMTERVQLTYAKDRIIVFDKALTYKYSWIEKFNQDGYSVYGIDYQGHGGSQSSDEL RDNVNCFDDIVNDVIQYMNQIQDEISNENQTDDESHDIVTKEKRLPMYIIGHSMGGNIAL RILQLLGKEKEDRIKAKNSNKNKKSKNMLCNFNGINKTDNDVDDMNNANDYDSDNSGASA STMANGSSCANDKDERCYNYLGNLNIKGCVSLAGMIRINVPLDSGNKSFKYFYLPIINIA SRIAPHAGLMVKFRNYKPPKFSINVFRNNEGIYDYVVNLKCVYELIKATVTLDSDINYMP KDIPFLIVHSKDDSACSYEWASSFYNKAKVDKKEFYPLDNMDHVITTTPGYEDVLKKVAD WISDLRMNDKDEIKDEIKHEIKDEIKHEIKHEIKDEIKHEIKDEIKHKIRHKIRHEIEEK KENEI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1041500.fa Sequence name : PCHAS_1041500 Sequence length : 485 VALUES OF COMPUTED PARAMETERS Coef20 : 3.611 CoefTot : 0.000 ChDiff : -11 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.118 1.312 0.034 0.622 MesoH : -0.761 0.204 -0.409 0.171 MuHd_075 : 19.925 17.943 5.396 4.599 MuHd_095 : 19.381 10.590 4.507 3.750 MuHd_100 : 30.191 17.139 7.370 6.524 MuHd_105 : 36.662 21.282 9.490 8.416 Hmax_075 : -4.375 13.100 -1.007 3.160 Hmax_095 : -7.962 3.500 -3.657 2.013 Hmax_100 : -0.600 9.900 -0.595 4.100 Hmax_105 : -0.900 12.017 -0.595 4.223 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9126 0.0874 DFMC : 0.9241 0.0759
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 485 PCHAS_1041500 MIIEGIELDDNILRENRSQIAGKPKEGWLFNKNGLLLKTYRWIVNSPIGIVLLLHGFQGDTQVTFMTERVQLTYAKDRII 80 VFDKALTYKYSWIEKFNQDGYSVYGIDYQGHGGSQSSDELRDNVNCFDDIVNDVIQYMNQIQDEISNENQTDDESHDIVT 160 KEKRLPMYIIGHSMGGNIALRILQLLGKEKEDRIKAKNSNKNKKSKNMLCNFNGINKTDNDVDDMNNANDYDSDNSGASA 240 STMANGSSCANDKDERCYNYLGNLNIKGCVSLAGMIRINVPLDSGNKSFKYFYLPIINIASRIAPHAGLMVKFRNYKPPK 320 FSINVFRNNEGIYDYVVNLKCVYELIKATVTLDSDINYMPKDIPFLIVHSKDDSACSYEWASSFYNKAKVDKKEFYPLDN 400 MDHVITTTPGYEDVLKKVADWISDLRMNDKDEIKDEIKHEIKDEIKHEIKHEIKDEIKHEIKDEIKHKIRHKIRHEIEEK 480 KENEI 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1041500 14 LDDNILR|EN 0.078 . PCHAS_1041500 17 NILRENR|SQ 0.329 . PCHAS_1041500 23 RSQIAGK|PK 0.084 . PCHAS_1041500 25 QIAGKPK|EG 0.065 . PCHAS_1041500 32 EGWLFNK|NG 0.054 . PCHAS_1041500 38 KNGLLLK|TY 0.065 . PCHAS_1041500 41 LLLKTYR|WI 0.090 . PCHAS_1041500 69 VTFMTER|VQ 0.066 . PCHAS_1041500 76 VQLTYAK|DR 0.067 . PCHAS_1041500 78 LTYAKDR|II 0.080 . PCHAS_1041500 84 RIIVFDK|AL 0.071 . PCHAS_1041500 89 DKALTYK|YS 0.073 . PCHAS_1041500 95 KYSWIEK|FN 0.078 . PCHAS_1041500 121 QSSDELR|DN 0.137 . PCHAS_1041500 161 SHDIVTK|EK 0.057 . PCHAS_1041500 163 DIVTKEK|RL 0.062 . PCHAS_1041500 164 IVTKEKR|LP 0.154 . PCHAS_1041500 181 GGNIALR|IL 0.081 . PCHAS_1041500 188 ILQLLGK|EK 0.065 . PCHAS_1041500 190 QLLGKEK|ED 0.060 . PCHAS_1041500 193 GKEKEDR|IK 0.080 . PCHAS_1041500 195 EKEDRIK|AK 0.061 . PCHAS_1041500 197 EDRIKAK|NS 0.088 . PCHAS_1041500 201 KAKNSNK|NK 0.060 . PCHAS_1041500 203 KNSNKNK|KS 0.082 . PCHAS_1041500 204 NSNKNKK|SK 0.174 . PCHAS_1041500 206 NKNKKSK|NM 0.076 . PCHAS_1041500 217 NFNGINK|TD 0.066 . PCHAS_1041500 253 SSCANDK|DE 0.066 . PCHAS_1041500 256 ANDKDER|CY 0.075 . PCHAS_1041500 267 LGNLNIK|GC 0.063 . PCHAS_1041500 277 SLAGMIR|IN 0.083 . PCHAS_1041500 287 PLDSGNK|SF 0.055 . PCHAS_1041500 290 SGNKSFK|YF 0.071 . PCHAS_1041500 302 IINIASR|IA 0.116 . PCHAS_1041500 312 HAGLMVK|FR 0.064 . PCHAS_1041500 314 GLMVKFR|NY 0.123 . PCHAS_1041500 317 VKFRNYK|PP 0.103 . PCHAS_1041500 320 RNYKPPK|FS 0.082 . PCHAS_1041500 327 FSINVFR|NN 0.145 . PCHAS_1041500 340 DYVVNLK|CV 0.069 . PCHAS_1041500 347 CVYELIK|AT 0.060 . PCHAS_1041500 361 DINYMPK|DI 0.075 . PCHAS_1041500 371 FLIVHSK|DD 0.077 . PCHAS_1041500 387 ASSFYNK|AK 0.078 . PCHAS_1041500 389 SFYNKAK|VD 0.071 . PCHAS_1041500 392 NKAKVDK|KE 0.068 . PCHAS_1041500 393 KAKVDKK|EF 0.101 . PCHAS_1041500 416 GYEDVLK|KV 0.076 . PCHAS_1041500 417 YEDVLKK|VA 0.105 . PCHAS_1041500 426 DWISDLR|MN 0.077 . PCHAS_1041500 430 DLRMNDK|DE 0.070 . PCHAS_1041500 434 NDKDEIK|DE 0.068 . PCHAS_1041500 438 EIKDEIK|HE 0.060 . PCHAS_1041500 442 EIKHEIK|DE 0.069 . PCHAS_1041500 446 EIKDEIK|HE 0.061 . PCHAS_1041500 450 EIKHEIK|HE 0.061 . PCHAS_1041500 454 EIKHEIK|DE 0.068 . PCHAS_1041500 458 EIKDEIK|HE 0.060 . PCHAS_1041500 462 EIKHEIK|DE 0.064 . PCHAS_1041500 466 EIKDEIK|HK 0.060 . PCHAS_1041500 468 KDEIKHK|IR 0.081 . PCHAS_1041500 470 EIKHKIR|HK 0.105 . PCHAS_1041500 472 KHKIRHK|IR 0.070 . PCHAS_1041500 474 KIRHKIR|HE 0.105 . PCHAS_1041500 480 RHEIEEK|KE 0.060 . PCHAS_1041500 481 HEIEEKK|EN 0.106 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1041500 ATGATAATCGAAGGAATTGAATTGGATGATAATATATTAAGGGAGAATAGATCCCAAATA GCTGGTAAACCTAAGGAAGGTTGGTTATTTAATAAAAATGGTTTACTTTTAAAAACATAT AGATGGATAGTTAATAGTCCTATAGGAATTGTACTGTTATTACATGGATTCCAAGGTGAT ACTCAAGTAACTTTTATGACAGAAAGAGTACAACTTACGTACGCCAAAGACAGAATAATA GTATTTGATAAAGCCCTTACGTATAAATATAGTTGGATTGAAAAATTTAATCAAGATGGT TATTCAGTATACGGGATAGATTACCAAGGACATGGTGGATCACAATCATCGGATGAATTA AGAGACAATGTTAATTGCTTTGATGATATAGTTAATGATGTAATACAATATATGAATCAA ATTCAAGATGAAATCTCGAATGAAAATCAAACGGATGACGAATCTCATGATATAGTAACT AAAGAAAAAAGACTTCCTATGTATATTATTGGACATTCGATGGGTGGAAATATTGCTTTA AGAATCTTACAATTACTAGGGAAAGAAAAAGAAGATAGAATTAAGGCTAAAAATTCAAAT AAAAATAAAAAATCAAAAAACATGCTATGCAACTTTAATGGTATTAATAAAACTGATAAT GATGTGGATGATATGAATAATGCTAATGATTATGATTCCGATAATTCCGGTGCTAGTGCT TCTACTATGGCAAATGGTAGTTCTTGTGCTAATGATAAAGATGAAAGATGTTATAATTAT TTAGGTAATTTAAATATTAAAGGTTGCGTGTCTTTAGCTGGTATGATAAGAATAAACGTA CCATTGGATTCTGGAAACAAATCATTTAAGTATTTTTATTTACCTATAATAAACATCGCG TCTCGTATCGCACCACATGCAGGACTTATGGTAAAATTCCGCAATTATAAACCCCCCAAA TTTTCTATTAATGTATTTAGAAATAATGAAGGTATATATGATTATGTAGTAAATTTAAAA TGTGTATATGAACTTATAAAAGCAACAGTCACATTGGATTCTGATATTAATTATATGCCA AAAGATATTCCTTTCTTAATTGTGCATTCAAAAGATGACAGTGCGTGTTCTTATGAATGG GCATCTTCATTTTATAATAAAGCAAAGGTTGATAAAAAAGAATTCTATCCTCTTGATAAC ATGGATCATGTTATAACGACAACCCCAGGATATGAGGATGTTTTGAAAAAAGTTGCTGAT TGGATTTCTGATTTAAGAATGAATGATAAAGATGAAATAAAAGATGAAATAAAACATGAA ATAAAAGATGAAATAAAACATGAAATAAAACATGAAATAAAAGATGAAATAAAACATGAA ATAAAAGATGAAATAAAACATAAAATAAGACATAAAATAAGACATGAAATCGAAGAAAAA AAAGAAAATGAGATATAG
  • Download Fasta

  • Fasta :-

    MIIEGIELDDNILRENRSQIAGKPKEGWLFNKNGLLLKTYRWIVNSPIGIVLLLHGFQGD TQVTFMTERVQLTYAKDRIIVFDKALTYKYSWIEKFNQDGYSVYGIDYQGHGGSQSSDEL RDNVNCFDDIVNDVIQYMNQIQDEISNENQTDDESHDIVTKEKRLPMYIIGHSMGGNIAL RILQLLGKEKEDRIKAKNSNKNKKSKNMLCNFNGINKTDNDVDDMNNANDYDSDNSGASA STMANGSSCANDKDERCYNYLGNLNIKGCVSLAGMIRINVPLDSGNKSFKYFYLPIINIA SRIAPHAGLMVKFRNYKPPKFSINVFRNNEGIYDYVVNLKCVYELIKATVTLDSDINYMP KDIPFLIVHSKDDSACSYEWASSFYNKAKVDKKEFYPLDNMDHVITTTPGYEDVLKKVAD WISDLRMNDKDEIKDEIKHEIKDEIKHEIKHEIKDEIKHEIKDEIKHKIRHKIRHEIEEK KENEI

    No Results
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PCHAS_104150      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India