• Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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  • Curated_GO_Function_IDs:        

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_ID
Prediction
OTHER
SP
mTP
CS_Position
PCHAS_1125500 OTHER 0.999979 0.000003 0.000017
Showing 1 to 1 of 1 rows
No Results
  • Fasta :-

    >PCHAS_1125500 MNETSKEYDSLYDCIYDYEDNDELINIVNNDNLVNFNTQNKSVHPCINQNKDPSNDQTKI LTKNENHDEPNLFTDCISSNTLNDIDIYKDNQKVENIEKEKLGTRCKDEASTGKGSLLTS KTRINCNTHNSDTNKILENDNNNKSSELNKNITNSNEKNSTNNYVHINDDLNIIKNNHDE IENIYEKEINNDIKTIEETKDDNLNLLYQSSKELGSSPHELGFIILENTSEQIKKNERLL SKESKSGYDREKKNGNGYEQEQIDKNNINSNKQNEYNTTDNKNGSYQNNEKKETSSNNTP QQNDCNRSTFECNICFDDVRDPVVTRCGHLFCWFCLSAWIKKNNDCPVCKAEVTKENVIP LYGRGKNSSDHKYSTTEEPRPTPKRKENVRRNNDYSNNLGLRASFGVWANPFSFGMSYTN MSDQSHFYDNRNDNLRPQMDAFHVEAASSCFFFLGFFLSLYILFYSS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1125500.fa Sequence name : PCHAS_1125500 Sequence length : 467 VALUES OF COMPUTED PARAMETERS Coef20 : 2.701 CoefTot : -0.134 ChDiff : -19 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.388 2.053 0.426 0.819 MesoH : -0.476 -0.021 -0.441 0.170 MuHd_075 : 34.596 19.932 9.940 3.526 MuHd_095 : 34.093 17.873 8.862 6.471 MuHd_100 : 44.104 22.410 11.427 7.684 MuHd_105 : 43.989 22.385 11.570 7.365 Hmax_075 : 1.983 5.483 0.434 1.493 Hmax_095 : 8.400 5.600 0.489 3.870 Hmax_100 : 9.700 6.100 0.756 3.870 Hmax_105 : 2.538 5.163 0.209 2.765 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9605 0.0395 DFMC : 0.9276 0.0724
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 467 PCHAS_1125500 MNETSKEYDSLYDCIYDYEDNDELINIVNNDNLVNFNTQNKSVHPCINQNKDPSNDQTKILTKNENHDEPNLFTDCISSN 80 TLNDIDIYKDNQKVENIEKEKLGTRCKDEASTGKGSLLTSKTRINCNTHNSDTNKILENDNNNKSSELNKNITNSNEKNS 160 TNNYVHINDDLNIIKNNHDEIENIYEKEINNDIKTIEETKDDNLNLLYQSSKELGSSPHELGFIILENTSEQIKKNERLL 240 SKESKSGYDREKKNGNGYEQEQIDKNNINSNKQNEYNTTDNKNGSYQNNEKKETSSNNTPQQNDCNRSTFECNICFDDVR 320 DPVVTRCGHLFCWFCLSAWIKKNNDCPVCKAEVTKENVIPLYGRGKNSSDHKYSTTEEPRPTPKRKENVRRNNDYSNNLG 400 LRASFGVWANPFSFGMSYTNMSDQSHFYDNRNDNLRPQMDAFHVEAASSCFFFLGFFLSLYILFYSS 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1125500 6 -MNETSK|EY 0.065 . PCHAS_1125500 41 NFNTQNK|SV 0.142 . PCHAS_1125500 51 PCINQNK|DP 0.072 . PCHAS_1125500 59 PSNDQTK|IL 0.085 . PCHAS_1125500 63 QTKILTK|NE 0.063 . PCHAS_1125500 89 NDIDIYK|DN 0.083 . PCHAS_1125500 93 IYKDNQK|VE 0.055 . PCHAS_1125500 99 KVENIEK|EK 0.052 . PCHAS_1125500 101 ENIEKEK|LG 0.061 . PCHAS_1125500 105 KEKLGTR|CK 0.082 . PCHAS_1125500 107 KLGTRCK|DE 0.068 . PCHAS_1125500 114 DEASTGK|GS 0.058 . PCHAS_1125500 121 GSLLTSK|TR 0.057 . PCHAS_1125500 123 LLTSKTR|IN 0.081 . PCHAS_1125500 135 HNSDTNK|IL 0.080 . PCHAS_1125500 144 ENDNNNK|SS 0.073 . PCHAS_1125500 150 KSSELNK|NI 0.072 . PCHAS_1125500 158 ITNSNEK|NS 0.060 . PCHAS_1125500 175 DDLNIIK|NN 0.064 . PCHAS_1125500 187 IENIYEK|EI 0.066 . PCHAS_1125500 194 EINNDIK|TI 0.076 . PCHAS_1125500 200 KTIEETK|DD 0.062 . PCHAS_1125500 212 LLYQSSK|EL 0.076 . PCHAS_1125500 234 NTSEQIK|KN 0.068 . PCHAS_1125500 235 TSEQIKK|NE 0.079 . PCHAS_1125500 238 QIKKNER|LL 0.087 . PCHAS_1125500 242 NERLLSK|ES 0.064 . PCHAS_1125500 245 LLSKESK|SG 0.102 . PCHAS_1125500 250 SKSGYDR|EK 0.105 . PCHAS_1125500 252 SGYDREK|KN 0.082 . PCHAS_1125500 253 GYDREKK|NG 0.243 . PCHAS_1125500 265 EQEQIDK|NN 0.059 . PCHAS_1125500 272 NNINSNK|QN 0.071 . PCHAS_1125500 282 YNTTDNK|NG 0.057 . PCHAS_1125500 291 SYQNNEK|KE 0.062 . PCHAS_1125500 292 YQNNEKK|ET 0.119 . PCHAS_1125500 307 QQNDCNR|ST 0.155 . PCHAS_1125500 320 ICFDDVR|DP 0.081 . PCHAS_1125500 326 RDPVVTR|CG 0.073 . PCHAS_1125500 341 CLSAWIK|KN 0.073 . PCHAS_1125500 342 LSAWIKK|NN 0.092 . PCHAS_1125500 350 NDCPVCK|AE 0.069 . PCHAS_1125500 355 CKAEVTK|EN 0.067 . PCHAS_1125500 364 VIPLYGR|GK 0.078 . PCHAS_1125500 366 PLYGRGK|NS 0.068 . PCHAS_1125500 372 KNSSDHK|YS 0.098 . PCHAS_1125500 380 STTEEPR|PT 0.078 . PCHAS_1125500 384 EPRPTPK|RK 0.072 . PCHAS_1125500 385 PRPTPKR|KE 0.138 . PCHAS_1125500 386 RPTPKRK|EN 0.091 . PCHAS_1125500 390 KRKENVR|RN 0.091 . PCHAS_1125500 391 RKENVRR|NN 0.194 . PCHAS_1125500 402 SNNLGLR|AS 0.099 . PCHAS_1125500 431 SHFYDNR|ND 0.075 . PCHAS_1125500 436 NRNDNLR|PQ 0.130 . ____________________________^_________________
  • Fasta :-

    >PCHAS_1125500 ATGAATGAAACTAGCAAAGAATATGATTCTCTCTATGATTGCATATATGATTACGAAGAT AATGATGAATTAATAAATATCGTTAACAATGATAACTTAGTAAATTTTAATACCCAAAAT AAATCAGTGCATCCATGCATAAATCAAAATAAAGACCCAAGCAATGACCAAACAAAAATA CTCACAAAAAATGAAAACCATGACGAACCGAATTTATTTACAGATTGTATATCATCAAAC ACTTTAAACGACATTGATATATATAAAGATAATCAAAAAGTTGAAAATATTGAAAAAGAA AAATTGGGGACTCGTTGCAAAGATGAAGCATCAACAGGCAAAGGCTCTTTACTAACCTCA AAAACTAGGATAAATTGTAATACTCATAATAGTGATACTAATAAAATTTTAGAAAACGAT AACAATAATAAATCGAGCGAATTAAATAAGAATATTACTAATTCAAATGAAAAAAATTCA ACGAATAATTATGTGCATATAAATGATGACTTAAATATTATAAAAAATAATCATGATGAA ATCGAAAATATATATGAAAAAGAAATTAATAACGATATAAAAACCATTGAAGAAACCAAA GATGATAACCTAAATCTTTTATATCAAAGCTCAAAGGAACTTGGATCGTCACCCCATGAA CTTGGTTTTATAATTTTAGAGAATACATCTGAACAAATAAAAAAAAACGAAAGATTATTA AGTAAAGAATCTAAAAGTGGGTACGATCGAGAGAAAAAAAATGGAAATGGATATGAGCAA GAGCAAATTGATAAAAATAACATAAATAGTAATAAACAAAATGAATATAATACAACCGAT AATAAAAATGGTTCATATCAAAATAATGAGAAAAAAGAAACTTCAAGTAATAATACCCCA CAACAAAATGATTGCAATAGAAGTACATTTGAATGCAATATATGCTTTGATGATGTAAGA GATCCTGTTGTTACTAGATGTGGTCATTTGTTTTGTTGGTTTTGTCTTTCTGCATGGATT AAAAAAAATAATGATTGCCCTGTATGCAAAGCAGAAGTAACCAAAGAAAATGTAATACCT TTGTATGGTAGAGGAAAAAATAGTAGTGATCATAAATATTCAACTACTGAAGAACCCAGA CCTACACCTAAAAGAAAAGAAAATGTTCGAAGAAATAACGACTATTCTAATAATTTAGGA TTAAGAGCTTCCTTTGGTGTATGGGCCAATCCGTTTTCTTTTGGCATGTCCTATACAAAC ATGTCTGACCAATCACATTTTTATGACAATAGAAATGATAATTTAAGGCCACAAATGGAT GCATTTCATGTTGAAGCTGCTTCTTCGTGTTTCTTTTTCTTAGGATTTTTTTTGTCTTTG TACATTTTGTTTTATTCGTCTTAG
  • Download Fasta
  • Fasta :-

    MNETSKEYDSLYDCIYDYEDNDELINIVNNDNLVNFNTQNKSVHPCINQNKDPSNDQTKI LTKNENHDEPNLFTDCISSNTLNDIDIYKDNQKVENIEKEKLGTRCKDEASTGKGSLLTS KTRINCNTHNSDTNKILENDNNNKSSELNKNITNSNEKNSTNNYVHINDDLNIIKNNHDE IENIYEKEINNDIKTIEETKDDNLNLLYQSSKELGSSPHELGFIILENTSEQIKKNERLL SKESKSGYDREKKNGNGYEQEQIDKNNINSNKQNEYNTTDNKNGSYQNNEKKETSSNNTP QQNDCNRSTFECNICFDDVRDPVVTRCGHLFCWFCLSAWIKKNNDCPVCKAEVTKENVIP LYGRGKNSSDHKYSTTEEPRPTPKRKENVRRNNDYSNNLGLRASFGVWANPFSFGMSYTN MSDQSHFYDNRNDNLRPQMDAFHVEAASSCFFFLGFFLSLYILFYSS

  • title: Zn binding site
  • coordinates: C312,C315,C327,H329,C332,C335,C346,C349
No Results
No Results
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ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
PCHAS_1125500 246 S KESKSGYDR 0.997 unsp PCHAS_1125500 246 S KESKSGYDR 0.997 unsp PCHAS_1125500 246 S KESKSGYDR 0.997 unsp PCHAS_1125500 374 S DHKYSTTEE 0.994 unsp PCHAS_1125500 382 T EPRPTPKRK 0.994 unsp PCHAS_1125500 10 S KEYDSLYDC 0.993 unsp PCHAS_1125500 217 S ELGSSPHEL 0.994 unsp
Showing 1 to 1 of 1 rows

PCHAS_112550      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India