PCHAS_1125700 | protein DJ-1, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1125700OTHER0.9986770.0012580.000065
No Results

  • Fasta :-

    >PCHAS_1125700 MSMKKTALVVVASGSEDVEYITTVDILRRANIEVTTASIHDTEKVQLQSKNIVFADTIID KVKNNIFDVIIIPGGMKGSNAISDCPVAIEMLREQKKNNRLYAAICAAPATVLHRHSLID DVEAVAYPSFESDFKHIGKGRVCVSKNCVTSLGPGTAGEFAFKIVELLLGRDAALRLASG FLLHPSITF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1125700.fa Sequence name : PCHAS_1125700 Sequence length : 189 VALUES OF COMPUTED PARAMETERS Coef20 : 3.890 CoefTot : 0.264 ChDiff : 0 ZoneTo : 15 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.847 1.218 0.077 0.515 MesoH : -0.634 0.406 -0.336 0.204 MuHd_075 : 1.972 4.036 0.867 1.298 MuHd_095 : 24.066 13.258 7.263 4.281 MuHd_100 : 14.643 11.659 4.598 3.444 MuHd_105 : 4.157 8.237 1.071 2.009 Hmax_075 : 4.200 9.200 -0.408 3.000 Hmax_095 : 14.400 15.100 2.607 4.860 Hmax_100 : 5.000 12.400 0.423 4.140 Hmax_105 : 5.200 11.600 -0.368 3.540 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9495 0.0505 DFMC : 0.9518 0.0482
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 189 PCHAS_1125700 MSMKKTALVVVASGSEDVEYITTVDILRRANIEVTTASIHDTEKVQLQSKNIVFADTIIDKVKNNIFDVIIIPGGMKGSN 80 AISDCPVAIEMLREQKKNNRLYAAICAAPATVLHRHSLIDDVEAVAYPSFESDFKHIGKGRVCVSKNCVTSLGPGTAGEF 160 AFKIVELLLGRDAALRLASGFLLHPSITF 240 ................................................................................ 80 ................................................................................ 160 ............................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1125700 4 ---MSMK|KT 0.065 . PCHAS_1125700 5 --MSMKK|TA 0.101 . PCHAS_1125700 28 TTVDILR|RA 0.090 . PCHAS_1125700 29 TVDILRR|AN 0.143 . PCHAS_1125700 44 SIHDTEK|VQ 0.061 . PCHAS_1125700 50 KVQLQSK|NI 0.060 . PCHAS_1125700 61 ADTIIDK|VK 0.059 . PCHAS_1125700 63 TIIDKVK|NN 0.065 . PCHAS_1125700 77 IIPGGMK|GS 0.061 . PCHAS_1125700 93 VAIEMLR|EQ 0.069 . PCHAS_1125700 96 EMLREQK|KN 0.088 . PCHAS_1125700 97 MLREQKK|NN 0.091 . PCHAS_1125700 100 EQKKNNR|LY 0.082 . PCHAS_1125700 115 PATVLHR|HS 0.072 . PCHAS_1125700 135 SFESDFK|HI 0.085 . PCHAS_1125700 139 DFKHIGK|GR 0.059 . PCHAS_1125700 141 KHIGKGR|VC 0.081 . PCHAS_1125700 146 GRVCVSK|NC 0.072 . PCHAS_1125700 163 AGEFAFK|IV 0.070 . PCHAS_1125700 171 VELLLGR|DA 0.079 . PCHAS_1125700 176 GRDAALR|LA 0.110 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1125700 ATGAGTATGAAAAAAACAGCATTAGTTGTAGTGGCTTCAGGCTCTGAAGACGTTGAATAT ATAACAACAGTTGACATATTAAGAAGAGCTAATATCGAAGTAACAACAGCTTCAATACAC GACACAGAAAAGGTTCAGCTCCAATCAAAAAATATCGTTTTTGCTGATACGATTATAGAT AAAGTGAAAAATAATATATTCGATGTAATAATAATACCCGGAGGAATGAAAGGATCTAAT GCTATATCAGATTGCCCAGTTGCAATTGAAATGTTAAGAGAACAAAAAAAAAATAATAGG CTTTATGCAGCTATATGTGCTGCACCTGCAACTGTTCTACATCGACATTCCTTGATTGAT GATGTTGAAGCAGTTGCATACCCTTCTTTTGAAAGTGATTTTAAACACATTGGTAAAGGA AGAGTCTGCGTTTCAAAAAATTGTGTAACATCTCTTGGACCAGGAACAGCTGGCGAATTT GCATTTAAAATTGTAGAATTACTACTAGGTAGAGATGCTGCCCTAAGACTTGCTAGCGGT TTTCTTTTACACCCATCTATTACTTTTTAA
  • Download Fasta

  • Fasta :-

    MSMKKTALVVVASGSEDVEYITTVDILRRANIEVTTASIHDTEKVQLQSKNIVFADTIID KVKNNIFDVIIIPGGMKGSNAISDCPVAIEMLREQKKNNRLYAAICAAPATVLHRHSLID DVEAVAYPSFESDFKHIGKGRVCVSKNCVTSLGPGTAGEFAFKIVELLLGRDAALRLASG FLLHPSITF

  • title: conserved cys residue
  • coordinates: C106
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_112570038 SVTTASIHDT0.993unspPCHAS_1125700117 SLHRHSLIDD0.997unsp

PCHAS_112570      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India