PCHAS_1126600 | protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1126600OTHER0.9999970.0000010.000002
No Results

  • Fasta :-

    >PCHAS_1126600 MFYKELIDCNCEKNQKNVERNSFGIYIRLLYCFFSVASLIGFSCMANGNKGIFYLLFSFC PSFVYLYLFKKKIKKRIKFSHIVEMILYGAILSIAFAGFLEYTFSLLCLYFCHTCFLKNV KEPYSFACSIIMLLYFFFGVAYVEEFSKICPIFFINTNSIVNGSEYTELPIIENHNFKND IAYEDNENNNKFNKFKYIYADDKFEYIFFSLCSSAGFSSTENLVYFTLTSEQNVLTIIIL RNIICVLLHMSCSGIASYNIINNRSMMQSILSILRSLFLSSLFHAIYDYSIYYSSLNIPE YQISFFKALFMYSFLSMIFIFFVIIKGIV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1126600.fa Sequence name : PCHAS_1126600 Sequence length : 329 VALUES OF COMPUTED PARAMETERS Coef20 : 3.353 CoefTot : -0.270 ChDiff : 3 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.729 2.629 0.487 0.946 MesoH : 0.869 1.271 0.053 0.533 MuHd_075 : 20.118 11.844 4.828 4.063 MuHd_095 : 31.049 15.977 8.544 5.841 MuHd_100 : 19.003 8.279 4.928 3.186 MuHd_105 : 5.914 1.828 0.745 0.411 Hmax_075 : -5.950 4.025 -3.030 1.409 Hmax_095 : 3.413 8.313 0.163 3.316 Hmax_100 : -6.600 2.200 -2.852 1.520 Hmax_105 : -7.300 2.200 -3.338 0.370 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9573 0.0427 DFMC : 0.9602 0.0398
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 329 PCHAS_1126600 MFYKELIDCNCEKNQKNVERNSFGIYIRLLYCFFSVASLIGFSCMANGNKGIFYLLFSFCPSFVYLYLFKKKIKKRIKFS 80 HIVEMILYGAILSIAFAGFLEYTFSLLCLYFCHTCFLKNVKEPYSFACSIIMLLYFFFGVAYVEEFSKICPIFFINTNSI 160 VNGSEYTELPIIENHNFKNDIAYEDNENNNKFNKFKYIYADDKFEYIFFSLCSSAGFSSTENLVYFTLTSEQNVLTIIIL 240 RNIICVLLHMSCSGIASYNIINNRSMMQSILSILRSLFLSSLFHAIYDYSIYYSSLNIPEYQISFFKALFMYSFLSMIFI 320 FFVIIKGIV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1126600 4 ---MFYK|EL 0.070 . PCHAS_1126600 13 IDCNCEK|NQ 0.069 . PCHAS_1126600 16 NCEKNQK|NV 0.068 . PCHAS_1126600 20 NQKNVER|NS 0.106 . PCHAS_1126600 28 SFGIYIR|LL 0.081 . PCHAS_1126600 50 CMANGNK|GI 0.073 . PCHAS_1126600 70 VYLYLFK|KK 0.056 . PCHAS_1126600 71 YLYLFKK|KI 0.091 . PCHAS_1126600 72 LYLFKKK|IK 0.100 . PCHAS_1126600 74 LFKKKIK|KR 0.061 . PCHAS_1126600 75 FKKKIKK|RI 0.089 . PCHAS_1126600 76 KKKIKKR|IK 0.230 . PCHAS_1126600 78 KIKKRIK|FS 0.092 . PCHAS_1126600 118 CHTCFLK|NV 0.060 . PCHAS_1126600 121 CFLKNVK|EP 0.053 . PCHAS_1126600 148 YVEEFSK|IC 0.055 . PCHAS_1126600 178 IENHNFK|ND 0.078 . PCHAS_1126600 191 DNENNNK|FN 0.058 . PCHAS_1126600 194 NNNKFNK|FK 0.079 . PCHAS_1126600 196 NKFNKFK|YI 0.090 . PCHAS_1126600 203 YIYADDK|FE 0.059 . PCHAS_1126600 241 LTIIILR|NI 0.092 . PCHAS_1126600 264 YNIINNR|SM 0.156 . PCHAS_1126600 275 SILSILR|SL 0.081 . PCHAS_1126600 307 YQISFFK|AL 0.063 . PCHAS_1126600 326 IFFVIIK|GI 0.066 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1126600 ATGTTTTATAAAGAATTGATCGATTGTAACTGTGAGAAAAATCAAAAAAATGTAGAAAGA AATTCTTTTGGAATATATATTCGATTATTGTATTGTTTTTTTTCTGTGGCATCACTGATT GGTTTTTCTTGTATGGCAAACGGGAACAAAGGAATATTTTATTTGCTTTTTTCTTTTTGC CCTAGTTTCGTTTATCTTTATCTATTCAAGAAGAAAATAAAGAAACGAATAAAATTTTCA CATATTGTTGAAATGATATTATATGGAGCTATATTATCGATTGCTTTTGCAGGATTTTTA GAATATACTTTCTCACTTTTATGTCTTTATTTTTGTCATACATGTTTTTTAAAAAATGTT AAAGAACCATATTCCTTTGCCTGTTCAATAATTATGCTATTATACTTTTTTTTTGGGGTA GCATATGTAGAAGAATTTTCAAAAATTTGCCCAATATTTTTTATCAATACTAATTCAATA GTAAATGGAAGTGAATACACAGAACTGCCTATTATTGAGAATCATAATTTTAAGAATGAT ATAGCATATGAAGACAATGAAAATAATAATAAATTTAATAAGTTTAAATATATTTATGCA GATGATAAATTCGAATATATATTTTTTTCGTTGTGCTCTTCAGCAGGATTTTCGAGCACA GAAAATTTAGTTTATTTTACATTAACATCAGAACAAAATGTTTTGACAATTATAATACTA AGGAATATAATTTGTGTCCTATTGCACATGTCATGTTCAGGAATAGCATCCTACAACATC ATAAACAATCGAAGCATGATGCAAAGCATATTATCGATATTGAGGTCATTGTTTTTATCA TCATTATTTCATGCCATATATGACTATTCCATATATTACAGTTCATTAAATATCCCTGAA TATCAAATTTCATTTTTTAAAGCGTTGTTTATGTATTCCTTTTTGTCAATGATATTTATA TTTTTCGTTATAATTAAAGGAATTGTTTGA
  • Download Fasta

  • Fasta :-

    MFYKELIDCNCEKNQKNVERNSFGIYIRLLYCFFSVASLIGFSCMANGNKGIFYLLFSFC PSFVYLYLFKKKIKKRIKFSHIVEMILYGAILSIAFAGFLEYTFSLLCLYFCHTCFLKNV KEPYSFACSIIMLLYFFFGVAYVEEFSKICPIFFINTNSIVNGSEYTELPIIENHNFKND IAYEDNENNNKFNKFKYIYADDKFEYIFFSLCSSAGFSSTENLVYFTLTSEQNVLTIIIL RNIICVLLHMSCSGIASYNIINNRSMMQSILSILRSLFLSSLFHAIYDYSIYYSSLNIPE YQISFFKALFMYSFLSMIFIFFVIIKGIV

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PCHAS_112660      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India