PCHAS_1146100 | lysophospholipase, putative

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1146100OTHER0.9996290.0003370.000034
No Results

  • Fasta :-

    >PCHAS_1146100 MVIEGVELNNNELRNTKCSLDGDPKIGWLRNKNGLLLKTYAWIVQNPIGNVLLIHGFKVH TRLIFMKKNLKIPNNNEGLVVDNNNQYIYKDSWIEKFNQSGYSVYALDLQGHGESQSFGK FKGEFSSFDDLVDDVIQYMNQIYDETSSDNQKNDESHNIATTKKKRLPMYIVGYSMGGYI ALRILQELKKEKEDRIKAWNSNNYKNSNTRLSNSTNINDIDNGMHDMNISNVHGSDNSCA SISATKNAIASDKDEGFYNCLDKFNIKGCVSISGMIRIKSIFNPGNISLKYFYLPLMDFL AYVLPHVQMSSESRNKKSGYFANICKYYIFRNINGKKYKNVADFARATITLDCNANYIPK EIPLLFVHSKDDSLCSYEWTVSFHNKINVDKKELHAVDGMNHDTTTKPGNEEILKKIIDW ICNLKTNDEDK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1146100.fa Sequence name : PCHAS_1146100 Sequence length : 431 VALUES OF COMPUTED PARAMETERS Coef20 : 3.745 CoefTot : 0.000 ChDiff : 3 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.888 1.206 0.110 0.587 MesoH : -0.590 0.260 -0.372 0.195 MuHd_075 : 7.562 12.362 2.278 3.331 MuHd_095 : 17.199 10.441 3.216 2.903 MuHd_100 : 25.651 12.838 4.935 4.771 MuHd_105 : 30.152 15.117 7.301 5.896 Hmax_075 : -8.633 6.912 -2.744 1.759 Hmax_095 : -0.000 6.388 -2.368 1.829 Hmax_100 : -2.000 5.800 -2.288 2.210 Hmax_105 : 8.750 14.583 1.126 4.515 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8735 0.1265 DFMC : 0.9503 0.0497
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 431 PCHAS_1146100 MVIEGVELNNNELRNTKCSLDGDPKIGWLRNKNGLLLKTYAWIVQNPIGNVLLIHGFKVHTRLIFMKKNLKIPNNNEGLV 80 VDNNNQYIYKDSWIEKFNQSGYSVYALDLQGHGESQSFGKFKGEFSSFDDLVDDVIQYMNQIYDETSSDNQKNDESHNIA 160 TTKKKRLPMYIVGYSMGGYIALRILQELKKEKEDRIKAWNSNNYKNSNTRLSNSTNINDIDNGMHDMNISNVHGSDNSCA 240 SISATKNAIASDKDEGFYNCLDKFNIKGCVSISGMIRIKSIFNPGNISLKYFYLPLMDFLAYVLPHVQMSSESRNKKSGY 320 FANICKYYIFRNINGKKYKNVADFARATITLDCNANYIPKEIPLLFVHSKDDSLCSYEWTVSFHNKINVDKKELHAVDGM 400 NHDTTTKPGNEEILKKIIDWICNLKTNDEDK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1146100 14 LNNNELR|NT 0.110 . PCHAS_1146100 17 NELRNTK|CS 0.107 . PCHAS_1146100 25 SLDGDPK|IG 0.054 . PCHAS_1146100 30 PKIGWLR|NK 0.075 . PCHAS_1146100 32 IGWLRNK|NG 0.055 . PCHAS_1146100 38 KNGLLLK|TY 0.062 . PCHAS_1146100 58 LLIHGFK|VH 0.059 . PCHAS_1146100 62 GFKVHTR|LI 0.101 . PCHAS_1146100 67 TRLIFMK|KN 0.077 . PCHAS_1146100 68 RLIFMKK|NL 0.097 . PCHAS_1146100 71 FMKKNLK|IP 0.056 . PCHAS_1146100 90 NNQYIYK|DS 0.080 . PCHAS_1146100 96 KDSWIEK|FN 0.079 . PCHAS_1146100 120 ESQSFGK|FK 0.076 . PCHAS_1146100 122 QSFGKFK|GE 0.086 . PCHAS_1146100 152 TSSDNQK|ND 0.070 . PCHAS_1146100 163 HNIATTK|KK 0.062 . PCHAS_1146100 164 NIATTKK|KR 0.079 . PCHAS_1146100 165 IATTKKK|RL 0.104 . PCHAS_1146100 166 ATTKKKR|LP 0.151 . PCHAS_1146100 183 GGYIALR|IL 0.075 . PCHAS_1146100 189 RILQELK|KE 0.051 . PCHAS_1146100 190 ILQELKK|EK 0.103 . PCHAS_1146100 192 QELKKEK|ED 0.062 . PCHAS_1146100 195 KKEKEDR|IK 0.089 . PCHAS_1146100 197 EKEDRIK|AW 0.062 . PCHAS_1146100 205 WNSNNYK|NS 0.071 . PCHAS_1146100 210 YKNSNTR|LS 0.075 . PCHAS_1146100 246 ASISATK|NA 0.068 . PCHAS_1146100 253 NAIASDK|DE 0.073 . PCHAS_1146100 263 FYNCLDK|FN 0.077 . PCHAS_1146100 267 LDKFNIK|GC 0.063 . PCHAS_1146100 277 SISGMIR|IK 0.106 . PCHAS_1146100 279 SGMIRIK|SI 0.089 . PCHAS_1146100 290 PGNISLK|YF 0.068 . PCHAS_1146100 314 QMSSESR|NK 0.099 . PCHAS_1146100 316 SSESRNK|KS 0.063 . PCHAS_1146100 317 SESRNKK|SG 0.488 . PCHAS_1146100 326 YFANICK|YY 0.060 . PCHAS_1146100 331 CKYYIFR|NI 0.087 . PCHAS_1146100 336 FRNINGK|KY 0.069 . PCHAS_1146100 337 RNINGKK|YK 0.109 . PCHAS_1146100 339 INGKKYK|NV 0.099 . PCHAS_1146100 346 NVADFAR|AT 0.121 . PCHAS_1146100 360 NANYIPK|EI 0.064 . PCHAS_1146100 370 LLFVHSK|DD 0.072 . PCHAS_1146100 386 TVSFHNK|IN 0.085 . PCHAS_1146100 391 NKINVDK|KE 0.069 . PCHAS_1146100 392 KINVDKK|EL 0.166 . PCHAS_1146100 407 NHDTTTK|PG 0.057 . PCHAS_1146100 415 GNEEILK|KI 0.065 . PCHAS_1146100 416 NEEILKK|II 0.119 . PCHAS_1146100 425 DWICNLK|TN 0.057 . PCHAS_1146100 431 KTNDEDK|-- 0.072 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1146100 ATGGTGATAGAAGGAGTTGAATTGAATAATAATGAATTAAGAAATACAAAATGCAGTTTA GATGGTGATCCTAAGATAGGTTGGTTACGTAATAAAAATGGTTTACTTTTAAAAACATAC GCGTGGATAGTTCAAAACCCTATAGGAAATGTATTGTTAATACATGGATTCAAAGTTCAT ACTCGATTAATTTTTATGAAAAAAAATTTAAAAATTCCAAATAACAATGAAGGCTTAGTA GTAGACAATAATAATCAATATATTTATAAAGATAGTTGGATTGAAAAATTTAATCAAAGT GGTTATTCAGTATACGCACTAGATTTGCAAGGACATGGCGAATCACAATCGTTTGGAAAA TTTAAAGGTGAGTTTAGTTCTTTTGATGATTTAGTTGATGATGTAATACAATATATGAAT CAAATTTACGATGAAACCTCAAGTGATAATCAAAAGAATGATGAATCTCATAATATAGCG ACAACTAAAAAAAAAAGACTTCCTATGTATATTGTTGGATATTCGATGGGAGGATATATT GCTTTAAGAATATTACAAGAGTTAAAGAAAGAAAAAGAAGATAGAATTAAGGCGTGGAAT TCAAATAACTATAAAAATAGTAACACCAGGCTAAGCAATTCTACTAATATTAATGATATT GACAATGGTATGCATGATATGAATATTTCTAATGTTCATGGTTCCGATAATTCCTGTGCT AGTATCTCTGCTACGAAAAATGCTATTGCTAGTGATAAAGATGAAGGATTCTATAATTGT TTAGATAAGTTCAATATTAAAGGTTGCGTATCTATATCTGGCATGATAAGAATAAAATCA ATATTTAATCCTGGAAATATATCGCTAAAGTATTTTTATTTACCTTTAATGGACTTTCTG GCTTATGTCTTACCTCATGTACAAATGTCGTCAGAATCACGTAATAAAAAGTCCGGATAT TTTGCTAATATATGTAAATATTATATATTTCGAAATATTAATGGAAAAAAATATAAAAAT GTAGCTGATTTTGCAAGAGCAACGATAACATTGGATTGTAATGCTAATTATATTCCAAAA GAAATTCCTTTATTATTTGTGCATTCAAAAGATGATAGTCTTTGTTCTTATGAATGGACA GTTTCGTTTCATAATAAAATAAATGTTGATAAAAAAGAATTACATGCTGTTGATGGTATG AATCATGATACAACGACAAAGCCAGGAAATGAAGAAATTTTAAAAAAAATTATTGATTGG ATTTGTAATTTAAAAACAAATGATGAAGACAAATAA
  • Download Fasta

  • Fasta :-

    MVIEGVELNNNELRNTKCSLDGDPKIGWLRNKNGLLLKTYAWIVQNPIGNVLLIHGFKVH TRLIFMKKNLKIPNNNEGLVVDNNNQYIYKDSWIEKFNQSGYSVYALDLQGHGESQSFGK FKGEFSSFDDLVDDVIQYMNQIYDETSSDNQKNDESHNIATTKKKRLPMYIVGYSMGGYI ALRILQELKKEKEDRIKAWNSNNYKNSNTRLSNSTNINDIDNGMHDMNISNVHGSDNSCA SISATKNAIASDKDEGFYNCLDKFNIKGCVSISGMIRIKSIFNPGNISLKYFYLPLMDFL AYVLPHVQMSSESRNKKSGYFANICKYYIFRNINGKKYKNVADFARATITLDCNANYIPK EIPLLFVHSKDDSLCSYEWTVSFHNKINVDKKELHAVDGMNHDTTTKPGNEEILKKIIDW ICNLKTNDEDK

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_1146100251 SNAIASDKDE0.996unsp

PCHAS_114610      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India