PCHAS_1205800 | PPPDE peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1205800OTHER0.9998990.0000200.000082
No Results

  • Fasta :-

    >PCHAS_1205800 MQSKENLGSRESISSDNNGSGPSETKQSPTRHKYEANSSMVYLNIYDLDPVSKVVNSVVK SIGTGAFHAGVEVYGFEYSFGYIPGGQTGVMKTLPRHHPYHVYRESIPMGQTPLTRSEVD LLVDVMRLQWIGNTYDILSRQDIMKKYIKKSFQYHKNCLNFADYFCNLLDVGSIPEWVMS LQKNLNWMKSNISMASSKLKELNKASGLPNVLNYVKKKYNKSDESPKKCKVVLK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1205800.fa Sequence name : PCHAS_1205800 Sequence length : 234 VALUES OF COMPUTED PARAMETERS Coef20 : 3.469 CoefTot : -0.156 ChDiff : 10 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.553 0.971 -0.037 0.469 MesoH : -0.437 0.051 -0.400 0.219 MuHd_075 : 20.949 8.674 5.171 3.988 MuHd_095 : 8.855 5.830 2.904 2.765 MuHd_100 : 7.066 2.140 1.326 2.030 MuHd_105 : 4.383 3.548 1.376 0.910 Hmax_075 : -0.800 -0.700 -2.286 1.060 Hmax_095 : -11.400 -5.338 -4.991 -0.227 Hmax_100 : -11.200 -4.800 -4.806 -0.810 Hmax_105 : -6.100 -1.517 -3.944 -0.980 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9341 0.0659 DFMC : 0.9303 0.0697
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 234 PCHAS_1205800 MQSKENLGSRESISSDNNGSGPSETKQSPTRHKYEANSSMVYLNIYDLDPVSKVVNSVVKSIGTGAFHAGVEVYGFEYSF 80 GYIPGGQTGVMKTLPRHHPYHVYRESIPMGQTPLTRSEVDLLVDVMRLQWIGNTYDILSRQDIMKKYIKKSFQYHKNCLN 160 FADYFCNLLDVGSIPEWVMSLQKNLNWMKSNISMASSKLKELNKASGLPNVLNYVKKKYNKSDESPKKCKVVLK 240 ................................................................................ 80 ................................................................................ 160 .......................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1205800 4 ---MQSK|EN 0.064 . PCHAS_1205800 10 KENLGSR|ES 0.083 . PCHAS_1205800 26 SGPSETK|QS 0.058 . PCHAS_1205800 31 TKQSPTR|HK 0.114 . PCHAS_1205800 33 QSPTRHK|YE 0.063 . PCHAS_1205800 53 DLDPVSK|VV 0.074 . PCHAS_1205800 60 VVNSVVK|SI 0.130 . PCHAS_1205800 92 GQTGVMK|TL 0.065 . PCHAS_1205800 96 VMKTLPR|HH 0.074 . PCHAS_1205800 104 HPYHVYR|ES 0.157 . PCHAS_1205800 116 GQTPLTR|SE 0.121 . PCHAS_1205800 127 LLVDVMR|LQ 0.091 . PCHAS_1205800 140 TYDILSR|QD 0.071 . PCHAS_1205800 145 SRQDIMK|KY 0.082 . PCHAS_1205800 146 RQDIMKK|YI 0.122 . PCHAS_1205800 149 IMKKYIK|KS 0.063 . PCHAS_1205800 150 MKKYIKK|SF 0.146 . PCHAS_1205800 156 KSFQYHK|NC 0.061 . PCHAS_1205800 183 WVMSLQK|NL 0.059 . PCHAS_1205800 189 KNLNWMK|SN 0.075 . PCHAS_1205800 198 ISMASSK|LK 0.064 . PCHAS_1205800 200 MASSKLK|EL 0.080 . PCHAS_1205800 204 KLKELNK|AS 0.060 . PCHAS_1205800 216 NVLNYVK|KK 0.054 . PCHAS_1205800 217 VLNYVKK|KY 0.132 . PCHAS_1205800 218 LNYVKKK|YN 0.130 . PCHAS_1205800 221 VKKKYNK|SD 0.078 . PCHAS_1205800 227 KSDESPK|KC 0.068 . PCHAS_1205800 228 SDESPKK|CK 0.086 . PCHAS_1205800 230 ESPKKCK|VV 0.080 . PCHAS_1205800 234 KCKVVLK|-- 0.073 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1205800 ATGCAAAGCAAAGAAAACTTAGGAAGTAGAGAGTCTATATCTTCAGACAATAATGGTTCA GGACCATCTGAAACTAAACAATCTCCTACAAGACATAAGTATGAGGCTAACTCAAGCATG GTTTATTTAAATATTTATGATTTAGATCCTGTTTCAAAAGTTGTCAATTCTGTTGTAAAA TCTATTGGAACAGGCGCCTTTCATGCTGGCGTTGAAGTCTATGGCTTCGAATATTCCTTT GGCTACATACCAGGTGGTCAAACAGGAGTAATGAAAACGCTACCCAGACACCATCCCTAT CATGTTTATCGTGAAAGCATTCCTATGGGTCAAACCCCATTAACGAGAAGCGAAGTTGAT CTCCTCGTCGATGTTATGAGGCTCCAGTGGATCGGAAACACCTACGATATATTATCAAGG CAAGATATTATGAAAAAATATATTAAAAAAAGTTTCCAATATCATAAAAATTGTTTAAAC TTTGCCGACTACTTTTGCAACTTACTAGATGTTGGAAGCATACCCGAATGGGTAATGAGC TTACAAAAAAACTTAAACTGGATGAAGTCAAATATTAGTATGGCATCTAGTAAATTAAAG GAACTAAATAAGGCTTCTGGGTTACCAAATGTTTTAAATTATGTTAAGAAAAAGTACAAT AAAAGTGATGAAAGCCCCAAAAAATGTAAAGTTGTTTTAAAATAA
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  • Fasta :-

    MQSKENLGSRESISSDNNGSGPSETKQSPTRHKYEANSSMVYLNIYDLDPVSKVVNSVVK SIGTGAFHAGVEVYGFEYSFGYIPGGQTGVMKTLPRHHPYHVYRESIPMGQTPLTRSEVD LLVDVMRLQWIGNTYDILSRQDIMKKYIKKSFQYHKNCLNFADYFCNLLDVGSIPEWVMS LQKNLNWMKSNISMASSKLKELNKASGLPNVLNYVKKKYNKSDESPKKCKVVLK

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_120580028 SETKQSPTRH0.995unspPCHAS_1205800225 SKSDESPKKC0.995unsp

PCHAS_120580      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India