PCHAS_1214400 | methionine aminopeptidase 1b, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1214400OTHER0.9999970.0000000.000003
No Results

  • Fasta :-

    >PCHAS_1214400 MSDNTKQCDSNSNKDCNNVSKSSDAKKKEELESKKCNNTHENSTSFKREDESAGIEKARE NNLVCKGCGENLTKKLSCPVCLKNKINSYFCSQECFKRSWKEHSKMHPSEKENNEKEADK ESKKVEKNNYTEVTKELLPQNYDPTNRKYWIYDSHLRNFLSFNFSGNIRPWPISKMNYVP DHIDKPDYAITSIPTSELKYKKKSDIYVNNSDEIERIKEACILGRKTLDYAHSLVSPGVT TDEIDKKVHDFIIKNNAYPSPLNYYEFPKSCCTSVNEIVCHGIPDYRPLKNGDIINIDIS VYYKGVHADLNETYFVGENISNEAKQLVETCYFSLMEAIKKCKPGMLYKNLGNIIDAYVS KKHFSVVRTYSGHGVGKLFHSNPTIPHFRKNKAVGIMKPGHVFTIEPMINEGHYADVLWP DKWTSATADGKLSAQFEHTLLVTQTGVEILTKRLPDSPSLGFDTKDDLYII
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1214400.fa Sequence name : PCHAS_1214400 Sequence length : 471 VALUES OF COMPUTED PARAMETERS Coef20 : 3.462 CoefTot : 0.112 ChDiff : 3 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.553 0.882 -0.059 0.471 MesoH : -0.803 -0.014 -0.501 0.157 MuHd_075 : 16.565 7.963 4.481 1.782 MuHd_095 : 32.271 18.822 11.966 5.159 MuHd_100 : 30.494 18.275 11.490 4.896 MuHd_105 : 19.907 12.746 8.309 3.332 Hmax_075 : -12.900 -7.100 -2.731 -2.310 Hmax_095 : -4.800 -1.600 -0.745 -0.690 Hmax_100 : 0.600 1.100 1.124 -0.090 Hmax_105 : -10.600 -4.300 -1.315 -1.280 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9284 0.0716 DFMC : 0.8595 0.1405
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 471 PCHAS_1214400 MSDNTKQCDSNSNKDCNNVSKSSDAKKKEELESKKCNNTHENSTSFKREDESAGIEKARENNLVCKGCGENLTKKLSCPV 80 CLKNKINSYFCSQECFKRSWKEHSKMHPSEKENNEKEADKESKKVEKNNYTEVTKELLPQNYDPTNRKYWIYDSHLRNFL 160 SFNFSGNIRPWPISKMNYVPDHIDKPDYAITSIPTSELKYKKKSDIYVNNSDEIERIKEACILGRKTLDYAHSLVSPGVT 240 TDEIDKKVHDFIIKNNAYPSPLNYYEFPKSCCTSVNEIVCHGIPDYRPLKNGDIINIDISVYYKGVHADLNETYFVGENI 320 SNEAKQLVETCYFSLMEAIKKCKPGMLYKNLGNIIDAYVSKKHFSVVRTYSGHGVGKLFHSNPTIPHFRKNKAVGIMKPG 400 HVFTIEPMINEGHYADVLWPDKWTSATADGKLSAQFEHTLLVTQTGVEILTKRLPDSPSLGFDTKDDLYII 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1214400 6 -MSDNTK|QC 0.064 . PCHAS_1214400 14 CDSNSNK|DC 0.082 . PCHAS_1214400 21 DCNNVSK|SS 0.106 . PCHAS_1214400 26 SKSSDAK|KK 0.082 . PCHAS_1214400 27 KSSDAKK|KE 0.101 . PCHAS_1214400 28 SSDAKKK|EE 0.105 . PCHAS_1214400 34 KEELESK|KC 0.057 . PCHAS_1214400 35 EELESKK|CN 0.104 . PCHAS_1214400 47 ENSTSFK|RE 0.074 . PCHAS_1214400 48 NSTSFKR|ED 0.174 . PCHAS_1214400 57 ESAGIEK|AR 0.069 . PCHAS_1214400 59 AGIEKAR|EN 0.100 . PCHAS_1214400 66 ENNLVCK|GC 0.090 . PCHAS_1214400 74 CGENLTK|KL 0.059 . PCHAS_1214400 75 GENLTKK|LS 0.090 . PCHAS_1214400 83 SCPVCLK|NK 0.056 . PCHAS_1214400 85 PVCLKNK|IN 0.062 . PCHAS_1214400 97 CSQECFK|RS 0.061 . PCHAS_1214400 98 SQECFKR|SW 0.329 . PCHAS_1214400 101 CFKRSWK|EH 0.147 . PCHAS_1214400 105 SWKEHSK|MH 0.061 . PCHAS_1214400 111 KMHPSEK|EN 0.082 . PCHAS_1214400 116 EKENNEK|EA 0.070 . PCHAS_1214400 120 NEKEADK|ES 0.068 . PCHAS_1214400 123 EADKESK|KV 0.096 . PCHAS_1214400 124 ADKESKK|VE 0.081 . PCHAS_1214400 127 ESKKVEK|NN 0.072 . PCHAS_1214400 135 NYTEVTK|EL 0.060 . PCHAS_1214400 147 NYDPTNR|KY 0.080 . PCHAS_1214400 148 YDPTNRK|YW 0.074 . PCHAS_1214400 157 IYDSHLR|NF 0.066 . PCHAS_1214400 169 NFSGNIR|PW 0.090 . PCHAS_1214400 175 RPWPISK|MN 0.062 . PCHAS_1214400 185 VPDHIDK|PD 0.065 . PCHAS_1214400 199 IPTSELK|YK 0.061 . PCHAS_1214400 201 TSELKYK|KK 0.087 . PCHAS_1214400 202 SELKYKK|KS 0.101 . PCHAS_1214400 203 ELKYKKK|SD 0.170 . PCHAS_1214400 216 NSDEIER|IK 0.085 . PCHAS_1214400 218 DEIERIK|EA 0.065 . PCHAS_1214400 225 EACILGR|KT 0.101 . PCHAS_1214400 226 ACILGRK|TL 0.067 . PCHAS_1214400 246 TTDEIDK|KV 0.067 . PCHAS_1214400 247 TDEIDKK|VH 0.101 . PCHAS_1214400 254 VHDFIIK|NN 0.053 . PCHAS_1214400 269 NYYEFPK|SC 0.091 . PCHAS_1214400 287 HGIPDYR|PL 0.080 . PCHAS_1214400 290 PDYRPLK|NG 0.104 . PCHAS_1214400 304 DISVYYK|GV 0.109 . PCHAS_1214400 325 NISNEAK|QL 0.065 . PCHAS_1214400 340 SLMEAIK|KC 0.066 . PCHAS_1214400 341 LMEAIKK|CK 0.080 . PCHAS_1214400 343 EAIKKCK|PG 0.060 . PCHAS_1214400 349 KPGMLYK|NL 0.084 . PCHAS_1214400 361 IDAYVSK|KH 0.073 . PCHAS_1214400 362 DAYVSKK|HF 0.138 . PCHAS_1214400 368 KHFSVVR|TY 0.111 . PCHAS_1214400 377 SGHGVGK|LF 0.071 . PCHAS_1214400 389 PTIPHFR|KN 0.105 . PCHAS_1214400 390 TIPHFRK|NK 0.092 . PCHAS_1214400 392 PHFRKNK|AV 0.305 . PCHAS_1214400 398 KAVGIMK|PG 0.059 . PCHAS_1214400 422 DVLWPDK|WT 0.062 . PCHAS_1214400 431 SATADGK|LS 0.069 . PCHAS_1214400 452 GVEILTK|RL 0.059 . PCHAS_1214400 453 VEILTKR|LP 0.101 . PCHAS_1214400 465 SLGFDTK|DD 0.070 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1214400 ATGTCTGATAATACGAAGCAGTGTGATAGTAATAGCAATAAGGACTGCAACAATGTAAGC AAGTCAAGTGATGCAAAAAAGAAGGAAGAATTAGAAAGCAAAAAATGTAACAACACTCAT GAAAATTCCACATCATTTAAAAGAGAAGATGAAAGTGCTGGAATAGAAAAAGCGCGTGAG AATAATTTAGTATGTAAAGGATGTGGGGAAAATCTAACGAAAAAATTGAGTTGCCCTGTA TGTTTAAAAAACAAAATAAACAGCTATTTTTGTAGCCAAGAATGTTTTAAACGCTCTTGG AAAGAACATTCTAAAATGCATCCAAGTGAAAAGGAAAATAATGAAAAAGAAGCAGATAAA GAATCAAAAAAAGTTGAAAAAAATAATTATACAGAAGTAACAAAAGAATTATTGCCCCAA AATTATGACCCTACTAATAGAAAATATTGGATTTATGATAGCCATTTAAGAAATTTTTTA AGTTTTAATTTTAGTGGAAATATAAGACCATGGCCTATATCCAAAATGAATTATGTACCT GATCATATTGACAAACCAGATTATGCCATTACTTCAATACCTACATCCGAATTGAAATAT AAAAAAAAAAGTGATATATATGTAAATAATAGTGATGAAATTGAACGAATAAAAGAAGCA TGTATATTAGGTAGGAAAACTTTAGATTATGCACATTCATTAGTTAGTCCAGGAGTAACA ACGGATGAGATAGATAAAAAAGTTCATGATTTTATAATTAAAAATAATGCATACCCATCT CCATTAAATTATTATGAATTTCCAAAATCATGTTGTACATCAGTAAATGAAATAGTATGT CATGGTATACCAGATTATAGACCCTTAAAAAACGGGGATATTATAAATATAGATATAAGT GTATATTATAAAGGTGTGCATGCCGATTTAAATGAAACATATTTTGTTGGTGAAAACATA TCAAACGAAGCTAAACAACTTGTAGAAACTTGTTATTTTTCATTAATGGAAGCAATTAAA AAATGTAAACCTGGTATGTTATATAAAAATCTTGGAAATATTATAGATGCTTATGTATCG AAAAAACATTTTTCAGTTGTTCGTACATATTCAGGGCATGGGGTAGGAAAATTATTTCAT TCAAATCCAACTATACCTCATTTTAGAAAAAATAAAGCAGTAGGAATAATGAAACCAGGT CATGTATTTACAATTGAACCTATGATTAATGAAGGTCATTATGCAGATGTTTTATGGCCA GATAAATGGACAAGTGCAACTGCTGATGGAAAATTATCAGCACAATTCGAGCACACCTTG TTAGTTACTCAAACTGGAGTTGAAATATTAACAAAAAGACTTCCCGATTCCCCAAGCCTA GGATTTGACACAAAGGATGACCTATACATTATATGA
  • Download Fasta

  • Fasta :-

    MSDNTKQCDSNSNKDCNNVSKSSDAKKKEELESKKCNNTHENSTSFKREDESAGIEKARE NNLVCKGCGENLTKKLSCPVCLKNKINSYFCSQECFKRSWKEHSKMHPSEKENNEKEADK ESKKVEKNNYTEVTKELLPQNYDPTNRKYWIYDSHLRNFLSFNFSGNIRPWPISKMNYVP DHIDKPDYAITSIPTSELKYKKKSDIYVNNSDEIERIKEACILGRKTLDYAHSLVSPGVT TDEIDKKVHDFIIKNNAYPSPLNYYEFPKSCCTSVNEIVCHGIPDYRPLKNGDIINIDIS VYYKGVHADLNETYFVGENISNEAKQLVETCYFSLMEAIKKCKPGMLYKNLGNIIDAYVS KKHFSVVRTYSGHGVGKLFHSNPTIPHFRKNKAVGIMKPGHVFTIEPMINEGHYADVLWP DKWTSATADGKLSAQFEHTLLVTQTGVEILTKRLPDSPSLGFDTKDDLYII

  • title: active site
  • coordinates: H281,D298,D309,H373,E406,E437
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_121440099 SCFKRSWKEH0.997unsp

PCHAS_121440      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India