PCHAS_1226200 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1226200OTHER0.9998320.0001550.000013
No Results

  • Fasta :-

    >PCHAS_1226200 MGNVINKMIFNVPHEGFYEKLDIDFIYIETEDNEKIAAHYINRNNLLTVLFCHGNSENIY MLYDYFYEVSETWNVNILLYDYPGYGESTGTPTEENMYKSGYAVYDYMVNTLNIKPETII LYGRSIGSCAAVDIAINRKVKGVILQSAILSLFNICFKTRYILPFDSLCNIKKIDMIPCY VFFIHGMNDKIVPFYHGLALYEKCKMKVCPYWVVNGKHNDVELIDNNKFNENIKFFLNFL NNS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1226200.fa Sequence name : PCHAS_1226200 Sequence length : 243 VALUES OF COMPUTED PARAMETERS Coef20 : 2.984 CoefTot : -1.257 ChDiff : -6 ZoneTo : 14 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.941 1.618 0.146 0.524 MesoH : -0.281 0.806 -0.203 0.302 MuHd_075 : 14.160 11.582 4.442 3.414 MuHd_095 : 38.569 28.690 12.593 8.233 MuHd_100 : 28.205 22.080 10.467 6.292 MuHd_105 : 14.111 13.314 6.973 3.857 Hmax_075 : 10.267 13.417 0.601 5.787 Hmax_095 : 19.200 20.800 3.816 6.760 Hmax_100 : 17.600 16.200 3.255 6.140 Hmax_105 : 8.400 13.100 1.161 4.920 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9625 0.0375 DFMC : 0.9746 0.0254
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 243 PCHAS_1226200 MGNVINKMIFNVPHEGFYEKLDIDFIYIETEDNEKIAAHYINRNNLLTVLFCHGNSENIYMLYDYFYEVSETWNVNILLY 80 DYPGYGESTGTPTEENMYKSGYAVYDYMVNTLNIKPETIILYGRSIGSCAAVDIAINRKVKGVILQSAILSLFNICFKTR 160 YILPFDSLCNIKKIDMIPCYVFFIHGMNDKIVPFYHGLALYEKCKMKVCPYWVVNGKHNDVELIDNNKFNENIKFFLNFL 240 NNS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1226200 7 MGNVINK|MI 0.084 . PCHAS_1226200 20 HEGFYEK|LD 0.062 . PCHAS_1226200 35 ETEDNEK|IA 0.058 . PCHAS_1226200 43 AAHYINR|NN 0.069 . PCHAS_1226200 99 TEENMYK|SG 0.102 . PCHAS_1226200 115 VNTLNIK|PE 0.058 . PCHAS_1226200 124 TIILYGR|SI 0.143 . PCHAS_1226200 138 VDIAINR|KV 0.122 . PCHAS_1226200 139 DIAINRK|VK 0.094 . PCHAS_1226200 141 AINRKVK|GV 0.228 . PCHAS_1226200 158 LFNICFK|TR 0.059 . PCHAS_1226200 160 NICFKTR|YI 0.096 . PCHAS_1226200 172 DSLCNIK|KI 0.064 . PCHAS_1226200 173 SLCNIKK|ID 0.083 . PCHAS_1226200 190 IHGMNDK|IV 0.066 . PCHAS_1226200 203 GLALYEK|CK 0.064 . PCHAS_1226200 205 ALYEKCK|MK 0.058 . PCHAS_1226200 207 YEKCKMK|VC 0.060 . PCHAS_1226200 217 YWVVNGK|HN 0.071 . PCHAS_1226200 228 ELIDNNK|FN 0.065 . PCHAS_1226200 234 KFNENIK|FF 0.067 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1226200 ATGGGGAATGTTATAAATAAAATGATCTTTAATGTTCCGCACGAAGGATTTTATGAAAAA TTAGATATAGATTTTATTTATATTGAAACAGAAGATAACGAAAAAATAGCAGCACATTAT ATTAATAGGAATAACTTACTAACCGTTTTGTTTTGCCATGGAAATAGTGAAAATATTTAC ATGCTGTATGACTATTTTTACGAAGTATCAGAGACATGGAATGTAAATATATTATTGTAT GATTACCCTGGATATGGGGAAAGCACAGGAACACCAACCGAAGAAAATATGTACAAAAGT GGATATGCAGTTTATGATTATATGGTAAATACTTTAAACATAAAGCCAGAAACCATTATT TTATACGGAAGGTCTATAGGATCATGTGCAGCTGTGGATATAGCAATTAACAGGAAAGTA AAAGGTGTAATCCTGCAAAGTGCTATATTGTCATTATTCAATATATGTTTTAAAACTAGG TATATTTTACCATTTGATTCCTTATGTAACATTAAAAAGATTGATATGATACCCTGCTAT GTCTTTTTTATTCATGGAATGAATGATAAAATTGTCCCATTTTATCATGGATTAGCTTTA TATGAAAAATGCAAAATGAAGGTGTGCCCCTATTGGGTTGTCAATGGAAAACATAATGAT GTTGAATTAATTGATAATAACAAATTCAACGAAAACATCAAATTTTTCTTAAATTTTTTA AATAATTCATAA
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  • Fasta :-

    MGNVINKMIFNVPHEGFYEKLDIDFIYIETEDNEKIAAHYINRNNLLTVLFCHGNSENIY MLYDYFYEVSETWNVNILLYDYPGYGESTGTPTEENMYKSGYAVYDYMVNTLNIKPETII LYGRSIGSCAAVDIAINRKVKGVILQSAILSLFNICFKTRYILPFDSLCNIKKIDMIPCY VFFIHGMNDKIVPFYHGLALYEKCKMKVCPYWVVNGKHNDVELIDNNKFNENIKFFLNFL NNS

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PCHAS_122620      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India